mRNA_H-paniculata_contig13669.2256.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	2
Model size	1678
Cds size	1677
Stop	0
Start	0

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig13669:3628..5323-
coding sequence from alignment at H-paniculata_contig13669:3628..5323-

protein sequence of mRNA_H-paniculata_contig13669.2256.1

>prot_H-paniculata_contig13669.2256.1 ID=prot_H-paniculata_contig13669.2256.1|Name=mRNA_H-paniculata_contig13669.2256.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=559bp
QGSTSQGEGDSAPQIATATVRDSVGSEGEEGGKGETSDSDGDSGSVSTRL
DRSSPLPMTLLSASGSSSWPGHSLTSAADTVADASDRFSRLTPSVSSEIV
VEQQRATARIATTAAAAAAISPTPTGVNDVIVVGDRANRCLRRGSDMDGV
GLLVEPCAASLVVPTFGIGAAAAGTSGVDGGVRLLIAESKEEEQCIEEKV
PEPVDNNSEAEDCKSDRATVVLGAADDIDVDDYSGRLENCKGGEEGDGDV
TRQHQQQRQVGEGEGKCDESSREVGTGTTSASVVAINHSSSSRSSNSNSP
TGNDNSGEGSTTNQQKEEEEEEEEDNNNEDTEEAAWPLLQLPLSAWRRIT
ATTNVAATTAAAENRSESPSPSTVQASPDVPEEPQNQEHNRAELLPPPTG
LDGVTHPQQSVAKAETSVGASVLDGSAADCEVDPTGCGGGDGDAIANEEV
LRQDTARETAETNANGRADDGGGGDGRADEGSATETTFSAAAAAAVATSI
SADSRVAMAQLPAPDNTTAGTRSTTVSPSHAPAPAPTSSVSERPVSGTGV
EPAGTAAAA

mRNA from alignment at H-paniculata_contig13669:3628..5323-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig13669.2256.1 ID=mRNA_H-paniculata_contig13669.2256.1|Name=mRNA_H-paniculata_contig13669.2256.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1696bp|location=Sequence derived from alignment at H-paniculata_contig13669:3628..5323- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGAAGCACTTCCCAAGGAGAAGGCGACAGTGCCCCACAAATAGCTAC
CGCGACTGTGAGGGATAGTGTCGGCAGCGAAGGGGAAGAAGGAGGGAAAG
GAGAGACGAGTGACAGCGACGGTGACAGCGGGAGCGTATCGACAAGATTA
GATCGGAGTTCTCCATTGCCGATGACACTGTTGTCAGCTTCAGGCTCTTC
GTCGTGGCCGGGGCATTCTCTCACCTCTGCTGCTGATACTGTTGCTGATG
CTTCGGATCGTTTTAGCCGGTTGACACCTAGTGTGTCCTCCGAAATTGTC
GTAGAACAGCAGCGAGCAACAGCAAGGATAGCGACAACAGCAGCAGCAGC
AGCAGCAATAAGTCCAACTCCGACGGGAGTCAACGACGTCATTGTCGTTG
GAGATAGGGCCAACCGTTGCCTGAGGCGCGGCAGCGACATGGATGGTGTT
GGTCTGCTCGTGGAACCCTGTGCTGCTTCTCTCGTGGTTCCAACTTTTGG
CATTGGTGCTGCTGCTGCTGGTACTAGTGGTGTTGACGGTGGTGTTCGAT
TATTGATCGCGGAGAGTAAGGAAGAGGAACAGTGTATAGAGGAGAAGGTT
CCCGAGCCGGTTGATAACAATAGCGAAGCGGAAGATTGCAAAAGTGACCG
TGCTACTGTTGTTCTTGGTGCTGCTGATGATATTGATGTTGACGATTATT
CTGGACGCCTTGAAAATTGCAAGGGTGGCGAAGAAGGCGACGGAGATGTG
ACAAGGCAGCACCAGCAGCAGCGACAGGTGGGAGAAGGGGAAGGGAAATG
CGACGAGAGCTCGCGTGAGGTTGGCACAGGAACAACAAGTGCATCAGTAG
TAGCGATCAACCACAGCAGCAGCAGTAGAAGCAGCAACAGCAATAGTCCC
ACTGGCAACGACAACTCAGGGGAAGGTAGCACTACCAACCAGCGCACAGA
CGAGAAGAAAGAAAAAGAGGAGGAGGAGGAAGAGGAGGAAGACAATAATA
ACGAAGATACTGAGGAAGCTGCTTGGCCGCTTCTGCAACTCCCTCTCTCT
GCGTGGCGACGAATCACTGCTACGACTAACGTCGCCGCAACCACTGCGGC
CGCGGAAAACCGATCTGAGTCGCCTTCGCCATCCACCGTGCAAGCCTCAC
CAGATGTGCCAGAAGAGCCACAAAATCAAGAACACAATCGAGCGGAGCTT
CTGCCACCGCCGACCGGCCTCGATGGAGTTACACACCCACAACAATCCGT
TGCAAAAGCAGAAACAAGCGTGGGCGCAAGTGTGTTGGATGGATCAGCGG
CTGATTGCGAGGTTGACCCCACAGGGTGCGGCGGCGGGGATGGCGACGCC
ATCGCTAACGAGGAAGTCTTGAGGCAGGACACAGCACGTGAGACAGCAGA
AACCAATGCCAACGGCCGCGCTGATGACGGTGGCGGCGGTGACGGCAGAG
CCGACGAAGGCTCGGCGACAGAGACAACATTCTCGGCTGCTGCTGCAGCA
GCAGTGGCAACCTCCATTTCCGCCGATTCACGCGTAGCGATGGCCCAACT
TCCCGCACCAGATAATACTACTGCCGGAACGAGAAGTACAACGGTCTCGC
CATCGCATGCACCGGCACCAGCGCCGACCTCTTCAGTTTCCGAAAGACCG
GTCTCCGGAACGGGCGTCGAACCGGCGGGAACAGCGGCAGCGGCGG

Coding sequence (CDS) from alignment at H-paniculata_contig13669:3628..5323-

>mRNA_H-paniculata_contig13669.2256.1 ID=mRNA_H-paniculata_contig13669.2256.1|Name=mRNA_H-paniculata_contig13669.2256.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3354bp|location=Sequence derived from alignment at H-paniculata_contig13669:3628..5323- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGAAGCACTTCCCAAGGAGAAGGCGACAGTGCCCCACAAATAGCTAC
CGCGACTGTGAGGGATAGTGTCGGCAGCGAAGGGGAAGAAGGAGGGAAAG
GAGAGACGAGTGACAGCGACGGTGACAGCGGGAGCGTATCGACAAGATTA
GATCGGAGTTCTCCATTGCCGATGACACTGTTGTCAGCTTCAGGCTCTTC
GTCGTGGCCGGGGCATTCTCTCACCTCTGCTGCTGATACTGTTGCTGATG
CTTCGGATCGTTTTAGCCGGTTGACACCTAGTGTGTCCTCCGAAATTGTC
GTAGAACAGCAGCGAGCAACAGCAAGGATAGCGACAACAGCAGCAGCAGC
AGCAGCAATAAGTCCAACTCCGACGGGAGTCAACGACGTCATTGTCGTTG
GAGATAGGGCCAACCGTTGCCTGAGGCGCGGCAGCGACATGGATGGTGTT
GGTCTGCTCGTGGAACCCTGTGCTGCTTCTCTCGTGGTTCCAACTTTTGG
CATTGGTGCTGCTGCTGCTGGTACTAGTGGTGTTGACGGTGGTGTTCGAT
TATTGATCGCGGAGAGTAAGGAAGAGGAACAGTGTATAGAGGAGAAGGTT
CCCGAGCCGGTTGATAACAATAGCGAAGCGGAAGATTGCAAAAGTGACCG
TGCTACTGTTGTTCTTGGTGCTGCTGATGATATTGATGTTGACGATTATT
CTGGACGCCTTGAAAATTGCAAGGGTGGCGAAGAAGGCGACGGAGATGTG
ACAAGGCAGCACCAGCAGCAGCGACAGGTGGGAGAAGGGGAAGGGAAATG
CGACGAGAGCTCGCGTGAGGTTGGCACAGGAACAACAAGTGCATCAGTAG
TAGCGATCAACCACAGCAGCAGCAGTAGAAGCAGCAACAGCAATAGTCCC
ACTGGCAACGACAACTCAGGGGAAGGTAGCACTACCAACCAGCCAGGGAA
GCACTTCCCAAGGAGAAGGCGACAGTGCCCCACAAATAGCTACCGCGACT
GTGAGGGATAGTGTCGGCAGCGAAGGGGAAGAAGGAGGGAAAGGAGAGAC
GAGTGACAGCGACGGTGACAGCGGGAGCGTATCGACAAGATTAGATCGGA
GTTCTCCATTGCCGATGACACTGTTGTCAGCTTCAGGCTCTTCGTCGTGG
CCGGGGCATTCTCTCACCTCTGCTGCTGATACTGTTGCTGATGCTTCGGA
TCGTTTTAGCCGGTTGACACCTAGTGTGTCCTCCGAAATTGTCGTAGAAC
AGCAGCGAGCAACAGCAAGGATAGCGACAACAGCAGCAGCAGCAGCAGCA
ATAAGTCCAACTCCGACGGGAGTCAACGACGTCATTGTCGTTGGAGATAG
GGCCAACCGTTGCCTGAGGCGCGGCAGCGACATGGATGGTGTTGGTCTGC
TCGTGGAACCCTGTGCTGCTTCTCTCGTGGTTCCAACTTTTGGCATTGGT
GCTGCTGCTGCTGGTACTAGTGGTGTTGACGGTGGTGTTCGATTATTGAT
CGCGGAGAGTAAGGAAGAGGAACAGTGTATAGAGGAGAAGGTTCCCGAGC
CGGTTGATAACAATAGCGAAGCGGAAGATTGCAAAAGTGACCGTGCTACT
GTTGTTCTTGGTGCTGCTGATGATATTGATGTTGACGATTATTCTGGACG
CCTTGAAAATTGCAAGGGTGGCGAAGAAGGCGACGGAGATGTGACAAGGC
AGCACCAGCAGCAGCGACAGGTGGGAGAAGGGGAAGGGAAATGCGACGAG
AGCTCGCGTGAGGTTGGCACAGGAACAACAAGTGCATCAGTAGTAGCGAT
CAACCACAGCAGCAGCAGTAGAAGCAGCAACAGCAATAGTCCCACTGGCA
ACGACAACTCAGGGGAAGGTAGCACTACCAACCAGCAAAAAGAGGAGGAG
GAGGAAGAGGAGGAAGACAATAATAACGAAGATACTGAGGAAGCTGCTTG
GCCGCTTCTGCAACTCCCTCTCTCTGCGTGGCGACGAATCACTGCTACGA
CTAACGTCGCCGCAACCACTGCGGCCGCGGAAAACCGATCTGAGTCGCCT
TCGCCATCCACCGTGCAAGCCTCACCAGATGTGCCAGAAGAGCCACAAAA
TCAAGAACACAATCGAGCGGAGCTTCTGCCACCGCCGACCGGCCTCGATG
GAGTTACACACCCACAACAATCCGTTGCAAAAGCAGAAACAAGCGTGGGC
GCAAGTGTGTTGGATGGATCAGCGGCTGATTGCGAGGTTGACCCCACAGG
GTGCGGCGGCGGGGATGGCGACGCCATCGCTAACGAGGAAGTCTTGAGGC
AGGACACAGCACGTGAGACAGCAGAAACCAATGCCAACGGCCGCGCTGAT
GACGGTGGCGGCGGTGACGGCAGAGCCGACGAAGGCTCGGCGACAGAGAC
AACATTCTCGGCTGCTGCTGCAGCAGCAGTGGCAACCTCCATTTCCGCCG
ATTCACGCGTAGCGATGGCCCAACTTCCCGCACCAGATAATACTACTGCC
GGAACGAGAAGTACAACGGTCTCGCCATCGCATGCACCGGCACCAGCGCC
GACCTCTTCAGTTTCCGAAAGACCGGTCTCCGGAACGGGCGTCGAACCGG
CGGGAACAGCGGCAGCGGCGAAAAAGAGGAGGAGGAGGAAGAGGAGGAAG
ACAATAATAACGAAGATACTGAGGAAGCTGCTTGGCCGCTTCTGCAACTC
CCTCTCTCTGCGTGGCGACGAATCACTGCTACGACTAACGTCGCCGCAAC
CACTGCGGCCGCGGAAAACCGATCTGAGTCGCCTTCGCCATCCACCGTGC
AAGCCTCACCAGATGTGCCAGAAGAGCCACAAAATCAAGAACACAATCGA
GCGGAGCTTCTGCCACCGCCGACCGGCCTCGATGGAGTTACACACCCACA
ACAATCCGTTGCAAAAGCAGAAACAAGCGTGGGCGCAAGTGTGTTGGATG
GATCAGCGGCTGATTGCGAGGTTGACCCCACAGGGTGCGGCGGCGGGGAT
GGCGACGCCATCGCTAACGAGGAAGTCTTGAGGCAGGACACAGCACGTGA
GACAGCAGAAACCAATGCCAACGGCCGCGCTGATGACGGTGGCGGCGGTG
ACGGCAGAGCCGACGAAGGCTCGGCGACAGAGACAACATTCTCGGCTGCT
GCTGCAGCAGCAGTGGCAACCTCCATTTCCGCCGATTCACGCGTAGCGAT
GGCCCAACTTCCCGCACCAGATAATACTACTGCCGGAACGAGAAGTACAA
CGGTCTCGCCATCGCATGCACCGGCACCAGCGCCGACCTCTTCAGTTTCC
GAAAGACCGGTCTCCGGAACGGGCGTCGAACCGGCGGGAACAGCGGCAGC
GGCG

mRNA_H-paniculata_contig13669.2256.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

ZOOM

x 1

POSITION

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