Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 2528 |
| Cds size | 1758 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13322.2078.1 >prot_H-paniculata_contig13322.2078.1 ID=prot_H-paniculata_contig13322.2078.1|Name=mRNA_H-paniculata_contig13322.2078.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=586bp
MPGPQCARMGCLKQRSCGVAGREKSEFCAEHAQPEMVIVFNKKCRKEGCC
KTSLYGVAGSRKREFCAEHAMAGMSNTRSKKCLRGGCSKQPSYGVAGSRK
REFCSEHAMAEMINVKSKICLNESCSKQPSYGVAGSGAVEFCAQHARAGM
INIRRKECLHVGCSKQSSWGMPGSKKRQFCAEHAMSGMINIGDKKCLHGG
CSKQPSYGVAGSGKREFCAEHAKAEIINTRNKKCNHGGCSNVSSCGMVES
GEREFCAEHARAGMVDVRNKKCLHVGCSKHPSYGVEGSGKREFCAQHARP
EMVNVANKKCRLEGCYKIPSYGIAGSGKREFCAQHARAGMINVTSKRCLN
EGCSTISLYGVAGSRKCEFCAQHASAGLIYVKAKKCGINGCSRSGEHAVT
GVDKETLCRHHASEATGACSAAESFSKGNTSHDRLAGNGVGNAVSVGGSK
RGNIASGTRYGIGASGRSGSDRRGDGEWRGTTTPPLISRLPADSSDVVSG
EEIGVKLELDMDYPGGSIDVGIRKRTAPAAPIGLNVSDVKSSSSTSWSVR
RARRTWSVESGNPTGSSHLVSVETAASVKLEWPPL* back to topmRNA from alignment at H-paniculata_contig13322:2329..5312- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig13322.2078.1 ID=mRNA_H-paniculata_contig13322.2078.1|Name=mRNA_H-paniculata_contig13322.2078.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2984bp|location=Sequence derived from alignment at H-paniculata_contig13322:2329..5312- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGCGACTATTGACAAACGCCCTACTCCCCTCGACCGGTTATCGGGCGAC
GAAAAGGAGTATGCCTGGTCCACAATGCGCCCGCATGGGTTGCCTCAAGC
AGCGCTCGTGCGGCGTGGCGGGGAGGGAGAAGAGCGAGTTCTGCGCCGAG
CATGCACAGCCAGAAATGGTCATCGTGTTTAACAAGAAATGCCGCAAGGA
GGGCTGCTGTAAGACATCCCTGTATGGTGTGGCGGGGAGCAGAAAGAGGG
AGTTCTGTGCCGAGCATGCCATGGCAGGAATGAGCAACACCAGGAGCAAG
AAGTGTCTACGCGGGGGTTGCTCCAAACAGCCGTCGTATGGTGTGGCGGG
GAGCAGGAAGAGGGAGTTCTGTTCCGAGCATGCCATGGCAGAAATGATCA
ACGTGAAGAGCAAGATATGTCTCAACGAGAGTTGCTCCAAACAGCCATCG
TACGGTGTGGCGGGGAGCGGGGCGGTGGAGTTCTGTGCCCAACATGCCAG
AGCAGGAATGATCAACATTCGGCGTAAGGAGTGCCTCCACGTCGGTTGCT
CCAAGCAATCGTCGTGGGGTATGCCGGGGAGTAAAAAGAGGCAATTTTGC
GCCGAGCACGCGATGTCAGGAATGATAAACATCGGGGACAAGAAGTGTCT
ACACGGGGGCTGCTCCAAACAGCCGTCGTACGGTGTAGCTGGGAGCGGGA
AGAGGGAGTTCTGTGCCGAGCACGCCAAGGCAGAAATGATCAGCATCAGG
AGCGAGAAGTGTCTACACGGGAACTGCTCTACGATTCCGTCCTACGGTCT
GGCGGGGAGCAGGAAGAGGGAGTTCTGTTCCGAGCATGCCATGGCAGGAA
TGATCAACGTGAAGAGCAAGAAATGTCTCGACGAGGGTTGCTCCAAGCAG
CCGTCGTACGGTGTGGAGGGGAGCGGGGCGGTGGAGTTCTGTGCCCAACA
TGCCAGGGCAGGAATGATCAACATTCGGCGTAAGGAGTGCCTCCACGTCG
GTTGCTCCAAGCAATCGTCGTGGGGTATGCCGGGGAGTAAAAAGAGGCAG
TTTTGCGCTGAGCACGCTATGTCAGGAATGATAAACATCGGGGACAAGAA
GTGTCTACACGGGGGCTGCTCCAAACAGCCGTCGTACGGTGTAGCTGGGA
GCGGGAAGAGGGAGTTCTGTGCCGAGCACGCCAAGGCAGAAATTATCAAC
ACCAGGAACAAGAAGTGTAATCACGGGGGCTGCTCCAACGTTTCGTCGTG
CGGTATGGTCGAAAGCGGAGAAAGGGAATTCTGTGCCGAGCATGCCAGGG
CAGGAATGGTCGACGTGCGGAACAAGAAGTGTCTCCACGTCGGTTGCTCC
AAACACCCGTCGTACGGTGTGGAGGGGAGTGGGAAGAGAGAGTTCTGCGC
CCAGCATGCGAGGCCAGAAATGGTCAACGTGGCCAACAAGAAATGCCGCC
TGGAGGGCTGCTATAAGATACCGTCCTATGGTATAGCAGGGAGCGGGAAG
AGGGAGTTCTGTGCCCAGCATGCCAGGGCAGGAATGATCAACGTCACGAG
CAAGAGGTGCCTCAACGAGGGATGCTCCACAATTTCGTTGTATGGTGTGG
CGGGAAGCAGAAAATGCGAATTCTGTGCCCAGCATGCCAGTGCTGGGTTG
ATTTATGTCAAGGCCAAAAAATGTGGCATCAATGGATGTTCCAGAAGTGG
TGAACATGCAGTGACGGGTGTTGACAAGGAAACGTTGTGTCGCCACCATG
CCTCAGAGGCGACTGGCGCCTGCAGTGCAGCAGAGAGTTTTTCAAAGGGC
AACACCTCACACGATCGTCTGGCCGGGAATGGAGTGGGTAACGCTGTCAG
TGTAGGCGGAAGCAAACGTGGAAATATTGCCTCTGGCACTCGTTATGGCA
TCGGCGCCAGCGGACGGTCAGGCAGTGACCGTCGTGGCGATGGTGAGTGG
CGTGGAACAACGACGCCACCGCTAATATCTAGGCTGCCAGCCGATAGTTC
TGACGTGGTTTCTGGAGAGGAGATCGGCGTGAAGCTAGAGTTGGATATGG
ATTACCCTGGTGGTTCTATTGATGTTGGTATAAGAAAACGTACCGCACCC
GCTGCTCCAATCGGGTTGAACGTTTCTGACGTCAAGTCTAGTAGCAGCAC
TAGCTGGAGTGTAAGGCGGGCTCGTAGGACATGGTCAGTGGAATCAGGAA
ACCCTACTGGCAGCAGTCACTTGGTATCCGTGGAGACAGCAGCAAGCGTA
AAATTGGAGTGGCCTCCTCTTTAGAATATACCAGAGTCCTCGGATGTTGG
TGGCGTCAGCGTTGTTCGGCAAGTTAGTGGTTGCAACGATGATTGGATCA
TCACAGTCTTGCTGATTCTGTAGGCAGGTGGGTTGTTTTCGTCGAGTCGT
CCAACAAGTGCTGAGCACGTACGTTGAATTCGTGGTTAAGAATAGTACTT
TGTTTGGCCGATCGCACACATGGCAGCACGCACAAGCAGGTCTCTATTAT
TGCCTTTTGTTTGTATTGTTTTATCCGTATGAAGGTATTTTGCGCATTTA
TTTCAATATTTGAAGCCTGGCAATGCAGCAGATACGAGACGATCTTGTAA
GGAAATGGTCGTCGTACGCAGAACAAAACGCAAGCTGGAGATGATCGAGT
TTAGCAGATGGCGCAGGAGTTCATGTCCAGACACGCTCCCAACGTTCCTG
GGCAACAAGTGCACCAACGTTCGTGGAAGGAAAAGGAATTAGGTGTACAT
GCGTGCGAGAAGCGATAAAACGCGAGGAACAGACACATTACCCATGTCTG
TGCGCGAAAGGAAAATAGAAAGTGCTTGTACGAGCCTTGAGTGTCTAAGT
AAGCAAGATAAAATAGCATGTGCGGGTACTGCTGCCCGAAGAACAGCCGG
TGCTCGAAATTGAGAATCGATTTTTCCGTTGAAGATAAGTGAGCTTGGAA
GTGTGGCCGGCACTTGAAGGAATGTTTTTCCGCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig13322:2329..5312- >mRNA_H-paniculata_contig13322.2078.1 ID=mRNA_H-paniculata_contig13322.2078.1|Name=mRNA_H-paniculata_contig13322.2078.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3516bp|location=Sequence derived from alignment at H-paniculata_contig13322:2329..5312- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTGGTCCACAATGCGCCCGCATGGGTTGCCTCAAGCAGCGCTCGTG
CGGCGTGGCGGGGAGGGAGAAGAGCGAGTTCTGCGCCGAGCATGCACAGC
CAGAAATGGTCATCGTGTTTAACAAGAAATGCCGCAAGGAGGGCTGCTGT
AAGACATCCCTGTATGGTGTGGCGGGGAGCAGAAAGAGGGAGTTCTGTGC
CGAGCATGCCATGGCAGGAATGAGCAACACCAGGAGCAAGAAGTGTCTAC
GCGGGGGTTGCTCCAAACAGCCGTCGTATGGTGTGGCGGGGAGCAGGAAG
AGGGAGTTCTGTTCCGAGCATGCCATGGCAGAAATGATCAACGTGAAGAG
CAAGATATGTCTCAACGAGAGTTGCTCCAAACAGCCATCGTACGGTGTGG
CGGGGAGCGGGGCGGTGGAGTTCTGTGCCCAACATGCCAGAGCAGGAATG
ATCAACATTCGGCGTAAGGAGTGCCTCCACGTCGGTTGCTCCAAGCAATC
GTCGTGGGGTATGCCGGGGAGTAAAAAGAGGCAATTTTGCGCCGAGCACG
CGATGTCAGGAATGATAAACATCGGGGACAAGAAGTGTCTACACGGGGGC
TGCTCCAAACAGCCGTCGTACGGTGTAGCTGGGAGCGGGAAGAGGGAGTT
CTGTGCCGAGCACGCCAAGATGCCTGGTCCACAATGCGCCCGCATGGGTT
GCCTCAAGCAGCGCTCGTGCGGCGTGGCGGGGAGGGAGAAGAGCGAGTTC
TGCGCCGAGCATGCACAGCCAGAAATGGTCATCGTGTTTAACAAGAAATG
CCGCAAGGAGGGCTGCTGTAAGACATCCCTGTATGGTGTGGCGGGGAGCA
GAAAGAGGGAGTTCTGTGCCGAGCATGCCATGGCAGGAATGAGCAACACC
AGGAGCAAGAAGTGTCTACGCGGGGGTTGCTCCAAACAGCCGTCGTATGG
TGTGGCGGGGAGCAGGAAGAGGGAGTTCTGTTCCGAGCATGCCATGGCAG
AAATGATCAACGTGAAGAGCAAGATATGTCTCAACGAGAGTTGCTCCAAA
CAGCCATCGTACGGTGTGGCGGGGAGCGGGGCGGTGGAGTTCTGTGCCCA
ACATGCCAGAGCAGGAATGATCAACATTCGGCGTAAGGAGTGCCTCCACG
TCGGTTGCTCCAAGCAATCGTCGTGGGGTATGCCGGGGAGTAAAAAGAGG
CAATTTTGCGCCGAGCACGCGATGTCAGGAATGATAAACATCGGGGACAA
GAAGTGTCTACACGGGGGCTGCTCCAAACAGCCGTCGTACGGTGTAGCTG
GGAGCGGGAAGAGGGAGTTCTGTGCCGAGCACGCCAAGGCAGAAATTATC
AACACCAGGAACAAGAAGTGTAATCACGGGGGCTGCTCCAACGTTTCGTC
GTGCGGTATGGTCGAAAGCGGAGAAAGGGAATTCTGTGCCGAGCATGCCA
GGGCAGGAATGGTCGACGTGCGGAACAAGAAGTGTCTCCACGTCGGTTGC
TCCAAACACCCGTCGTACGGTGTGGAGGGGAGTGGGAAGAGAGAGTTCTG
CGCCCAGCATGCGAGGCCAGAAATGGTCAACGTGGCCAACAAGAAATGCC
GCCTGGAGGGCTGCTATAAGATACCGTCCTATGGTATAGCAGGGAGCGGG
AAGAGGGAGTTCTGTGCCCAGCATGCCAGGGCAGGAATGATCAACGTCAC
GAGCAAGAGGTGCCTCAACGAGGGATGCTCCACAATTTCGTTGTATGGTG
TGGCGGGAAGCAGAAAATGCGAATTCTGTGCCCAGCATGCCAGTGCTGGG
TTGATTTATGTCAAGGCCAAAAAATGTGGCATCAATGGATGTTCCAGAAG
TGGTGAACATGCAGTGACGGGTGTTGACAAGGAAACGTTGTGTCGCCACC
ATGCCTCAGAGGCGACTGGCGCCTGCAGTGCAGCAGAGAGTTTTTCAAAG
GGCAACACCTCACACGATCGTCTGGCCGGGAATGGAGTGGGTAACGCTGT
CAGTGTAGGCGGAAGCAAACGTGGAAATATTGCCTCTGGCACTCGTTATG
GCATCGGCGCCAGCGGACGGTCAGGCAGTGACCGTCGTGGCGATGGTGAG
TGGCGTGGAACAACGACGCCACCGCTAATATCTAGGCTGCCAGCCGATAG
TTCTGACGTGGTTTCTGGAGAGGAGATCGGCGTGAAGCTAGAGTTGGATA
TGGATTACCCTGGTGGTTCTATTGATGTTGGTATAAGAAAACGTACCGCA
CCCGCTGCTCCAATCGGGTTGAACGTTTCTGACGTCAAGTCTAGTAGCAG
CACTAGCTGGAGTGTAAGGCGGGCTCGTAGGACATGGTCAGTGGAATCAG
GAAACCCTACTGGCAGCAGTCACTTGGTATCCGTGGAGACAGCAGCAAGC
GTAAAATTGGAGTGGCCTCCTCTTTAGGCAGAAATTATCAACACCAGGAA
CAAGAAGTGTAATCACGGGGGCTGCTCCAACGTTTCGTCGTGCGGTATGG
TCGAAAGCGGAGAAAGGGAATTCTGTGCCGAGCATGCCAGGGCAGGAATG
GTCGACGTGCGGAACAAGAAGTGTCTCCACGTCGGTTGCTCCAAACACCC
GTCGTACGGTGTGGAGGGGAGTGGGAAGAGAGAGTTCTGCGCCCAGCATG
CGAGGCCAGAAATGGTCAACGTGGCCAACAAGAAATGCCGCCTGGAGGGC
TGCTATAAGATACCGTCCTATGGTATAGCAGGGAGCGGGAAGAGGGAGTT
CTGTGCCCAGCATGCCAGGGCAGGAATGATCAACGTCACGAGCAAGAGGT
GCCTCAACGAGGGATGCTCCACAATTTCGTTGTATGGTGTGGCGGGAAGC
AGAAAATGCGAATTCTGTGCCCAGCATGCCAGTGCTGGGTTGATTTATGT
CAAGGCCAAAAAATGTGGCATCAATGGATGTTCCAGAAGTGGTGAACATG
CAGTGACGGGTGTTGACAAGGAAACGTTGTGTCGCCACCATGCCTCAGAG
GCGACTGGCGCCTGCAGTGCAGCAGAGAGTTTTTCAAAGGGCAACACCTC
ACACGATCGTCTGGCCGGGAATGGAGTGGGTAACGCTGTCAGTGTAGGCG
GAAGCAAACGTGGAAATATTGCCTCTGGCACTCGTTATGGCATCGGCGCC
AGCGGACGGTCAGGCAGTGACCGTCGTGGCGATGGTGAGTGGCGTGGAAC
AACGACGCCACCGCTAATATCTAGGCTGCCAGCCGATAGTTCTGACGTGG
TTTCTGGAGAGGAGATCGGCGTGAAGCTAGAGTTGGATATGGATTACCCT
GGTGGTTCTATTGATGTTGGTATAAGAAAACGTACCGCACCCGCTGCTCC
AATCGGGTTGAACGTTTCTGACGTCAAGTCTAGTAGCAGCACTAGCTGGA
GTGTAAGGCGGGCTCGTAGGACATGGTCAGTGGAATCAGGAAACCCTACT
GGCAGCAGTCACTTGGTATCCGTGGAGACAGCAGCAAGCGTAAAATTGGA
GTGGCCTCCTCTTTAG back to top
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