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Homology
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A6H5K9V4_9PHAE (TFIID_20kDa domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9V4_9PHAE) HSP 1 Score: 199 bits (505), Expect = 1.110e-50 Identity = 101/133 (75.94%), Postives = 111/133 (83.46%), Query Frame = 3
Query: 231 AARPMGAHKPRHEHVVPQVEPEPKDAKLVGPMNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGNPSRSNSLREARTGRLKLEATIQAERA 629
AA+ M A KP H VVP VEPEPK+AKLVGPMNGMRLPALMKEVDP ++LH DTEELLLALAQDHIEGVA+AAVELA+HRNSDTVELQDLQLCLEKDWDMPWLGIG + + RE + GR +L I AERA
Sbjct: 383 AAKSMAAMKPLHPVVVPPVEPEPKEAKLVGPMNGMRLPALMKEVDPAYSLHPDTEELLLALAQDHIEGVAAAAVELAQHRNSDTVELQDLQLCLEKDWDMPWLGIGARKMAGAERETKVGRARLNTAIAAERA 515
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: F6WT81_CIOIN (Transcription initiation factor TFIID subunit 12 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6WT81_CIOIN) HSP 1 Score: 79.0 bits (193), Expect = 4.640e-13 Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 3
Query: 291 PEPKDAKLVGPMNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 602
P+ KD K+ +N RL L++E+DP L D EE+L+ + D IE V SA+ ELA+HRNS+T+E++DL+L L+K W++ G G+ P + + +A RL L
Sbjct: 76 PQEKDNKI---LNRQRLQELIREIDPAEQLDEDVEEMLMQITDDFIENVVSASCELAKHRNSNTLEVKDLKLHLDKQWNISIPGYGSEEIKPFKKPTTADAHKQRLAL 180
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: R4FLY8_RHOPR (Transcription initiation factor TFIID subunit 12 n=6 Tax=Triatominae TaxID=70999 RepID=R4FLY8_RHOPR) HSP 1 Score: 75.5 bits (184), Expect = 5.080e-12 Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 3
Query: 333 MRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 602
MRL L++EVDP L D E++LL +A D +E SAA LA+HR S TVE++DLQL LE++W+M G G P + +S+ EA R+ L
Sbjct: 70 MRLQDLVREVDPNEQLDEDVEDVLLHMADDFVESAISAACLLAKHRKSSTVEVKDLQLHLERNWNMWIPGFGTDELRPYKRSSVTEAHKQRMTL 163
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A8J6FS37_ELECQ (Transcription initiation factor TFIID subunit 12 n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6FS37_ELECQ) HSP 1 Score: 73.9 bits (180), Expect = 7.520e-12 Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 3
Query: 336 RLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 602
+L L++EVDP L D EE+LL +A D IE V SAA +LARHR S+T+E++D+QL LE+ W+M G G+ P + EA R+ L
Sbjct: 38 KLHDLVREVDPNEQLDEDVEEMLLQIADDFIESVVSAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMAL 130
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A2C9JVR7_BIOGL (Transcription initiation factor TFIID subunit 12 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JVR7_BIOGL) HSP 1 Score: 75.9 bits (185), Expect = 9.370e-12 Identity = 41/99 (41.41%), Postives = 62/99 (62.63%), Query Frame = 3
Query: 318 GPMNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 602
G ++ RL L+KEVDP + D E++LL +A D IE + SA+ +LARHR S+T+E +D+QLCL++ W+M G G+ P + + EA R+ L
Sbjct: 107 GVLDKARLRDLVKEVDPLEQMDDDVEDVLLQVADDFIENIVSASCQLARHRRSNTLEAKDVQLCLDRGWNMQVPGFGSEELRPYKKSITTEAHKQRMAL 205
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A6G1SBA2_9ACAR (Transcription initiation factor TFIID subunit 12 n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SBA2_9ACAR) HSP 1 Score: 73.2 bits (178), Expect = 9.410e-12 Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 3
Query: 321 PMNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGNPSRSNSLR---EARTGRLKL 602
P+ RL L+ EVDP+ L D EE+LL + +D I+ V S+A E+A+HRNS+T+E+ D++LCLE+ + + G G SR R EA R+ L
Sbjct: 9 PIEPKRLQDLVNEVDPDEQLDEDVEEVLLNIGEDFIDAVVSSACEIAKHRNSNTLEVGDVRLCLERKYKIWIPGFGGESRPTPKRFTSEAHKQRMAL 105
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A1E1WSY0_PECGO (Transcription initiation factor TFIID subunit 12 n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1WSY0_PECGO) HSP 1 Score: 74.7 bits (182), Expect = 1.080e-11 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 3
Query: 324 MNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 602
M+ RL L++EVDP L + EE+LL LA D I+ +AA LA+HR++ TVEL+D+QL LE+ W+M G GN P + ++ EA R+ L
Sbjct: 73 MSRPRLQELVREVDPTVQLDEEVEEMLLHLADDFIDSTLNAACSLAKHRHASTVELKDVQLTLERQWNMWIPGFGNDDIRPYKRAAVTEAHKQRMAL 169
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: V3Z331_LOTGI (Transcription initiation factor TFIID subunit 12 (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3Z331_LOTGI) HSP 1 Score: 72.8 bits (177), Expect = 1.120e-11 Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 3
Query: 336 RLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWL-GIGN----PSRSNSLREARTGRLKL 602
RL L+KEVDP L D EE+LL +A D IE V S+A ++A+HR S+T+E++D+QL LE+ W+M WL G G+ P + + EA R+ L
Sbjct: 18 RLQELVKEVDPLEQLDDDVEEVLLQVADDFIENVVSSACQIAKHRKSNTLEVKDVQLYLERTWNM-WLPGFGSEDVRPFKKACVTEAHKQRMAL 110
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A7J7X801_RHIFE (Transcription initiation factor TFIID subunit 12 n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=A0A7J7X801_RHIFE) HSP 1 Score: 72.8 bits (177), Expect = 1.120e-11 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 3
Query: 336 RLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 602
+L L++EVDP L D EE+LL +A D IE V +AA +LARHR S T+E++D+QL LE+ W+M G G+ P + EA R+ L
Sbjct: 18 KLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMAL 110
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A6A5FEQ6_PERFL (Transcription initiation factor TFIID subunit 12 n=2 Tax=Perca fluviatilis TaxID=8168 RepID=A0A6A5FEQ6_PERFL) HSP 1 Score: 72.4 bits (176), Expect = 1.130e-11 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 3
Query: 336 RLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 602
+L L++E+DP L D EE+LL +A D IE V +AA +LARHR S+T+E++D+QL LE+ W+M G G+ P + EA R+ L
Sbjct: 7 KLQDLVREIDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGYGSDEIRPFKKACTTEAHKQRMAL 99
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Metazoa |
| Seed ortholog score | 79.0 |
| Seed ortholog evalue | 2.8e-12 |
| Seed eggNOG ortholog | 7719.XP_002130711.1 |
| Preferred name | TAF12 |
| KEGG ko | ko:K03126 |
| KEGG Pathway | ko03022,map03022 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000123,GO:0000124,GO:0000125,GO:0000428,GO:0000988,GO:0000989,GO:0001076,GO:0001085,GO:0001102,GO:0001129,GO:0001132,GO:0003674,GO:0003676,GO:0003677,GO:0003712,GO:0003713,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0006139,GO:0006325,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006996,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010646,GO:0016043,GO:0016070,GO:0016569,GO:0016570,GO:0016573,GO:0016591,GO:0017025,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0022607,GO:0023051,GO:0030880,GO:0030914,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0033276,GO:0033613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0043933,GO:0043966,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051123,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0055029,GO:0060255,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070461,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901796,GO:1902493,GO:1902494,GO:1902531,GO:1902680,GO:1903506,GO:1903508,GO:1905368,GO:1990234,GO:2000112,GO:2001141 |
| EggNOG free text desc. | beta-galactosidase activity |
| EggNOG OGs | 39SFE@33154,3B9N1@33208,3D0XE@33213,47ZCJ@7711,COG5624@1,KOG1142@2759 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-19_003390.2 |
| COG Functional cat. | K |
| Best tax level | Chordata |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03021,ko03036 |
| Exons | 5 |
| Model size | 2729 |
| Cds size | 582 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1334.2090.1 >prot_H-paniculata_contig1334.2090.1 ID=prot_H-paniculata_contig1334.2090.1|Name=mRNA_H-paniculata_contig1334.2090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp
MGAHKPRHEHVVPQVEPEPKDAKLVGPMNGMRLPALMKEVDPEFTLHADT
EELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLG
IGNPSRSNSLREARTGRLKLEATIQAERAAVTAAATPSWRKKSSAKRKSE
AASAGSSGKKKTPLPTPSQAQAAGAAGGAGSGSNSNNPVPLDG* back to topmRNA from alignment at H-paniculata_contig1334:10840..21125+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1334.2090.1 ID=mRNA_H-paniculata_contig1334.2090.1|Name=mRNA_H-paniculata_contig1334.2090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10286bp|location=Sequence derived from alignment at H-paniculata_contig1334:10840..21125+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACTGCAACATCAGCGACATCTACCGTTTCAGCAACCCCGGAGCCAAGCG
TACCACCAGGTAGCGGCAACCGCAGCACAGCAACAGCAACAGGCGGCAGC
GGCCAGCAGCGCACAAACATCGGCTGTCCATGCAGCTGGTGTCGCAGCCT
CCTCAGGTTCTGCGAACGCACAATGGAAACCTGGACAGCAGGTGCTAGCG
ACAGGGGGCGTCGCCGCTAGCGGGAGCGCGGCAGCCCGCCCGATGGGGGC
GCACAAACCTCGGCACGAGCACGTTGTGCCGCAGGTAGAGCCGGAGCCGA
AGGATGCTAAGCTTGTGGGGCCAATGGTGAGATAACATATTTTTGTTTTT
TCGAGGCTGGAAGGCCTGGGAGGGGGTGTGGAGGGGGACGGGCGGAGGGG
GAGAGGGGGAAGGGTGCAAGCTTTACAAGGAAGTATTACTGTATCACTCG
CGTGTGTACTGCACGTAGACATGAATAAGTAATCACGTGGACGAAGGACA
CTCACCCCTAGCAGAACCTCCACCTTGCACCCACCAGGATTCTCCATCCT
ATGTAAATCAAGGCATTTGCCACAAATGGTAAAACTAAGCTCTAACGCTC
ATGTGGTGAGTCCATTGTACCTATGTTGAGGTTATGTAGCTGCCCTCTAA
TTTGATTTGTGTTGTGTACACTTATTAACAAAATTAGATTAAAAGAAAAG
GAGGGAGTCGGGGGAGAGGTAGAAAGAGTATCAAGTTAAGGTGGAAATAA
CTTTCTGTGGAAAACATGACACTAATCGGAAAACAAAATTTAGATACGCT
CGGCATCTTTCTTCAAGCTACTGGATTTCGTATACTCCACAAACTCAACA
AACCAAAGGGATGTACTCATGAAAACTCATGGCATAGTCTTTCGACCGTC
GACCTCGCATCACTGCAACGCCGACACGGAAAAAGTGGGCGGTGTCAGGT
TGTATACTTATCTGTACTGTTGTGCATATAAATAGACTGCGCTAGGCTGG
ACGCTTGGCTGTTTATGTCACCATACGAGACGAGAGCTTGCTACCGTGCG
AGAGAGTAGTGCCGTCTCTACAAGTACCGGCGGCAGCGGTAGCAAGGTCA
CTGGGTCAACACATATTTTCCCCAGAAAAACGAATGTTTTTTTTAATGTC
ACAACACCGAAAAATATGTGTCATTATTGCCATGTGCATATATAATACAG
ACGTCGCACAGGCTATATCACGGAGAGGTCGTCGGCGTTGACAGCGATGG
TTTCTATATTGCATTATGGAGATGCTCAGATAGACTGCGTCAGGCTGGAT
GCCTGGCTTTTCCTGTCACCGTGCGAGAACATACCGCTGTGGGAGAAGAT
GGTGCCGGTATTCGCGAGCACAACGCCGAGAGTGGGTAGCAAAGTTACTG
GATCAACGGGTATTATTCTCCCCGAAAATATGGCTTGATCGACACATGCC
ATGTTCCGAACTTTTAACGGGCTAGACCCGTATTGATCCCAAGTTTCAAC
CAGCCCAGCCACGTTCTGATTTGAACGAAGATTCCTTTTTGCACGGAATT
ATCGTTGAGGTCTCATCACCGTACGTAGGGCAAAATGAACGTAGTGCTTA
CTACTGGTATTTCCCTGGTCTGTGATGCGTGGAAATATTTTTCTTCAGAA
CCATCATGCCCTCTGAACAGCAAACGCAGAAGAGCGGTCAAAATGACTTC
CCTTTCAAGAGTGGAAATATCGAATATTTTAATCGGAACTCTGTGTCTCC
AGGCCTGCCGGGCGCAGTGAAGATAATAATGCGGTCTACACCCATCGACC
CCTACGGTATTGGACCCTGAAAATGAACAACAAGAAAGGAACCTGACAGC
CCGCGGCGAAACGGGGCGAAAAGGGGGGGGGTCCAGAGCAAACATGAGAA
ATACGAATACAACAGTTTTTCGTGGTCCTGACCCATTTATCTTCGCAGAG
GCGTTGTGTGTGCGTTCAAAATTGCGTGAAGGGCACCATTTCTAGGCGGG
GGTTGTGTAGAAATTGTACAGGGCCCTGTGCCATAAGGATTGATGTATAC
CGAACGGTATCCGTACGAGCAGAGTACGACGAGTATCCTGTAGGCCTGAT
TTTGTGCATGTACGAAGTCCCCCGATTGGTGAGTTCACCCCTTGACTACA
ACAGCCGCAACGCCGTGTGCTTGATGTTGAGGTAGTATAACTGACAGACT
GCAATACCCACAGTGATTCCATCGAGCGGTAGCAGCTAGCTGGACAGCGC
AAACAGCATGATACTGTAGACTTGCGCATGGCGATGAAAGAAACAGCTAG
TACTAGGTGGTGAACTACTTCATGTAGCACTATATCTGCGGCGACGCAAT
GAAGAAAAAGCGATAGAGCTGGCAGGCACCAGCTTATCTCGAGAGTTCCG
TGGCGAGCTATAGCCGCTGCTTTTGTAGCGTCCTGTTATGAATGCTAATA
TCCATAGGCACAGCGACAGGAGGCCTGCCACAGTCGTGGCAGGGGCAATA
TGACACTGTGACTTTCATCTGATCGTAATGCGGGTTTCTCTTGGAACGAA
GTTATTTCTTCCTGCCAACTCTTTTTTTTAATGTGTATGGAGGTCAAGAC
CCACGAAAAATGGAGCGATTCATTAGTATCCGATCCTCGTCCCTCGCGTT
CCTTGTGTTTTTGCGCGCTCCTTGCTGCCAAACTAGAATGGCATGCGATT
GCCGGCGCTGATGAAGGAGGTCGACCCGGAGTTTACCCTTCACGCTGACA
CAGAAGAGGCAAGAAGAGAAGGGCGGTGGGGGTGGGAAAGGGGGGTCGTA
TTGATGTTTTGCATACCGTAGTTGGTAGATCATTGGTCACATGTCCTCGG
AAAGACCAAGCTTTGCTCCTATCAAAGCGATATCCGATCGTCAATCACTT
TTTCCTACGTTGCCAAATGTAGCTCAAAAATGTTTCACATACTCTATCTA
TCCCAACCCTCGCATGTTGAGCCTTGTTTTCGCATTCCCATTATTCAAAT
ACCTCTCTACCTCTCGCATCCTTCGATTTTCCCTGATTCACTGGTACTCC
CTCCTTCCCGTAAGTGTGCGACGTTATGATTTCTCATTTCTTGTGTAGGC
TATTTCTCTACGTATGGCTTGTAAAATTTAAGAATTAATATTTCGTTGTC
GCATTTTGTTCCAAAATAGTTCCGAAACATTCGCGCAAAGGGGAACTAAG
AAAACGGCCCTTTTAGGCTCCATTTTGAGTGTCTGCTCTGCGCCCGGCGG
CGGACACAGCGTCCCCCATATCGTCACACAACATTTCAGCACCTCGCCAA
GAGCTGTACGACTCTCGTTCAACCTCTAGATCGTCTGCGGCGCGAGTTTC
GCAACCAGCATTACCACTCCGGCCAGTCTGGCATCTTTTGCCGAGAGCCC
ATCAGCCCAGGATAAAAATTGCGAGCTGAGCGAGACAAGTCGAAACGCTT
TGGCCGTACGGTACACTTTAGCGCTACCTCCTGGTAAAAAACGGCTTCTG
GAAGGCGTTGGGCCATAGTTGGCGGAGCAGTTTGGAGTTGGCGACCAACA
TCCCAGACAACTTGGGGCACGTGCACGAGGACAACTGGACCATGGCAACA
CCCTTTCGTTGAGGTCAGCGTCACGAAGCGGGCGGCCATCGGGTTTCACA
CCGATAAAGCACGCCACGATTCGAAGGGTCACCGCCGCGAATCGAACCCT
GACCGTCGATCAACTGTCTGCCAAGCTAACCGAAGCTGGTCTCGTAGCTG
GCAACTCAAAGAGATGGGCGCCACGAGGGTGAAACGGGGCATTACCCCAT
CTCTGTCGCTGACGTACGGGAAGAACCGGGTACACTTCATCCTGGACCAA
GCAGCAAGGAACGGCATCACTTTCACGAGCGACTTTCAAACAATTCTAGT
CGACGAAGCGTGGTTTTACCTAATTCGCGACAGGGATTTCATCCACATGT
TCCCCCGGAAGGAAAGGGTGGAGTCCATCAAAGTGCAGCAGAAGAGTCAC
ATTCCTAAGGTGATATTCATCTGCGCCGTTTCGCGTCCAGATCCTTCCCG
CGATATCGACGGCAAGATTGGAATTTGACGTGTTTGCATCATCAAGCAGG
CGCAGAGGAAGTCGGCCCGGCGTGAGTGGGGACAGCAATATGAGTTCGAC
GTGACGATTGATGCCGAGTGGTACCAGGGGTGGTACAAGGACTCTTTTCT
CCCAGCATTGAAGGAAAAGATGCCGTGGTTGGAGGGTGAGGAAGTGGTCG
CGCAGCAGAATGGAGCGACCCCGCACATGGGGGAAGACACGCCGCGGAAG
TTCAACGAACTCGGGAGGGACGGGGGGTAGAATATCAATCTCGTAACTCA
GCTTGCGCAATCACCAGATCTCAACACCAACGAATTCGGGTTCTTTGCAG
CTGAAAAGTATGGTTTGGAGGGAGCGTCAGGGTACGATAGATGGCCTTGT
GGAGGGGGTAAAGAGCATGTACGGTGCGAACGATGCGGCAACCTTGGAGA
GGGTGTGGCAGAGCGTCTTTAAGCGGTGCAATCAGACCTTGAAGGCGCTA
GGAGGTAACGATTTCGAGGTACAGCACACCGAAACCACGAAAAGGCAGCG
TGCGGGAAGTGTTCCAAATCGGTCAAAAACGATCCAGAGGCTTTCGACGC
GGCGGTAGAATGGTGGATTGATGGAAACGAAGAAAGTTGCGAAGATTAAA
ATTAACGTGAAAAACACCAAGGGATCCGATGCAAAAAACGTTTTTGATTT
ACACCCTTAACGTCGCAGACTTATGGGACGGAGGGAGTATATATATATAT
ATATATATATATATATATATAATCTCCCTCTTGTTTTTTTATAGGGTATT
CTCCCACTACACGAACTTGGGCCTCGCACTCACTACCGCCGTTACATTTG
AATGTTATCGTCGATTGTGCGAGAAGGAGGGGGCGAGGGGGTGAAAGATG
TGGGGGAAAAATTGCGTTTTACCTCCGAGATTCTCATTCATGGGTCAACC
CTGGCATATTTAGTTGGACTATAAGTTGAAGTTCATATTATAACCCAATT
GTACCCATGTTGAGATTATGGAGCTGCTTAATCCCCAGTTGTATACCCTT
ATTAGCAAAAGTAGATCAGTGAGGGGGAGACGTGTATTAATGATTACAAT
TTGTAGTTGTTGGACAGTTCACCACGCGTCTTAGAGAGGATGCGGGGAAA
ATATGAGCATTGGCGGAGAACACATGACCAGTATATGCTGCAGCCGCACC
TGTAGAGTAAGACGTCACTCACTCTGTTTAAAGTAGAGGTAGCGTTTTTT
GTCCGTCTATGCGATGGTATACACCCAACACAGAAGAACTCGTTCTTCGT
TTATTTTTTCTGCACCCACTCCCCCCTTCCCCCCCCGTTCTTAACAGAAC
GCAAAACAAGAACGCAAAAAAAGAACGCCAAAACTATTTCTGGATACGAC
ACGTATTTTTCAATATTTTTTGGCGAATATCTTCGTCACTGTGTGTATAT
ACATGCAGTCCTATTCATGTATTGACGTCCGCGTCCCCAAGACGAGTATT
ATATCCATTGGACCGTTATGAGGGCGTCATTATTATGTGTTCGTCTGGCG
GGTGAAATAAAAATTGATCAGCAGTTCCAGATCGCGTAAGGTTCAACTTT
CACACATGTCTCATAACATCGAAAGACAATGGATGATCTGTTTGTGTCAC
TTTTTTTACAGTCTGTCTTTGATGTGCATGTCGGACAGATCAAAGCCTGC
AACGTCAAGGTTTCGGCGTTGTGCACATGTTCCGTAGAAAAGCATTCTCT
GCGCTGTGGAGTTAGTTCCGTGCGTGCAAACGGAACACCGTGCGTCATAG
GTCGGGGCGCGAAGACAGAAATATTGCCGTTGTGCCGAGTAAATAGACAA
ACCAGAACGTAACGTTCTCTTCAGCGGTGCGGTAAACCGGTAGATGTTTC
TGTTTTGTTCTGTTTGTTCTGTTCTGTTCGACGACGTATCATCTATTGTG
CAGTTATTACTAGCGCTGGCTCAAGATCACATAGAAGGGGTTGCCTCCGC
AGCCGTGGAGCTCGCGCGGCATCGGAACTCTGATACGGTCGAGCTCCAAG
ACCTACAATTATGCCTGGGTGGGTTGGTTTACGAAAAGTAGTGGGGAAAA
AAACTCAACAGGGTTATCACATGACCTGGTCCTGAATTACAGTATTTTTT
TCATGGGGCCGTGTTCTGAGCCGGTTTGCGGATTGAAAAATTCGCTGAAC
TGCTGCTTGTATCTATCAGTTTTGTGTGATCGATAGACAGACGCAGCAAA
GATTGAAGTTTGACTGCATGATACGGTGGTGGCCTCTCTATAAATTGCGT
ACAACTGTTTCCCAAAATACAGATCTCATTTAGATATTTTTCCAGCCTGA
GTTGTGCTGCACGACGAATATTTTGAATCATTTCTTCTTGATGGGAAAGG
CTTGATTACGGCAAGTAGCCCCGCCACTGATGTTGACATGAAAAAAGTCA
GCTGAGCCTCCCCCCCCCCTCCCCCCCCCTCCTCATGTGTATTTTTTTTA
ATTGCAATAACAACAGAGAAAGATTGGGACATGCCGTGGCTCGGCATCGG
AAATCCTTCGCGATCTAACTCTCTTCGCGAGGCGAGGACTGGGCGGTTGA
AACTCGAAGCAACAATCCAGGCAGAACGGGTGAGCAGGCACCGCTGCCGC
CCGCCGCCGTATCCCTTGTCCTTGGCATTATCCCTCACTTTTTTTATCGG
CGAGTTTTGTGTTTTTAGTGGAGGGGGCTATATCGGAACATAGATGAATT
TCTGACAGAAAGCGATAGAAGAGAGCGCGCTGCTGCAGTCGTTGTACACG
AAGCCAATACCCACCTCCTCGTGTCCGTGCTGTAGAAAATGGCTGTAGTA
CAGTAAACTCGACTGTTTGTCAGGAGCGGCGATGTCTACCTTTTCCCGTG
ATGATGTATATGACCGGCGTAGTTCCCCCTGTTCGTGAGGTTGGTAAGCA
TTACCGTTAAAAACACGGAGACATTTTTTTTTTTTAACCCCCGGAAGGCT
GAGGCAAAAACCTTTACCGATGCTTCCATACTCGAGTAATTTACCAAAGT
ATGTCTACATTTCCTTCAACAGAACAGAACACGGAGGCATTGCACCGCCG
GGGAGCAAACGCTTCTTAAATGCGATCGATTATCTCGAGAACGGAGCCCT
TCCGCTGTCGACAGAACGACCCGTCGAACGACAGATCTCCGAAGACCTTC
CCAACGGCACACTGTTCATTTGTTGTTAGTAGTAGTAGTAGTCGTAGTAG
TAGCGTCGTAATCGTTGAGATAGTCGTATTTGGAAAGCGTTCACACGTCC
AACGGCTGGTGACCCGTACACTCCGTACCCTAGGACGAATCACCTATGGA
CAAACATGTATGCATCATAGATTGTGCATGGATCAGTTGGGGAAAAATGT
TTTCTGATGATGCATAGCGGACGCATCGCTCCTGGGCAAACATGTACGTG
GCATAGCGCGTGTACGGCTAACTAGGAATCACTCATCCAACGATTCGCAT
CGGATGGATCACGAGCTGTATCGTCGGATGGATGAAAGCGTTCGCACCCC
GGTGATGCAGTACCTCCGGCTTTTACGGTAGATATGGATTACTTGGGAAA
ACGGTTAGTTGCCTCAAGCTGTTGCTTGTTCCACCCTTGCTTTGACTTGC
TTTAAAATGGAGTGTTTTAGCCTTTCATCCAAAAGTGGAAATATATGTGT
TGTATTACGCAAATATGACCGTTTGCGGAGGAGATCAAATTTTGCTGATA
GGTGTAAACAACTAAAGTTTGAATTCAGCTTCATAATATGAACATGATTG
CAGTGGAGTGTTATTATATGACCTTCAGAGCTAAGTTCAACTGACTGTGG
CAGGGTCGACTTACGAATATAAAACGAACTAGAGTTTAGTCGGTCATATG
AAACTATTTCATGTTATAACTACAGTACACATGCAAGTGATGCAGTGATA
GTCCCTCATGAAGGTTGCCGTAGCCCATGCCTCCTCCCCCTCGAAAGTTT
GCCTCTGTTCCTCTCTCCCACCCACCCAACCGGATGCTTGTTCGCTGTGT
AATGTCACTTTTATTTGTTTGTGTGTCTGTCTCCTAACCTCCTTGAACCC
TTGAATCAATCAATCAACCGATCAATGAAATAGGCCGCCGTTACAGCCGC
CGCCACTCCATCCTGGCGAAAAAAGAGTAGCGCAAAGAGAAAGAGCGAGG
CGGCCTCGGCAGGAAGCAGTGGCAAGAAAAAAACACCTTTACCCACCCCG
TCCCAAGCTCAAGCGGCCGGGGCTGCGGGCGGCGCGGGATCTGGTTCGAA
CAGTAATAATCCTGTGCCACTGGATGGGTGATCGCGTGATTACCCAGGCG
TGCATTTGTTCTTGTGGGGCTATTGGCCTTGTTGTGGACGCCATAGTTGT
GAGACGATTAGTGGGGTAGTGTGGTACCCCCCCCCCCCCCCCCCCCCCCG
TCCCTGAAGTTTCTGTTACGGCTGGCGGAGAGGAAAACGTCTCCTATTTA
GGCTGTGCCGTCGTGGTGGTATCCGTTAGACAGGATATAACTACCGTGTC
TTGTATGTTCATGGGAGGATGATGACACGACCGTTTCAGCTGCATACCAC
TTGCGAAAGGTATAGCCCATAACTGGAGCGTTTGCGCAAAACGAGTTCCT
TTTGCCAATTTTAGTTTGGTTGTGTACATCTTACAGTTAGCTCGTCGCCC
CGGACGCCAGCTCACCGCACCAACGCCTCGGATAGGAATTCCTTTTACAA
ATTCGTCTATTTCGTGAGAGATAGGAATAGTCGCTGGCTGTGACGAGGAA
TTAATTTTGTAACGAGCCGTTGGTGTAGGTGAATGGGGTTGTATCGCAAT
GTAACAGTAGCAGGCGCTTGACAAGGTGTGGATATCTAGATGGATTGATG
AATTGGATATTTGTCGCATATGCAGATGACATTATCCAATTGTGTAGATT
TGATTGTCGTTTTACATTTGACAGGCTTCTGTACCCAATACAGACAGTCA
CGTATAAAATTCTCTAAGACACTAAAATAACTAGTTTATTGTTAGGGTGC
AGAGATTGAGATTCCCGTGCAGCTACAATTTTAAATCCACCTACGGGAAT
CACCCTGGTTTGCGCAGTTGACGGTTGGTACTGAACTTCGTGCGGTTGGC
GCTTGTTTCAGCGGGCCGACGCTTGTGTTTTGCGGTAGACGGCAGCGTGC
GATACGGCAGTCGGCTTTTTACAGTGTGTTGGCGTGGTCGACACGTGGTT
TGAATTTGAGGTTCGGCGTTAGGTTTTTGAAACGCTGTGGGCGACTTTTG
CGATTTTTTATTGTCTTTCGCGGAGCGGCCGTTTGGATTCAAGGCTTGAA
GTTGATCTATGTGGGTCACTGTTTACCTTTTGCGGTTGGCGGCTTGTGTT
TCGGAACGGCGTTGACGTGTTGTGGATTTTAGTGTCGGAGCGGTGCATGA
ATTGGACGACAGTATTTGCTTTTCAGACCGCCGTTTGAGCTACAGCTTGC
TGAGTGGCAGGCGGCTGTAAAATGGTGCCGGTGTTCAGTATTTTGCCTGG
TGTGTAAATGGCTGTTATTTCTGACAATGAACTGAACGTATATACTGGCG
GCAAGATGCGGGATTGACAATTTGATACTTTGCGTCATCGTTGAGGCTTG
AGACAAAGGTGTTTCTGGTGATGCTACTACTGTCATATTGAGTAGTTTTT
GTCAAGCTTGGCGTCAATATATTACTCTGAGGTACTATTGATGAGTTAGC
TTTAGGGGGTGCTGTACCGCAATTTGACGGTAGCAGGCGCTGGACAAGGT
ACAGATATCTAGATGGATTGATGGATTAGATATTTGCCACATATGCAGAT
GACATATTCCCAATTGTGGAGGTTTGTCATATTCCATTTGACAGGCTTCT
GTACCCTATACAGTCACGTAAAACAATGATATGAGCTTGGGCCTACTGTG
AGATGTGACTCCCTGAGCGATATAAGGCTGTAAGAAGGTGAGGACCAATA
CGCGACTAAATAGAAATTTGCAACAGGGATTCGTTTTATGTCAATAATCC
ACTAAATTGGTTATCTTCGAACTTTTATGAAGTTTTTCAATAGCTATCGA
ACGCAACCAACCCTCCTTTATTATGTACTGCCGGGTGAGGTAGACTAATG
AACCTCGAGAAAGTGTACTTCCTCAAGGGTGTGGTGAAGTAGACTGGTGA
ATCTCGAAAAAATGTACTTCCTAAAGTGGATTGAGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1334:10840..21125+ >mRNA_H-paniculata_contig1334.2090.1 ID=mRNA_H-paniculata_contig1334.2090.1|Name=mRNA_H-paniculata_contig1334.2090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at H-paniculata_contig1334:10840..21125+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGCGCACAAACCTCGGCACGAGCACGTTGTGCCGCAGGTAGAGCC
GGAGCCGAAGGATGCTAAGCTTGTGGGGCCAATGATGGGGGCGCACAAAC
CTCGGCACGAGCACGTTGTGCCGCAGGTAGAGCCGGAGCCGAAGGATGCT
AAGCTTGTGGGGCCAATGAATGGCATGCGATTGCCGGCGCTGATGAAGGA
GGTCGACCCGGAGTTTACCCTTCACGCTGACACAGAAGAGAATGGCATGC
GATTGCCGGCGCTGATGAAGGAGGTCGACCCGGAGTTTACCCTTCACGCT
GACACAGAAGAGTTATTACTAGCGCTGGCTCAAGATCACATAGAAGGGGT
TGCCTCCGCAGCCGTGGAGCTCGCGCGGCATCGGAACTCTGATACGGTCG
AGCTCCAAGACCTACAATTATGCCTGGTTATTACTAGCGCTGGCTCAAGA
TCACATAGAAGGGGTTGCCTCCGCAGCCGTGGAGCTCGCGCGGCATCGGA
ACTCTGATACGGTCGAGCTCCAAGACCTACAATTATGCCTGGAGAAAGAT
TGGGACATGCCGTGGCTCGGCATCGGAAATCCTTCGCGATCTAACTCTCT
TCGCGAGGCGAGGACTGGGCGGTTGAAACTCGAAGCAACAATCCAGGCAG
AACGGAGAAAGATTGGGACATGCCGTGGCTCGGCATCGGAAATCCTTCGC
GATCTAACTCTCTTCGCGAGGCGAGGACTGGGCGGTTGAAACTCGAAGCA
ACAATCCAGGCAGAACGGGCCGCCGTTACAGCCGCCGCCACTCCATCCTG
GCGAAAAAAGAGTAGCGCAAAGAGAAAGAGCGAGGCGGCCTCGGCAGGAA
GCAGTGGCAAGAAAAAAACACCTTTACCCACCCCGTCCCAAGCTCAAGCG
GCCGGGGCTGCGGGCGGCGCGGGATCTGGTTCGAACAGTAATAATCCTGT
GCCACTGGATGGGTGAGCCGCCGTTACAGCCGCCGCCACTCCATCCTGGC
GAAAAAAGAGTAGCGCAAAGAGAAAGAGCGAGGCGGCCTCGGCAGGAAGC
AGTGGCAAGAAAAAAACACCTTTACCCACCCCGTCCCAAGCTCAAGCGGC
CGGGGCTGCGGGCGGCGCGGGATCTGGTTCGAACAGTAATAATCCTGTGC
CACTGGATGGGTGA back to top
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