mRNA_H-paniculata_contig13300.2071.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 181 bits (459), Expect = 8.880e-52 Identity = 92/198 (46.46%), Postives = 123/198 (62.12%), Query Frame = 1 Query: 16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRPDPSGDFDGKIGIWRVCVIKRVQRNSAR-------------RE---------------HLDVTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTV 525 + +DE+ FYL+R ++++R+F G++ G ++ H+S++P++M I A +RPDP+ DFDGKIGIWR+CVI+ QR+S + RE D TI AEWY++WY D +PA+KE M WL + VV QQDGA+PHTGK LN G GW V LV QPAQSPDLN NDLG FA L+ V Sbjct: 155 VHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRV 352
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A0W8C4B7_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C4B7_PHYNI) HSP 1 Score: 119 bits (298), Expect = 2.940e-28 Identity = 80/263 (30.42%), Postives = 126/263 (47.91%), Query Frame = 1 Query: 10 EKIRIDEACFYLIRGRDRMRMFPGKERVGSIK-----IQHKSNIPRVMFICAVSRPDPSGDFDGKIGIWRVCVIKRVQRNSARR-----EHLDVTIHAEWYREWYKDSFVPALKENMSWLEGED--------VVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKID 744 + + +DE FY+ + ++ + G++ +Q K +I +VMF+CAV+RP G++DGK+G+W V QR S R E +++ E YR + +PA+K W+ E + QQD A PH D E+ G GGW++ QPAQSPDLN D GFF ++S T L+ V+R + + TL + + S+ +++ GGN F + H + + LRA LP + D Sbjct: 53 DTVHVDEKWFYVKKIGQKVYLLTGQDGTPCEDAPVQFVQSKRHILKVMFLCAVARP--RGNWDGKVGMWPVVEKYVTQRRSVNRDAGVEELRPISMTREVYRRMLLEDVIPAIKAKWEWVRDEGLGVPLVSPIWVQQDNAKPHVLPD-DPEVLVAGCAGGWSILFRNQPAQSPDLNVLDCGFFNAIQSLQSVTVPRTAEDLISEVERAFASTTTTTLNKTFLSVQLIMQSIMRHNGGNAFGLSHIQKDKLLRAGELPDSLSCD 312
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A6A4EVK9_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVK9_9STRA) HSP 1 Score: 117 bits (294), Expect = 4.880e-27 Identity = 81/265 (30.57%), Postives = 126/265 (47.55%), Query Frame = 1 Query: 4 VSEKIRIDEACFYLIRGRDRMRMFPGK-----ERVGSIKIQHKSNIPRVMFICAVSRPDPSGDFDGKIGIWRVCVIKRVQRNSARR-----EHLDVTIHAEWYREWYKDSFVPALKENMSWLEGED--------VVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKID 744 + + + +DE F+L + ++ + G E ++ K +I +VMF+CAV+RP GD+DGK+GIW V QR S R E VT+ E YR + + A+K W++ + + QQD A PH E+ LG GW + + QPAQSPDLN D GFF ++S + +T L++ V+ + TL + + S+ +++K GGN F + H + LRA LP + D Sbjct: 158 MDDTVHVDEKWFFLKKVGQKVYILTGLDGEPCEEAPVQYLRSKRHIVKVMFLCAVARP--RGDWDGKVGIWPVVEEYVTQRKSVNRDAGVIELRPVTMTREIYRRMLIEDVILAIKSKWEWIKDAEHGVPLKVPIRLQQDNAKPHV-LPHDPEVMALGCSDGWKILVTAQPAQSPDLNALDCGFFHAIQSLQSFTTPRSTVDLIKEVEEAFQNTTYTTLNKTFLSIQLIMANIMKHDGGNSFPLSHFHKDKLLRAGKLPVAIPCD 419
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: UPI000B8AB67D (uncharacterized protein LOC110800636 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AB67D) HSP 1 Score: 117 bits (292), Expect = 2.240e-26 Identity = 78/252 (30.95%), Postives = 122/252 (48.41%), Query Frame = 1 Query: 16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRP--DPSGD--FDGKIGIWRVCVIKRVQRNSARREHLDVTIHA------EWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKI 741 I IDE FY+ R R + G+E Q+ + + +VMF+C ++RP +G+ FDGK+GI+ +R+S RE + I A E R D +PA++ W +D++ QQD + PH + + L+ ++ G+N+ L+ QP QSPDLN DLGFF ++S + LV+ VK Y AYD + W L +L GGN+++ H + LP V++ Sbjct: 272 IHIDEKWFYMSRKTQRYYLLAGEEEPYRAT-QNSNYLVKVMFLCGIARPIIGYNGEVLFDGKLGIFPFTEEVPAKRSSKNRERGTIEIKAITSVTKEVIRRKIIDELLPAIRSKWPWFASKDILIQQDNSRPHINPNDAEFLDAATQE-GFNIQLICQPPQSPDLNVLDLGFFRAIQSLQHQKFPRDVEALVKAVKEAYEAYDPKLINYTWLQLQYVMLEILGVKGGNNYKSPHKGKAKMDNLGLLPDTVEV 521
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.570e-26 Identity = 75/254 (29.53%), Postives = 123/254 (48.43%), Query Frame = 1 Query: 10 EKIRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRPDPSGD----FDGKIGIWRVCVIKRVQRNSARREHLD-----VTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKID 744 + + IDE FY+ + R ++ E V + K + K +I +VMF+ AV+RP +DG+IG+W + R+S R+ D T+ + YR + D +PA++ + + QQD A PH + + GR GGW ++L QPAQSPDLN DLG+F ++S T LV V + + + L++ + +L K + K G NDF++ H + ++ LP ++ D Sbjct: 43 DTVHIDEKWFYVTKQNRRYYLW-SDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLDKTFMTLQKVMECIFKMGGDNDFKLPHQKKHGLVKEGPLPTRLECD 294
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV) HSP 1 Score: 114 bits (286), Expect = 1.150e-25 Identity = 85/254 (33.46%), Postives = 126/254 (49.61%), Query Frame = 1 Query: 16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRP--DPSGD--FDGKIGIWRVCVIKRVQRNSARR------EHLDVTIHAEWYREWYKDSFVPALKENMSWLEG--EDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKI 741 I IDE F++ + R + +E Q K+ I +VMF+ A++RP P+GD +DGKIGI+ R QR SA R + +I E RE + +PA++ W E +++ QQD A PH + E E R+GG+ +N++ QPAQSPDLN DLGFF ++S T L++ V+ Y Y+ + W L +LK GGN+++ H K+ R LP V+I Sbjct: 235 IHIDEKWFFMSKITQRFYLL-SEEEDPYRACQSKAFITKVMFLAAIARPWLGPTGDILWDGKIGIFPFIDEVRAQRWSANRPAGTIEKKAKQSITKETIREMIINKLLPAIR--AKWPENGCKEIWIQQDNARPHI-QPNDAEFLEACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEI 484
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.420e-25 Identity = 71/241 (29.46%), Postives = 116/241 (48.13%), Query Frame = 1 Query: 16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRPDPSGD----FDGKIGIWRVCVIKRVQRNSARREH-----LDVTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLR 711 + IDE FY+ + R ++ E K Q K +I +VMF+CAV+RP +DGK+G+W + +R S R+ + +T+ YR + D +PA++ G + QQD A PH D E+ GR GWN+ L+ QPAQSPD N DLGFF ++S T L++ V+ + L++ + +L K +++ G N +++ H + + + Sbjct: 170 VHIDEKWFYITQVNRRFYLWHD-EPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVD-DPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKKDMQFK 408
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: W2PEH8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEH8_PHYPN) HSP 1 Score: 110 bits (276), Expect = 1.700e-25 Identity = 76/238 (31.93%), Postives = 122/238 (51.26%), Query Frame = 1 Query: 28 EACFYLIRGRDRMRMFPGK-ERVGSIKIQHKSNIPRVMFICAVSRPDPSGD----FDGKIGIWRVCVIKRVQRNSARR-----EHLDVTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLR 711 E FYL ++ R + G E + +++K+ I +VMF+ AV+RP +DGKIG+W V + +R+S R E + + YR +P++K + W G+ V Q D A PH D E+ DGGW++++ PQPA SPD N NDLGFFA ++S + T LV V+ YN + +T+++V+ +L + G N +++ H +K++LR Sbjct: 22 EKWFYL--KKENQRFYLGTHEEPPHLTVKNKNYIVKVMFLVAVARPRWDSKRHRIWDGKIGLWPFVVYEPAERSSKNRPAGTLELKTYNVDKDVYRHALCRMVIPSVK--VVWPSGKRVFLQHDNAKPHVAAD-DPEVVAACSDGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVNNVEEAYNQLEYSTIDKVFVTLQSVLQASMNVDGCNKYQLPHL-SKEQLR 253
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: UPI001C2701CF (uncharacterized protein LOC121760366 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2701CF) HSP 1 Score: 112 bits (280), Expect = 4.680e-25 Identity = 77/253 (30.43%), Postives = 118/253 (46.64%), Query Frame = 1 Query: 16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRP----DPSGDFDGKIGIWRVCVIKRVQRNSARREHLDV---TIHA---EWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKID 744 + IDE FY+ + DR + P ++ + K I +VMF+CAVSRP D +DGK+GI+ + QR S R + +H+ E R+ + +PA+K +D+ QQD A PH + E + G+ + L+ QPA SPD N DLGFF ++S + T LV V + TL RV+ SL +L+ GGN ++V H + R LP ++++ Sbjct: 169 VHIDEKWFYMTKASDRYYLLPDEDEPYRA-CKSKRFITKVMFMCAVSRPHFGMDGQPTYDGKVGIFPFTEVMPTQRRSKNRPRGTMETKAVHSVTKEVMRDCLINKIIPAIKARWPVWASKDIYIQQDNATPHITA-MDPEFQAVANSDGFRIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSYFAELSPQTLNRVFLSLQACLTEILRCRGGNGYKVPHINKDRLQRTVGLPNQLEVE 419
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA) HSP 1 Score: 111 bits (277), Expect = 6.130e-25 Identity = 73/248 (29.44%), Postives = 120/248 (48.39%), Query Frame = 1 Query: 4 VSEKIRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRPDPSGDF------DGKIGIWRVCVIKRVQRNSARREH-----LDVTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRA 714 V + + ++E FY+ + R ++ E + K+Q K +I +VMF+CAV+RP DF DGKIG+W + K R S R+ + +T+ YR D +PA++ G + QQ+ A PH D + E+ R GWN+ LV QPA SP+ N DLGFF ++S T L+ V+ Y++ + ++ + +L K K G N +++ H + +L++ Sbjct: 99 VLDYVHLNEKWFYITQINHRDYLWHD-EPIPQRKVQSKRHITKVMFLCAVARP--RFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHVAVDDA-EVVAASRKNGWNIQLVAQPAMSPNFNVLDLGFFNAIQSLQHQTAMRTIDDLIASVQDAYSSLASQVWDKTFMTLQKVMEEAFKLEGDNIYKLPHLKKDLQLKS 342 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13300.2071.1 >prot_H-paniculata_contig13300.2071.1 ID=prot_H-paniculata_contig13300.2071.1|Name=mRNA_H-paniculata_contig13300.2071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp AVSEKIRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAback to top mRNA from alignment at H-paniculata_contig13300:3441..4199- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13300.2071.1 ID=mRNA_H-paniculata_contig13300.2071.1|Name=mRNA_H-paniculata_contig13300.2071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=759bp|location=Sequence derived from alignment at H-paniculata_contig13300:3441..4199- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13300:3441..4199- >mRNA_H-paniculata_contig13300.2071.1 ID=mRNA_H-paniculata_contig13300.2071.1|Name=mRNA_H-paniculata_contig13300.2071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1488bp|location=Sequence derived from alignment at H-paniculata_contig13300:3441..4199- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |