prot_H-paniculata_contig13449.2147.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: D8LFT0_ECTSI (TFIIH subunit (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT0_ECTSI) HSP 1 Score: 347 bits (890), Expect = 5.590e-112 Identity = 222/293 (75.77%), Postives = 228/293 (77.82%), Query Frame = 0
Query: 1 MKWKVRGGLMGTASGGQSLRHSGQSDSMPGGRMRDVHDARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGGDXXXXXXXXXXXXKRKNPSGADGGATDDMFLRFAAQEAEREKXXXXXXXXXXXXXXREAG--------------GRLETGSVDPLVDLTSQWGDHHTREVDDSDPVEERSEAAKKRKQVVGKFNRHARLV 279
MKWK RGGL+GTASGGQSLRH DSMPGGRMR+VHDARQRAALLAGD+VLTAQYREMVDG VVTEEEFWESRRRTLAEE AK SR GTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRG XXXXXXXXXXXX XXXXXXXXXXXXXX GRLE+GSVDP+VDLTSQWGDHH REVDDSDP EE SEAA KRK+VVGKFNRHARLV
Sbjct: 152 MKWKTRGGLLGTASGGQSLRHR---DSMPGGRMRNVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLESGSVDPMVDLTSQWGDHHAREVDDSDPTEELSEAANKRKEVVGKFNRHARLV 441
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: A0A6H5JXC6_9PHAE (BSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC6_9PHAE) HSP 1 Score: 294 bits (753), Expect = 6.680e-92 Identity = 208/301 (69.10%), Postives = 213/301 (70.76%), Query Frame = 0
Query: 1 MKWKVRGGLMGTASGGQSLRHSGQSDSMPGGRMRDVHDARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGGDXXXXXXXXXXXXKRKNPSGADGGATDDMFLRFAAQEAEREKXXXXXXXXXXXXXX--------------------REAGGRLET--GSVDPLVDLTSQWGDHHTREVDDSDPVEERSEAAKKRKQVVGKFNRHARLV 279
MKWK RGGL+GTASGGQSLRHS MPGGRMRDVHDARQRAALLAGD+VLTAQYREMVDG VVTEEEFWESRRRTLAEE AK SR GTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRG XXXXXXXXXXXX XXXXXXXXXXXXXX R+A R G D V G +R VDDSDP EE SEAA KRK+VVGKFNRHARLV
Sbjct: 81 MKWKTRGGLLGTASGGQSLRHS-----MPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRQARERKRGPYGGPDFAV-----GGSPRSRGVDDSDPTEELSEAANKRKEVVGKFNRHARLV 371
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: A0A835YZ40_9STRA (BSD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ40_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.370e-36 Identity = 118/251 (47.01%), Postives = 143/251 (56.97%), Query Frame = 0
Query: 39 ARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGGDXXXXXXXXXXXXKRKNPSGADGGATDDMFLRFAAQ---------EAEREKXXXXXXXXXXXXXXREAGGRLE-TGSVDPLVDLTSQWGDHHTREVDDSDPVEERSEAAKKRKQVVGKFNRHARLV 279
A++RAALLA D VL AQY ++V+GGV+++ EFW RR L EAA +RR G S + +D V F+L R IH IF MYP V +AY+A VP E+SEKEFW KY QS Y+ RDRGG GA A DDMF RFAA+ XXXXXXXXXXXX A RL T VDP VDL +Q+ D+H+R VDD P EER+ AA + V+ + NRHA LV
Sbjct: 147 AQRRAALLARDAVLRAQYADVVEGGVLSDAEFWAGRRGMLEGEAAAARARRQGARSALGAD-VRPAVEGAKQVFRLTPRDIHQIFLMYPAVERAYKAKVPVELSEKEFWVKYFQSQYYTRDRGGA---------------AKAGGATISAGDDMFSRFAAEYEXXXXXXXXXXXXXXXXXXXXXXXXXRGNSAQQRLSGTEGVDPTVDLAAQFSDYHSRPVDDRGP-EERAGAADAQA-VIERLNRHAALV 379
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: A0A2P4XBN0_9STRA (General transcription factor IIH subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XBN0_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.670e-24 Identity = 57/126 (45.24%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 38 DARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGG 163
+ +QRAALLA + L Q+ EMV+ G+++EE+FW SRR +A EA+K ++ G S + +DL A+ +K+ LNA IH IF YP V+ AYQ VP +M+E EFW + +S YF+RDR G
Sbjct: 123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASK--RQKTGKTSAILTDLAADNEGGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 246
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: A0A421FK41_9STRA (BSD domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FK41_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.170e-23 Identity = 58/127 (45.67%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 38 DARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGG 163
+ +QRAALLA + L Q+ EMV+ G+++EE+FW SRR +A EA+K ++ G S + +DL A+ + G + K+ LNA IH IF YP V+ AYQ VP +M+E EFW + +S YF+RDR G
Sbjct: 102 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASK--RQKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 226
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: A0A3F2RJ52_9STRA (BSD domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJ52_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.910e-23 Identity = 58/127 (45.67%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 38 DARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGG 163
+ +QRAALLA + L Q+ EMV+ G+++EE+FW SRR +A EA+K ++ G S + +DL A+ + G + K+ LNA IH IF YP V+ AYQ VP +M+E EFW + +S YF+RDR G
Sbjct: 123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASK--RQKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 247
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: A0A662X0X0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0X0_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.010e-23 Identity = 58/127 (45.67%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 38 DARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGG 163
+ +QRAALLA + L Q+ EMV+ G+++EE+FW SRR +A EA+K ++ G S + +DL + + G + K+ LNA IH IF YP V+ AYQA VP +M+E EFW + +S YF+RDR G
Sbjct: 150 EIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLIAAEASK--RQKTGKTSAILTDLAGDNDTGGNVVKYNLNAEVIHQIFIQYPAVYMAYQAQVPDKMTETEFWGAFFKSKYFHRDRKAG 274
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: A0A024FZ08_9STRA (BSD domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ08_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.360e-23 Identity = 58/127 (45.67%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 38 DARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGG 163
+ +QRAALLA D L Q+ EMV+ G+++EE+FW++RR LA EA+K ++ G S + +DL + S G + K+ LNA IH IF YP + AYQ VP ++SE EFW+ + +S YF+RDR G
Sbjct: 131 EIKQRAALLASDTNLKRQHTEMVNQGLISEEDFWQARRHLLANEASK--RQKTGKTSSLLTDLAGKNESGGNVVKYNLNAEVIHQIFVQYPSIHLAYQDQVPDKLSETEFWSAFFKSKYFHRDRKAG 255
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: A0A0P1APW3_PLAHL (General transcription factor iih n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APW3_PLAHL) HSP 1 Score: 109 bits (272), Expect = 2.490e-23 Identity = 59/127 (46.46%), Postives = 82/127 (64.57%), Query Frame = 0
Query: 38 DARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGG 163
+ +QRAALLA + L Q+ EMV+ G+++EE+FW SRR +A EA+K ++ S + +DL A S G + K+ LNA IH IFT YP V+ AYQ VP +M+E EFW + +S YF+RDR G
Sbjct: 124 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASK--RQKTAKTSAILTDLAANNDSGGNVVKYNLNAEVIHQIFTQYPAVYMAYQEQVPDKMTETEFWGAFFKSKYFHRDRKAG 248
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Match: A0A0X7YIL8_GLOUL (Putative general transcription factor IIH subunit (Fragment) n=19 Tax=Globisporangium TaxID=1448052 RepID=A0A0X7YIL8_GLOUL) HSP 1 Score: 107 bits (266), Expect = 4.250e-23 Identity = 58/127 (45.67%), Postives = 82/127 (64.57%), Query Frame = 0
Query: 38 DARQRAALLAGDDVLTAQYREMVDGGVVTEEEFWESRRRTLAEEAAKVTSRRVGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGGG 163
+ +QRAALLA + L Q+ EMV+ G+++EE+FW SRR +A EA+K ++ G S + +DL + + G + K+ LNA IH IF YP V AYQA VP +M+E EFW + +S YF+RDR G
Sbjct: 37 EIKQRAALLAANPTLKRQHTEMVNEGLISEEDFWASRRHLIANEASK--RQKTGKTSAILTDLSGDNDTGGNVVKYNLNAEVIHQIFIQYPAVHLAYQAQVPDKMTETEFWGAFFKSKYFHRDRKAG 161 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13449.2147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig13449.2147.1 ID=prot_H-paniculata_contig13449.2147.1|Name=mRNA_H-paniculata_contig13449.2147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=279bpback to top |