mRNA_H-paniculata_contig1367.2257.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1367.2257.1
Unique NamemRNA_H-paniculata_contig1367.2257.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 9.080e-69
Identity = 116/260 (44.62%), Postives = 143/260 (55.00%), Query Frame = 1
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQ--------------------------GPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 702
            DDLS + W+E     TARL  + +L WC   G P V+VSDT  HF N ++  L   LG E  F+V NS WSNGT + M REV+ T   VL E  R +R+W   VP VQWALNTA+R     TPY +MFG APRT  S L  +SG+ W ++ LD  + + Q                            A   G  P F VGDY + ARVR+ G  PKL  TWTGPWRVV     HVY VQ+IV G ++DVH  R+R YA+
Sbjct:   73 DDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYAD 332          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 1.340e-64
Identity = 116/260 (44.62%), Postives = 143/260 (55.00%), Query Frame = 1
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQ--------------------------GPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 702
            DDLS + W+E     TARL  + +L WC   G P V+VSDT  HF N ++  L   LG E  F+V NS WSNGT + M RE++ T   VL E  R VR+W   VP VQWALNTA+R     TPY +MFG APRT  S L  +SG+ W ++ LD  + + Q                            A   G  P F VGDY + ARVR+ G  PKL  TWTGPWRVV     HVY VQ+IV G ++DVH  R+R YA+
Sbjct: 1296 DDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYAD 1555          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 4.930e-49
Identity = 101/240 (42.08%), Postives = 138/240 (57.50%), Query Frame = 1
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQGP-ANGAGPWPNFEVGDYFLTARVR-----KLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 702
            DD+S +VWLE     TA L  + +L WC + G P V+VSDT  HF N +++ L   LG +  FSV NS WSNGT + M REV+ T   ++ E     R+W   VP VQWALNTA R   G TPY +MFG APRT LS L  ++G EW+V+ LD    R++      A    + EV D    +R +     ++GS+P  +    G + +V     HVY VQ+IV+G ++DVH  R+R YA+
Sbjct: 1398 DDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFV---VGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYAD 1634          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.870e-27
Identity = 79/241 (32.78%), Postives = 116/241 (48.13%), Query Frame = 1
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRT-MLSLLTDNSGDEWRVED------LDVPQERMQGPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 702
            DD S++VWL      TA    E ++ W   FG  R +VSD   HF N+++  L   LGA H F+     W+NGTV+++NREV+     +L+E      EWP  + +VQ  LN +        P   + G AP T M  L   N  D   V D      LD  Q R             F+VGD+ L A V +     KL   W GP +V    S  ++++++++TG  ++VH  R++ YA+
Sbjct:  153 DDASKFVWLMPTDAATADNTFECLMTWFASFGVVRWWVSDQGTHFKNKVIEGLQHALGAHHHFTTARCPWANGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKIVQMVLNHS--------PCSAIDGVAPVTAMTGLKAMNPTDPLAVPDPIQVATLDEIQRRKHHNGKKGTTMAQFDVGDFVLYADVWQHARA-KLRVKWCGPAQVTAATSNWIFEIENLITGERREVHASRLKFYAD 384          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A2P4XGX1_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XGX1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.400e-25
Identity = 75/241 (31.12%), Postives = 116/241 (48.13%), Query Frame = 1
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLL-----TDNSG--DEWRVEDLDVPQERMQGPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 702
            DD S++VWL      TA    E ++RW  +FG  R +VSD   HF N++L  L   LGA   F+     W+NGTV+++NREV+     +L+E      EWP  +   Q  LN +        P   + G AP T ++ L     TD     D  +V  LD  Q R             F++GD+ L A V +     KL   W GP +V    S  +++++++++G  ++VH  R++ Y +
Sbjct:   61 DDTSKFVWLMPTDAATADNTFECLMRWFAMFGVVRWWVSDQGTHFKNKVLEGLQHALGAHRHFTTARCTWTNGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKNFQMVLNHS--------PCSAIDGVAPVTAMTGLKVMDPTDPLAVPDPIQVATLDDFQRRKHHNGIKGTTMAQFDMGDFVLYADVWQYARA-KLRVKWCGPAQVTAAASNGIFEIENLISGERREVHAGRLKFYTD 292          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: W2IAR5_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2IAR5_PHYPR)

HSP 1 Score: 101 bits (252), Expect = 4.910e-21
Identity = 69/230 (30.00%), Postives = 112/230 (48.70%), Query Frame = 1
Query:   55 LATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLG-------------PTPYQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQGPANGAGP-WPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 702
            +AT  IL W   FG P V+VS    HF N +++ L+  L ++  F +    W NG+V+ +NR+++     +  E     ++W   VP+VQ +LN    P LG             P+P    +    + ++ +  ++   +  +  L      M  P    G    NF+VGDY L +RV +     KL+ TW GP+RVV     H ++++ +VTG   DVHE R++ YA+
Sbjct:  431 VATAAILDWHSRFGAPPVWVSGNGSHFKNEVVAELSKRLKSQQNFILAYCPWINGSVERVNRDILQVLRVMTLEYKVLTKDWEYLVPLVQASLNHTALPSLGNRAPVELFTGLQCPSPLAEFYHPGSKKLVIVPKNSDAIDKHLAQLRQSLCTMHQPIKDRGDNVVNFDVGDYVLRSRVDEK-KRNKLLVTWQGPYRVVRA-DVHSFRIRHLVTGCELDVHESRLKFYAD 658          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6A4EJU1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4EJU1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.770e-21
Identity = 78/267 (29.21%), Postives = 121/267 (45.32%), Query Frame = 1
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGP----TPYQLMFGGAPRTMLSLLTDNSGDE----WRVEDLDVPQERMQGPANGAGP------------------------WPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDV-HEVRMRTYAE 702
            D +S YV L + L+ TA  A + ++ W   FG    +VSD   HF N+++  L   LGA+H F    + W+NGTV+++NREV+     +L+E    +R+WPA +P+VQ ALN+     LG     T +  + GG   T  S+L     +E    W  +++    + ++   +G                              F  GD+ L A      S  KL   W GP R+V   +   ++VQDIV      V H  R++ Y +
Sbjct:   16 DGMSGYVELVACLQATADTACQALIDWFKRFGVVHQWVSDQGAHFRNQIVERLQRALGAQHHFVTAYTPWANGTVEVVNREVLKCMKALLSERRLAIRDWPALLPVVQAALNSMPADRLGGKSPLTAFTALPGGTQLT--SILHPRDPEEASIHWVAQEIQEHLDSVRVALDGLHAEMVNASEKRRRAARERHARRQGVKLQKFSEGDFVLAATATGR-SGNKLALVWRGPKRIVRVLNDFTFEVQDIVQPFEMSVRHASRLQLYRD 279          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6A3Z230_9STRA (RNA-directed DNA polymerase n=12 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z230_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.020e-20
Identity = 83/267 (31.09%), Postives = 121/267 (45.32%), Query Frame = 1
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGP----TPYQLMFGGAPRTMLSLLTDNSGDEWRV--------EDLDVPQERMQG-------------------PANGAG-PWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDV-HEVRMRTYAE 702
            D +S YV L + L+ TA  A + ++ W   FG    +VSD   HF N+++  L   LGA+H F    + W+NGTV+++NREV+     +L+E    +R+WPA +P+VQ ALN+     LG     T +  + GG   T  S+L     +E  +        E LD  +  M G                    A   G     F  GD+ L A      S  KL   W GP R+V   +   ++VQDIV      V H  R++ Y +
Sbjct: 1017 DGMSGYVELVACLQATADTACQALIDWFKRFGVVHQWVSDQGAHFRNQIVERLQRALGAQHHFVTAYTPWANGTVEVVNREVLKCMKALLSERRLAIRDWPALLPVVQAALNSMPADRLGGKSPLTAFTALPGGTQLT--SILHPRDPEEASIHWVAQEIQEHLDSVRVAMDGLHAEMVNASEKRRRSARERHARRQGVKLQKFSEGDFVLAATATGR-SGNKLALVWRGPKRIVRVLNDFTFEVQDIVQPFEMSVRHASRLQLYRD 1280          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: H3H3G8_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3G8_PHYRM)

HSP 1 Score: 100 bits (249), Expect = 1.380e-20
Identity = 80/264 (30.30%), Postives = 122/264 (46.21%), Query Frame = 1
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALN--TAHRPWLGPTP---YQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQGPANGAGP------------------------WPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDV-HEVRMRTYAE 702
            D +S +V L S  + TA  A + ++ W   FG    +VSD   HF N+++ LL   LG +H F+   + W+NGTVK++NRE++     +L+E    VR+WPA +P+VQ ALN  TA R   G TP   +  + GGA    L L      +EW    +     +++   +G                            P F  GD+ L A      S  KL   W GP R++   + + ++VQDIV      + H  R++ Y +
Sbjct: 1028 DGMSGFVELISFADATADNAYQGLIDWFKRFGVEPQWVSDQGAHFRNQIIELLQRALGVQHHFTTAYTPWANGTVKVVNREILKCVRALLSERKLHVRDWPAVLPVVQAALNGMTADR-LNGVTPLTAFTALPGGAQLRHL-LHPHAPTEEWVTAAVQAHLAKVRAALDGMHAELVDASEKRRLAARARHARHQGVRLPKFSEGDFVLVATATDR-SGHKLALIWRGPKRIIRALNDYTFEVQDIVVPFAVVIRHASRLQLYRD 1288          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6A3QSE0_9STRA (Integrase catalytic domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QSE0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.050e-20
Identity = 75/252 (29.76%), Postives = 110/252 (43.65%), Query Frame = 1
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGP----TPYQLMFGGA-------PRTMLSLLTDNSGDEWRVEDLDVPQERMQGPANGAGP------------------------WPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIV 651
            D +S YV L + L+ TA  A   ++ W   FG    + SD   HF N+++  L   LGA H F    + W+NGTV+++NREV+     +L+E    VR+WPA +P+VQ ALN      LG     T +  + GG+       PR ++  L      EW  +DL    E ++   +G                              F  GD+ L A      S  KL   W GP R+V   +   ++V DI+
Sbjct:   16 DGMSGYVELVACLQATADTAYRALIDWFKRFGVVHQWTSDQGAHFRNQIIEQLQRALGAHHHFVTAYTPWANGTVEVVNREVLKAMKALLSERRLFVRDWPALLPVVQAALNGMPANRLGGKTPLTAFTALAGGSQLTSILHPRELVDTLV-----EWVTQDLQAHLEEVRVALDGLHAEMVDASEKRRRAARERHSLRPGVKLQKFSEGDFVLAATATGR-SGNKLALLWRGPKRIVKALNDFTFEVTDII 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVS6_9PHAE9.080e-6944.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE1.340e-6444.62Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE4.930e-4942.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4XSG7_9STRA1.870e-2732.78Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2P4XGX1_9STRA1.400e-2531.12Integrase catalytic domain-containing protein n=1 ... [more]
W2IAR5_PHYPR4.910e-2130.00Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A6A4EJU1_9STRA5.770e-2129.21Uncharacterized protein n=3 Tax=Phytophthora fraga... [more]
A0A6A3Z230_9STRA1.020e-2031.09RNA-directed DNA polymerase n=12 Tax=Phytophthora ... [more]
H3H3G8_PHYRM1.380e-2030.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3QSE0_9STRA2.050e-2029.76Integrase catalytic domain-containing protein n=4 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1367contigH-paniculata_contig1367:11667..12455 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.0
Seed ortholog evalue2.9e-24
Seed eggNOG ortholog4792.ETI57041
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size705
Cds size705
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929084.5389616-CDS-H-paniculata_contig1367:11666..118851622929084.5389616-CDS-H-paniculata_contig1367:11666..11885Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1367 11667..11885 -
1691480725.1474447-CDS-H-paniculata_contig1367:11666..118851691480725.1474447-CDS-H-paniculata_contig1367:11666..11885Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1367 11667..11885 -
1622929084.553907-CDS-H-paniculata_contig1367:11969..124551622929084.553907-CDS-H-paniculata_contig1367:11969..12455Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1367 11970..12455 -
1691480725.1597157-CDS-H-paniculata_contig1367:11969..124551691480725.1597157-CDS-H-paniculata_contig1367:11969..12455Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1367 11970..12455 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1367.2257.1prot_H-paniculata_contig1367.2257.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1367 11667..12455 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1367.2257.1

>prot_H-paniculata_contig1367.2257.1 ID=prot_H-paniculata_contig1367.2257.1|Name=mRNA_H-paniculata_contig1367.2257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp
DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLL
SLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREW
PAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLLTDNSGDEWRVE
DLDVPQERMQGPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPW
RVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE*
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mRNA from alignment at H-paniculata_contig1367:11667..12455-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1367.2257.1 ID=mRNA_H-paniculata_contig1367.2257.1|Name=mRNA_H-paniculata_contig1367.2257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=789bp|location=Sequence derived from alignment at H-paniculata_contig1367:11667..12455- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGACCTTAGCCGCTACGTGTGGCTGGAGTCGGCACTAGAATATACCGC TAGATTGGCGACCGAGACCATTCTGCGGTGGTGTGTGGTGTTCGGCCCTC CGAGGGTGTTCGTCAGCGACACCGTTCGTCACTTCAACAACCGTCTCTTG AGTCTGCTGGCGGACGGGCTGGGGGCCGAGCACTGTTTCTCCGTGGGCAA CTCTGCGTGGTCAAACGGCACAGTGAAGCTGATGAACCGCGAGGTGATAA ACACGTTTAACACCGTGCTGAACGAGGCAAACCGCCCGGTCCGCGAATGG CCGGCGGCGGTGCCGATGGTCCAGTGGGCCCTGAACACGGCGCATCGGCC ATGGCTGGGACCCACCCCGTACCAGCTCATGTTCGGTGGTGCACCGCGTA CCATGCTCTCGCTCCTCACAGACAACAGCGGTGATGAGTGGAGGGTAGAG GACCTTGATGTGCCACAGGAGCGCATGCAGGGGCCGGTCGAGGACTGGGT TAAGTCTCAGGAGGCAGCGCCACGCGAAGAGTTGCAGCGCGTTCGGCGCT ACCGTGAGCGCAAACGGGAGGCGAATGGCGCGGGACCTTGGCCGAATTTT GAGGTTGGCGACTATTTCCTGACAGCACGGGTTCGCAAGCTTGGAAGCGT CCCGAAGCTCATCGGCACGTGGACCGGCCCGTGGCGAGTGGTCGGGTGTG GCTCCGCGCATGTTTATAAGGTCCAAGACATTGTGACGGGGGTCATCAAG GACGTGCATGAAGTTCGGATGCGAACGTACGCGGAATAA
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Coding sequence (CDS) from alignment at H-paniculata_contig1367:11667..12455-

>mRNA_H-paniculata_contig1367.2257.1 ID=mRNA_H-paniculata_contig1367.2257.1|Name=mRNA_H-paniculata_contig1367.2257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at H-paniculata_contig1367:11667..12455- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGACCTTAGCCGCTACGTGTGGCTGGAGTCGGCACTAGAATATACCGC
TAGATTGGCGACCGAGACCATTCTGCGGTGGTGTGTGGTGTTCGGCCCTC
CGAGGGTGTTCGTCAGCGACACCGTTCGTCACTTCAACAACCGTCTCTTG
AGTCTGCTGGCGGACGGGCTGGGGGCCGAGCACTGTTTCTCCGTGGGCAA
CTCTGCGTGGTCAAACGGCACAGTGAAGCTGATGAACCGCGAGGTGATAA
ACACGTTTAACACCGTGCTGAACGAGGCAAACCGCCCGGTCCGCGAATGG
CCGGCGGCGGTGCCGATGGTCCAGTGGGCCCTGAACACGGCGCATCGGCC
ATGGCTGGGACCCACCCCGTACCAGCTCATGTTCGGTGGTGCACCGCGTA
CCATGCTCTCGCTCCTCACAGACAACAGCGGTGATGAGTGGAGGGTAGAG
GACCTTGATGTGCCACAGGAGCGCATGCAGGGGCCGGACGACCTTAGCCG
CTACGTGTGGCTGGAGTCGGCACTAGAATATACCGCTAGATTGGCGACCG
AGACCATTCTGCGGTGGTGTGTGGTGTTCGGCCCTCCGAGGGTGTTCGTC
AGCGACACCGTTCGTCACTTCAACAACCGTCTCTTGAGTCTGCTGGCGGA
CGGGCTGGGGGCCGAGCACTGTTTCTCCGTGGGCAACTCTGCGTGGTCAA
ACGGCACAGTGAAGCTGATGAACCGCGAGGTGATAAACACGTTTAACACC
GTGCTGAACGAGGCAAACCGCCCGGTCCGCGAATGGCCGGCGGCGGTGCC
GATGGTCCAGTGGGCCCTGAACACGGCGCATCGGCCATGGCTGGGACCCA
CCCCGTACCAGCTCATGTTCGGTGGTGCACCGCGTACCATGCTCTCGCTC
CTCACAGACAACAGCGGTGATGAGTGGAGGGTAGAGGACCTTGATGTGCC
ACAGGAGCGCATGCAGGGGCCGGCGAATGGCGCGGGACCTTGGCCGAATT
TTGAGGTTGGCGACTATTTCCTGACAGCACGGGTTCGCAAGCTTGGAAGC
GTCCCGAAGCTCATCGGCACGTGGACCGGCCCGTGGCGAGTGGTCGGGTG
TGGCTCCGCGCATGTTTATAAGGTCCAAGACATTGTGACGGGGGTCATCA
AGGACGTGCATGAAGTTCGGATGCGAACGTACGCGGAATAAGCGAATGGC
GCGGGACCTTGGCCGAATTTTGAGGTTGGCGACTATTTCCTGACAGCACG
GGTTCGCAAGCTTGGAAGCGTCCCGAAGCTCATCGGCACGTGGACCGGCC
CGTGGCGAGTGGTCGGGTGTGGCTCCGCGCATGTTTATAAGGTCCAAGAC
ATTGTGACGGGGGTCATCAAGGACGTGCATGAAGTTCGGATGCGAACGTA
CGCGGAATAA
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