prot_H-paniculata_contig136.2222.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig136.2222.1
Unique Nameprot_H-paniculata_contig136.2222.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length251
Homology
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BLAST of mRNA_H-paniculata_contig136.2222.1 vs. uniprot
Match: D8LMJ3_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ3_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 5.100e-25
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0 
Query:    1 TKQRLKYHQGKQRFQAGRSIFSSTRVQEAVNEEWIKGGHRRRAMRMLLLFLAYMTVFTASSVLNSGRNEPHGFHLSMSVRTVLETGSELW 90
             +QRL Y Q KQR+ AGRSIFSS RVQEAV+EEWI+GGHR RA+R+LLL+L Y+ VFT  SVLNSGRN PHG+HL++         S+ W
Sbjct:  486 ARQRLVYQQSKQRYHAGRSIFSSARVQEAVHEEWIQGGHRIRALRVLLLYLVYLVVFTLCSVLNSGRNMPHGYHLTIWYEGDTLVNSQGW 575
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig136.2222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMJ3_ECTSI5.100e-2562.22Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 101..232
e-value: 3.0E-6
score: 26.2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..250
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..63
NoneNo IPR availableTMHMMTMhelixcoord: 46..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig136contigH-paniculata_contig136:11110..14237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig136.2222.1mRNA_H-paniculata_contig136.2222.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig136 11110..14237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig136.2222.1 ID=prot_H-paniculata_contig136.2222.1|Name=mRNA_H-paniculata_contig136.2222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp
TKQRLKYHQGKQRFQAGRSIFSSTRVQEAVNEEWIKGGHRRRAMRMLLLF
LAYMTVFTASSVLNSGRNEPHGFHLSMSVRTVLETGSELWEDDSTSVGPV
HIAENIWEWLEGPVLDILADNQNSSWYDKDILVDASGWKRLRVLGGARLS
QWRTRDSSCKVSGPIGDMYGNYCFTDYCGEDSNGRAICSGASSDTRSFGP
GRKYRYEQNAHTHTTTGSFGVYGRGAFVEYLTQGNTTLAIDEIRALEVLV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel