Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1379 |
| Cds size | 735 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13616.2233.1 >prot_H-paniculata_contig13616.2233.1 ID=prot_H-paniculata_contig13616.2233.1|Name=mRNA_H-paniculata_contig13616.2233.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp
MSISAHLGLGTRERCGVTTVAQSCIGFVCPLLKGALPARVQDRELFLHVR
GSHLRDAGEHVLVSRVHAETGGDTPPLRRRKARGSRTWRMRHLADPGRLK
MWDQEVRCRTTAAMVAHILVKCGVRHQRPIVRVRRGVPLPDLMSVATSKA
PRGPVLTLGQSRYPGKVSKTRAAATAAGVGNLGGSSSWKARHGLGSVLPA
ARAIAIRERADMCTSPLPWRHGSRTATCSTFRSRSCASPSRPRS* back to topmRNA from alignment at H-paniculata_contig13616:1292..2670+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig13616.2233.1 ID=mRNA_H-paniculata_contig13616.2233.1|Name=mRNA_H-paniculata_contig13616.2233.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1379bp|location=Sequence derived from alignment at H-paniculata_contig13616:1292..2670+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCCTCTCCCGCCCGTGCCGGCGTCGGCCTCGATCCCCCCGTCTCCGTCG
CCATGTCTATTTCTGCCCACCTGGGATTGGGCACCCGGGAACGGTGTGGG
GTAACCACCGTTGCCCAAAGCTGCATTGGCTTCGTGTGCCCACTGCTCAA
GGGTGCGCTCCCAGCCCGGGTGCAAGACCGCGAGCTATTCTTGCACGTGA
GGGGCTCCCATTTGCGAGACGCGGGAGAACATGTACTGGTATCGCGTGTA
CATGCTGAAACAGGGGGCGATACGCCGCCACTACGTCGTCGCAAGGCTAG
GGGCAGTAGAACCTGGCGTATGCGTCACCTGGCTGACCCAGGACGTCTCA
AAATGTGGGACCAGGAGGTACGATGTCGTACAACAGCGGCCATGGTGGCA
CACATATTGGTCAAATGTGGTGTGCGGCATCAGCGGCCGATTGTACGAGT
CCGCAGGGGGGTGCCACTTCCCGACCTCATGAGTGTGGCGACATCGAAGG
CCCCGCGAGGACCTGTGCTGACCCTTGGCCAGTCGAGGTACCCAGGGAAA
GTTTCGAAGACCAGAGCGGCCGCCACTGCCGCCGGGGTCGGTAATCTGGG
CGGCAGTTCTTCTTGGAAGGCTAGGCACGGCCTAGGGTCAGTTCTCCCGG
CCGCCAGGGCGATCGCCATACGGGAGAGGGCCGATATGTGCACCAGCCCG
CTTCCATGGCGGCACGGTAGCCGCACCGCGACTTGCTCAACATTCAGGAG
CCGTTCCTGCGCGTCGCCGTCTCGTCCCCGGTCATAGATTAAGGATATCC
CGCAGTACAGGCAGCTCTCGTCGGGGTTATCTTGTTCCCATTCCTCCCTG
TGGCTGTTCCAATCAAAGGGGCCGTCATAGTGCGGCAGAGGCCCGTCCGT
CCTTGCACTCACCCGTGTCTACGCCGCCCTAACCCGTTGCCGCTGTGGTA
CGTTCGTAATTCTCGCCTGCAGGTACGCTAGCAGCCCGAAGATAGATCCG
CGCTGTCCCAGATCACGCATCACCCCTGCACCTCACACGTCGGCACGGTC
GTCCTCTCCCCCATCCGCTACCCTGGCCGCGTCTTCCTCCGCTTCCTTCA
CAGCCCACTCAGGGTGAGCAAACCCTCTCCGGTATTCGACCCATTTGTTG
GGCTGCACGCCTCGATGGTAGGCCTGGCGCGTCGCTTCGCCCAACTCCAC
CCCATCCCGGGGCGCGCTCACCAAGGGGGGTGCTGGACCCAGCCGCTGCG
CGCACCTGCGGTGGAGGGAGTATTGCCGTTACGGAGTTGCGTCGCTAATC
GCCACCGGCGTTTCGCACATGGCGCACTTCGCCGTTTCATCCATCTCTAA
GCCCATCGCTTGGTTAGTGGTGCTCCCCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig13616:1292..2670+ >mRNA_H-paniculata_contig13616.2233.1 ID=mRNA_H-paniculata_contig13616.2233.1|Name=mRNA_H-paniculata_contig13616.2233.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig13616:1292..2670+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTATTTCTGCCCACCTGGGATTGGGCACCCGGGAACGGTGTGGGGT
AACCACCGTTGCCCAAAGCTGCATTGGCTTCGTGTGCCCACTGCTCAAGG
GTGCGCTCCCAGCCCGGGTGCAAGACCGCGAGCTATTCTTGCACGTGAGG
GGCTCCCATTTGCGAGACGCGGGAGAACATGTACTGGTATCGCGTGTACA
TGCTGAAACAGGGGGCGATACGCCGCCACTACGTCGTCGCAAGGCTAGGG
GCAGTAGAACCTGGCGTATGCGTCACCTGGCTGACCCAGGACGTCTCAAA
ATGTGGGACCAGGAGGTACGATGTCGTACAACAGCGGCCATGGTGGCACA
CATATTGGTCAAATGTGGTGTGCGGCATCAGCGGCCGATTGTACGAGTCC
GCAGGGGGGTGCCACTTCCCGACCTCATGAGTGTGGCGACATCGAAGGCC
CCGCGAGGACCTGTGCTGACCCTTGGCCAGTCGAGGTACCCAGGGAAAGT
TTCGAAGACCAGAGCGGCCGCCACTGCCGCCGGGGTCGGTAATCTGGGCG
GCAGTTCTTCTTGGAAGGCTAGGCACGGCCTAGGGTCAGTTCTCCCGGCC
GCCAGGGCGATCGCCATACGGGAGAGGGCCGATATGTGCACCAGCCCGCT
TCCATGGCGGCACGGTAGCCGCACCGCGACTTGCTCAACATTCAGGAGCC
GTTCCTGCGCGTCGCCGTCTCGTCCCCGGTCATAGATGTCTATTTCTGCC
CACCTGGGATTGGGCACCCGGGAACGGTGTGGGGTAACCACCGTTGCCCA
AAGCTGCATTGGCTTCGTGTGCCCACTGCTCAAGGGTGCGCTCCCAGCCC
GGGTGCAAGACCGCGAGCTATTCTTGCACGTGAGGGGCTCCCATTTGCGA
GACGCGGGAGAACATGTACTGGTATCGCGTGTACATGCTGAAACAGGGGG
CGATACGCCGCCACTACGTCGTCGCAAGGCTAGGGGCAGTAGAACCTGGC
GTATGCGTCACCTGGCTGACCCAGGACGTCTCAAAATGTGGGACCAGGAG
GTACGATGTCGTACAACAGCGGCCATGGTGGCACACATATTGGTCAAATG
TGGTGTGCGGCATCAGCGGCCGATTGTACGAGTCCGCAGGGGGGTGCCAC
TTCCCGACCTCATGAGTGTGGCGACATCGAAGGCCCCGCGAGGACCTGTG
CTGACCCTTGGCCAGTCGAGGTACCCAGGGAAAGTTTCGAAGACCAGAGC
GGCCGCCACTGCCGCCGGGGTCGGTAATCTGGGCGGCAGTTCTTCTTGGA
AGGCTAGGCACGGCCTAGGGTCAGTTCTCCCGGCCGCCAGGGCGATCGCC
ATACGGGAGAGGGCCGATATGTGCACCAGCCCGCTTCCATGGCGGCACGG
TAGCCGCACCGCGACTTGCTCAACATTCAGGAGCCGTTCCTGCGCGTCGC
CGTCTCGTCCCCGGTCATAG back to top
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