Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1403 |
| Cds size | 759 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13562.2201.1 >prot_H-paniculata_contig13562.2201.1 ID=prot_H-paniculata_contig13562.2201.1|Name=mRNA_H-paniculata_contig13562.2201.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp
MRHSSRNAGALSPTRGGGGGGGGRSELDREEDFARPARSGSNSSIGSMDG
IKDRIGRPAVSSTQNHAGAAELIRLQKQQQQQTVSATERERRSYHHLHQP
YYHQQEHDEYDHDEYDHDRGNAVVADGGGGGRGGLDRDSLGSATGVGAGS
SARPHRLPSASSSSSVAALAAAAAAATATRRPVPPPGPSVPTPKSRTGTG
GEKLYPIEGLGPVLEPRRPRPSPGSIAGPQPWAGQGMKTRRGGVGDVAGG
GAT back to topmRNA from alignment at H-paniculata_contig13562:943..2345+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig13562.2201.1 ID=mRNA_H-paniculata_contig13562.2201.1|Name=mRNA_H-paniculata_contig13562.2201.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1403bp|location=Sequence derived from alignment at H-paniculata_contig13562:943..2345+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAAAAAAGAGAGAGCAAGCACTACATCCTATCGGGCGCCAAGGGTCCGT
GTGCAGGGGCTTGATTCCAGACTTCCACGCATCTGGGTGATTACTTGTTT
ATTCCTGCTGCCCTTTTTGCCGGAGGACCGACTCTCAGACGGAGAACAAA
AAGGTGGAGCTGCGTCTGTGTGTGAGCTTCTTCGTTTAATGCTGGTACGT
AGTACAGCAGTTGGTTGGAACGACGGCAGCACAGCGAACAAACTGCTGCA
ATCGCCCTGAACGCAGTTGAGGCAAGGCCAGCTCGGGAAACGGCGGCTGC
GGAAGAAGAAACAATATCATTAGCAACTACGACAGTGGGCTGTCGGCTAC
GCGTGAGCGTCGCCGGTCGACCACTAACACCCAACATTCACGACGGGCGC
CTATCAGTCCACGGGTGTGCCCGGCAAAGGTGTGAGCGGGCCACCACAAT
CCGACAACGACGCTGCACCTACCAGCAGCGGCAGCAGCGGCAGCAACAGC
AGTAGCACCCGACGACAGTTATCGCAAGACCATAATAGTATTAGTAGTAT
CAGTAGCATCGGTAGCAATCCGACCCGTCGCCCTGTCCGCACAATTTTGC
CGCCAGTATCAGAGCAGGTTCAGTTGACGCCAAGAACGCTGACCATGCGG
CATAGCTCCAGAAACGCCGGTGCACTGTCACCAACACGGGGCGGCGGCGG
CGGCGGCGGCGGCCGCAGCGAGTTAGACAGAGAGGAAGACTTCGCACGCC
CTGCGCGCAGCGGCAGCAACAGTAGCATAGGTAGTATGGATGGCATAAAG
GATCGTATCGGCCGCCCGGCGGTAAGCAGCACGCAGAACCACGCTGGTGC
CGCCGAGTTAATAAGGCTGCAAAAGCAACAGCAGCAACAGACAGTCAGTG
CGACGGAGAGAGAACGACGTTCTTATCATCATCTTCATCAACCTTACTAC
CACCAACAAGAACACGACGAGTATGATCACGACGAGTACGACCATGACCG
AGGTAATGCGGTCGTTGCAGACGGCGGCGGCGGCGGGAGGGGCGGCTTAG
ACCGGGATAGCCTAGGAAGCGCAACCGGAGTTGGCGCAGGATCGTCCGCC
CGCCCTCATCGTTTGCCTTCCGCCTCTTCTTCCTCTAGCGTCGCCGCCCT
CGCCGCGGCGGCCGCGGCGGCCACCGCTACAAGACGCCCCGTTCCGCCCC
CGGGACCGAGCGTGCCGACTCCAAAGAGCCGAACGGGGACGGGCGGCGAA
AAGCTTTACCCCATTGAAGGCTTGGGTCCCGTGCTAGAGCCGAGACGTCC
CAGGCCTTCACCCGGCAGCATCGCAGGGCCGCAGCCTTGGGCAGGGCAAG
GTATGAAGACGCGGAGAGGAGGAGTAGGAGACGTGGCGGGAGGTGGAGCG
ACG back to topCoding sequence (CDS) from alignment at H-paniculata_contig13562:943..2345+ >mRNA_H-paniculata_contig13562.2201.1 ID=mRNA_H-paniculata_contig13562.2201.1|Name=mRNA_H-paniculata_contig13562.2201.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at H-paniculata_contig13562:943..2345+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGCATAGCTCCAGAAACGCCGGTGCACTGTCACCAACACGGGGCGG
CGGCGGCGGCGGCGGCGGCCGCAGCGAGTTAGACAGAGAGGAAGACTTCG
CACGCCCTGCGCGCAGCGGCAGCAACAGTAGCATAGGTAGTATGGATGGC
ATAAAGGATCGTATCGGCCGCCCGGCGGTAAGCAGCACGCAGAACCACGC
TGGTGCCGCCGAGTTAATAAGGCTGCAAAAGCAACAGCAGCAACAGACAG
TCAGTGCGACGGAGAGAGAACGACGTTCTTATCATCATCTTCATCAACCT
TACTACCACCAACAAGAACACGACGAGTATGATCACGACGAGTACGACCA
TGACCGAGGTAATGCGGTCGTTGCAGACGGCGGCGGCGGCGGGAGGGGCG
GCTTAGACCGGGATAGCCTAGGAAGCGCAACCGGAGTTGGCGCAGGATCG
TCCGCCCGCCCTCATCGTTTGCCTTCCGCCTCTTCTTCCTCTAGCGTCGC
CGCCCTCGCCGCGGCGGCCGCGGCGGCCACCGCTACAAGACGCCCCGTTC
CGCCCCCGGGACCGAGCGTGCCGACTCCAAAGAGCCGAACGGGGACGGGC
GGCGAAAAGCTTTACCCCATTGAAGGCTTGGGTCCCGTGCTAGAGCCGAG
ACGTCCCAGGCCTTCACCCGGCAGCATCGCAGGGCCGCAGCCTTGGGCAG
GGCAAGGTATGAAGACGCGGAGAGGAGGAGTAGGAGACGTGGCGGGAGGT
GGAGCGACGATGCGGCATAGCTCCAGAAACGCCGGTGCACTGTCACCAAC
ACGGGGCGGCGGCGGCGGCGGCGGCGGCCGCAGCGAGTTAGACAGAGAGG
AAGACTTCGCACGCCCTGCGCGCAGCGGCAGCAACAGTAGCATAGGTAGT
ATGGATGGCATAAAGGATCGTATCGGCCGCCCGGCGGTAAGCAGCACGCA
GAACCACGCTGGTGCCGCCGAGTTAATAAGGCTGCAAAAGCAACAGCAGC
AACAGACAGTCAGTGCGACGGAGAGAGAACGACGTTCTTATCATCATCTT
CATCAACCTTACTACCACCAACAAGAACACGACGAGTATGATCACGACGA
GTACGACCATGACCGAGGTAATGCGGTCGTTGCAGACGGCGGCGGCGGCG
GGAGGGGCGGCTTAGACCGGGATAGCCTAGGAAGCGCAACCGGAGTTGGC
GCAGGATCGTCCGCCCGCCCTCATCGTTTGCCTTCCGCCTCTTCTTCCTC
TAGCGTCGCCGCCCTCGCCGCGGCGGCCGCGGCGGCCACCGCTACAAGAC
GCCCCGTTCCGCCCCCGGGACCGAGCGTGCCGACTCCAAAGAGCCGAACG
GGGACGGGCGGCGAAAAGCTTTACCCCATTGAAGGCTTGGGTCCCGTGCT
AGAGCCGAGACGTCCCAGGCCTTCACCCGGCAGCATCGCAGGGCCGCAGC
CTTGGGCAGGGCAAGGTATGAAGACGCGGAGAGGAGGAGTAGGAGACGTG
GCGGGAGGTGGAGCGACG back to top
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