prot_H-paniculata_contig1334.2090.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1334.2090.1
Unique Nameprot_H-paniculata_contig1334.2090.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length194
Homology
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A6H5K9V4_9PHAE (TFIID_20kDa domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9V4_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 4.240e-56
Identity = 99/129 (76.74%), Postives = 108/129 (83.72%), Query Frame = 0
Query:    1 MGAHKPRHEHVVPQVEPEPKDAKLVGPMNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGNPSRSNSLREARTGRLKLEATIQAERA 129
            M A KP H  VVP VEPEPK+AKLVGPMNGMRLPALMKEVDP ++LH DTEELLLALAQDHIEGVA+AAVELA+HRNSDTVELQDLQLCLEKDWDMPWLGIG    + + RE + GR +L   I AERA
Sbjct:  387 MAAMKPLHPVVVPPVEPEPKEAKLVGPMNGMRLPALMKEVDPAYSLHPDTEELLLALAQDHIEGVAAAAVELAQHRNSDTVELQDLQLCLEKDWDMPWLGIGARKMAGAERETKVGRARLNTAIAAERA 515          
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: F6WT81_CIOIN (Transcription initiation factor TFIID subunit 12 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6WT81_CIOIN)

HSP 1 Score: 79.0 bits (193), Expect = 6.570e-15
Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 0
Query:   17 PEPKDAKLVGPMNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 120
            P+ KD K+   +N  RL  L++E+DP   L  D EE+L+ +  D IE V SA+ ELA+HRNS+T+E++DL+L L+K W++   G G+    P +  +  +A   RL L
Sbjct:   76 PQEKDNKI---LNRQRLQELIREIDPAEQLDEDVEEMLMQITDDFIENVVSASCELAKHRNSNTLEVKDLKLHLDKQWNISIPGYGSEEIKPFKKPTTADAHKQRLAL 180          
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: R4FLY8_RHOPR (Transcription initiation factor TFIID subunit 12 n=6 Tax=Triatominae TaxID=70999 RepID=R4FLY8_RHOPR)

HSP 1 Score: 75.5 bits (184), Expect = 9.700e-14
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   31 MRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 120
            MRL  L++EVDP   L  D E++LL +A D +E   SAA  LA+HR S TVE++DLQL LE++W+M   G G     P + +S+ EA   R+ L
Sbjct:   70 MRLQDLVREVDPNEQLDEDVEDVLLHMADDFVESAISAACLLAKHRKSSTVEVKDLQLHLERNWNMWIPGFGTDELRPYKRSSVTEAHKQRMTL 163          
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A2C9JVR7_BIOGL (Transcription initiation factor TFIID subunit 12 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JVR7_BIOGL)

HSP 1 Score: 75.9 bits (185), Expect = 1.570e-13
Identity = 41/99 (41.41%), Postives = 62/99 (62.63%), Query Frame = 0
Query:   26 GPMNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 120
            G ++  RL  L+KEVDP   +  D E++LL +A D IE + SA+ +LARHR S+T+E +D+QLCL++ W+M   G G+    P + +   EA   R+ L
Sbjct:  107 GVLDKARLRDLVKEVDPLEQMDDDVEDVLLQVADDFIENIVSASCQLARHRRSNTLEAKDVQLCLDRGWNMQVPGFGSEELRPYKKSITTEAHKQRMAL 205          
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A8J6FS37_ELECQ (Transcription initiation factor TFIID subunit 12 n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6FS37_ELECQ)

HSP 1 Score: 73.9 bits (180), Expect = 1.730e-13
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 0
Query:   32 RLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 120
            +L  L++EVDP   L  D EE+LL +A D IE V SAA +LARHR S+T+E++D+QL LE+ W+M   G G+    P +     EA   R+ L
Sbjct:   38 KLHDLVREVDPNEQLDEDVEEMLLQIADDFIESVVSAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMAL 130          
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A1E1WSY0_PECGO (Transcription initiation factor TFIID subunit 12 n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1WSY0_PECGO)

HSP 1 Score: 74.7 bits (182), Expect = 2.150e-13
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 0
Query:   28 MNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 120
            M+  RL  L++EVDP   L  + EE+LL LA D I+   +AA  LA+HR++ TVEL+D+QL LE+ W+M   G GN    P +  ++ EA   R+ L
Sbjct:   73 MSRPRLQELVREVDPTVQLDEEVEEMLLHLADDFIDSTLNAACSLAKHRHASTVELKDVQLTLERQWNMWIPGFGNDDIRPYKRAAVTEAHKQRMAL 169          
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A6G1SBA2_9ACAR (Transcription initiation factor TFIID subunit 12 n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SBA2_9ACAR)

HSP 1 Score: 73.2 bits (178), Expect = 2.370e-13
Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 0
Query:   27 PMNGMRLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGNPSRSNSLR---EARTGRLKL 120
            P+   RL  L+ EVDP+  L  D EE+LL + +D I+ V S+A E+A+HRNS+T+E+ D++LCLE+ + +   G G  SR    R   EA   R+ L
Sbjct:    9 PIEPKRLQDLVNEVDPDEQLDEDVEEVLLNIGEDFIDAVVSSACEIAKHRNSNTLEVGDVRLCLERKYKIWIPGFGGESRPTPKRFTSEAHKQRMAL 105          
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: V3Z331_LOTGI (Transcription initiation factor TFIID subunit 12 (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3Z331_LOTGI)

HSP 1 Score: 72.8 bits (177), Expect = 2.940e-13
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 0
Query:   32 RLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWL-GIGN----PSRSNSLREARTGRLKL 120
            RL  L+KEVDP   L  D EE+LL +A D IE V S+A ++A+HR S+T+E++D+QL LE+ W+M WL G G+    P +   + EA   R+ L
Sbjct:   18 RLQELVKEVDPLEQLDDDVEEVLLQVADDFIENVVSSACQIAKHRKSNTLEVKDVQLYLERTWNM-WLPGFGSEDVRPFKKACVTEAHKQRMAL 110          
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A7J7X801_RHIFE (Transcription initiation factor TFIID subunit 12 n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=A0A7J7X801_RHIFE)

HSP 1 Score: 72.8 bits (177), Expect = 2.940e-13
Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 0
Query:   32 RLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 120
            +L  L++EVDP   L  D EE+LL +A D IE V +AA +LARHR S T+E++D+QL LE+ W+M   G G+    P +     EA   R+ L
Sbjct:   18 KLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMAL 110          
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Match: A0A4W3J6I2_CALMI (Transcription initiation factor TFIID subunit 12 n=2 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J6I2_CALMI)

HSP 1 Score: 73.9 bits (180), Expect = 3.000e-13
Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 0
Query:   32 RLPALMKEVDPEFTLHADTEELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLGIGN----PSRSNSLREARTGRLKL 120
            +L  L++E+DP   L  D EE+LL +A D IE V SAA +LARHR S+T+E++D+QL LE+ W+M   G G+    P +     EA   R+ L
Sbjct:   62 KLQDLVREIDPNEQLDEDVEEMLLQIADDFIESVVSAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSDEIRPYKKACTTEAHKQRMAL 154          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1334.2090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9V4_9PHAE4.240e-5676.74TFIID_20kDa domain-containing protein n=1 Tax=Ecto... [more]
F6WT81_CIOIN6.570e-1540.74Transcription initiation factor TFIID subunit 12 n... [more]
R4FLY8_RHOPR9.700e-1445.74Transcription initiation factor TFIID subunit 12 n... [more]
A0A2C9JVR7_BIOGL1.570e-1341.41Transcription initiation factor TFIID subunit 12 n... [more]
A0A8J6FS37_ELECQ1.730e-1345.16Transcription initiation factor TFIID subunit 12 n... [more]
A0A1E1WSY0_PECGO2.150e-1343.30Transcription initiation factor TFIID subunit 12 n... [more]
A0A6G1SBA2_9ACAR2.370e-1342.27Transcription initiation factor TFIID subunit 12 n... [more]
V3Z331_LOTGI2.940e-1345.74Transcription initiation factor TFIID subunit 12 (... [more]
A0A7J7X801_RHIFE2.940e-1344.09Transcription initiation factor TFIID subunit 12 n... [more]
A0A4W3J6I2_CALMI3.000e-1344.09Transcription initiation factor TFIID subunit 12 n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 28..96
e-value: 2.6E-18
score: 67.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 33..96
IPR003228Transcription initiation factor TFIID subunit 12 domainPFAMPF03847TFIID_20kDacoord: 32..96
e-value: 1.3E-17
score: 64.0
IPR037794Transcription initiation factor TFIID subunit 12PANTHERPTHR12264FAMILY NOT NAMEDcoord: 35..166
NoneNo IPR availablePANTHERPTHR12264:SF21TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12coord: 35..166
NoneNo IPR availablePRODOMPD012998coord: 28..103
e-value: 4.0E-13
score: 179.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1334contigH-paniculata_contig1334:11082..19220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1334.2090.1mRNA_H-paniculata_contig1334.2090.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1334 10840..21125 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1334.2090.1 ID=prot_H-paniculata_contig1334.2090.1|Name=mRNA_H-paniculata_contig1334.2090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp
MGAHKPRHEHVVPQVEPEPKDAKLVGPMNGMRLPALMKEVDPEFTLHADT
EELLLALAQDHIEGVASAAVELARHRNSDTVELQDLQLCLEKDWDMPWLG
IGNPSRSNSLREARTGRLKLEATIQAERAAVTAAATPSWRKKSSAKRKSE
AASAGSSGKKKTPLPTPSQAQAAGAAGGAGSGSNSNNPVPLDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003228TFIID_TAF12_dom
IPR037794TAF12