mRNA_H-paniculata_contig13300.2071.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13300.2071.1
Unique NamemRNA_H-paniculata_contig13300.2071.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 8.880e-52
Identity = 92/198 (46.46%), Postives = 123/198 (62.12%), Query Frame = 1
Query:   16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRPDPSGDFDGKIGIWRVCVIKRVQRNSAR-------------RE---------------HLDVTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTV 525
            + +DE+ FYL+R ++++R+F G++  G  ++ H+S++P++M I A +RPDP+ DFDGKIGIWR+CVI+  QR+S +             RE                 D TI AEWY++WY D  +PA+KE M WL  + VV QQDGA+PHTGK     LN  G   GW V LV QPAQSPDLN NDLG FA L+  V
Sbjct:  155 VHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRV 352          
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A0W8C4B7_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C4B7_PHYNI)

HSP 1 Score: 119 bits (298), Expect = 2.940e-28
Identity = 80/263 (30.42%), Postives = 126/263 (47.91%), Query Frame = 1
Query:   10 EKIRIDEACFYLIRGRDRMRMFPGKERVGSIK-----IQHKSNIPRVMFICAVSRPDPSGDFDGKIGIWRVCVIKRVQRNSARR-----EHLDVTIHAEWYREWYKDSFVPALKENMSWLEGED--------VVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKID 744
            + + +DE  FY+ +   ++ +  G++           +Q K +I +VMF+CAV+RP   G++DGK+G+W V      QR S  R     E   +++  E YR    +  +PA+K    W+  E         +  QQD A PH   D   E+   G  GGW++    QPAQSPDLN  D GFF  ++S        T   L+  V+R + +    TL + + S+      +++  GGN F + H +  + LRA  LP  +  D
Sbjct:   53 DTVHVDEKWFYVKKIGQKVYLLTGQDGTPCEDAPVQFVQSKRHILKVMFLCAVARP--RGNWDGKVGMWPVVEKYVTQRRSVNRDAGVEELRPISMTREVYRRMLLEDVIPAIKAKWEWVRDEGLGVPLVSPIWVQQDNAKPHVLPD-DPEVLVAGCAGGWSILFRNQPAQSPDLNVLDCGFFNAIQSLQSVTVPRTAEDLISEVERAFASTTTTTLNKTFLSVQLIMQSIMRHNGGNAFGLSHIQKDKLLRAGELPDSLSCD 312          
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A6A4EVK9_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVK9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.880e-27
Identity = 81/265 (30.57%), Postives = 126/265 (47.55%), Query Frame = 1
Query:    4 VSEKIRIDEACFYLIRGRDRMRMFPGK-----ERVGSIKIQHKSNIPRVMFICAVSRPDPSGDFDGKIGIWRVCVIKRVQRNSARR-----EHLDVTIHAEWYREWYKDSFVPALKENMSWLEGED--------VVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKID 744
            + + + +DE  F+L +   ++ +  G      E      ++ K +I +VMF+CAV+RP   GD+DGK+GIW V      QR S  R     E   VT+  E YR    +  + A+K    W++  +        +  QQD A PH       E+  LG   GW + +  QPAQSPDLN  D GFF  ++S   +    +T  L++ V+  +      TL + + S+     +++K  GGN F + H    + LRA  LP  +  D
Sbjct:  158 MDDTVHVDEKWFFLKKVGQKVYILTGLDGEPCEEAPVQYLRSKRHIVKVMFLCAVARP--RGDWDGKVGIWPVVEEYVTQRKSVNRDAGVIELRPVTMTREIYRRMLIEDVILAIKSKWEWIKDAEHGVPLKVPIRLQQDNAKPHV-LPHDPEVMALGCSDGWKILVTAQPAQSPDLNALDCGFFHAIQSLQSFTTPRSTVDLIKEVEEAFQNTTYTTLNKTFLSIQLIMANIMKHDGGNSFPLSHFHKDKLLRAGKLPVAIPCD 419          
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: UPI000B8AB67D (uncharacterized protein LOC110800636 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AB67D)

HSP 1 Score: 117 bits (292), Expect = 2.240e-26
Identity = 78/252 (30.95%), Postives = 122/252 (48.41%), Query Frame = 1
Query:   16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRP--DPSGD--FDGKIGIWRVCVIKRVQRNSARREHLDVTIHA------EWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKI 741
            I IDE  FY+ R   R  +  G+E       Q+ + + +VMF+C ++RP    +G+  FDGK+GI+        +R+S  RE   + I A      E  R    D  +PA++    W   +D++ QQD + PH   + +  L+   ++ G+N+ L+ QP QSPDLN  DLGFF  ++S    +       LV+ VK  Y AYD   +   W  L      +L   GGN+++  H    +      LP  V++
Sbjct:  272 IHIDEKWFYMSRKTQRYYLLAGEEEPYRAT-QNSNYLVKVMFLCGIARPIIGYNGEVLFDGKLGIFPFTEEVPAKRSSKNRERGTIEIKAITSVTKEVIRRKIIDELLPAIRSKWPWFASKDILIQQDNSRPHINPNDAEFLDAATQE-GFNIQLICQPPQSPDLNVLDLGFFRAIQSLQHQKFPRDVEALVKAVKEAYEAYDPKLINYTWLQLQYVMLEILGVKGGNNYKSPHKGKAKMDNLGLLPDTVEV 521          
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.570e-26
Identity = 75/254 (29.53%), Postives = 123/254 (48.43%), Query Frame = 1
Query:   10 EKIRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRPDPSGD----FDGKIGIWRVCVIKRVQRNSARREHLD-----VTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKID 744
            + + IDE  FY+ +   R  ++   E V + K + K +I +VMF+ AV+RP         +DG+IG+W     +   R+S  R+  D      T+  + YR +  D  +PA++      +   +  QQD A PH   +    +   GR GGW ++L  QPAQSPDLN  DLG+F  ++S        T   LV  V + +   +   L++ + +L K    + K  G NDF++ H +    ++   LP  ++ D
Sbjct:   43 DTVHIDEKWFYVTKQNRRYYLW-SDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLDKTFMTLQKVMECIFKMGGDNDFKLPHQKKHGLVKEGPLPTRLECD 294          
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV)

HSP 1 Score: 114 bits (286), Expect = 1.150e-25
Identity = 85/254 (33.46%), Postives = 126/254 (49.61%), Query Frame = 1
Query:   16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRP--DPSGD--FDGKIGIWRVCVIKRVQRNSARR------EHLDVTIHAEWYREWYKDSFVPALKENMSWLEG--EDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKI 741
            I IDE  F++ +   R  +   +E       Q K+ I +VMF+ A++RP   P+GD  +DGKIGI+      R QR SA R      +    +I  E  RE   +  +PA++    W E   +++  QQD A PH  +    E  E  R+GG+ +N++ QPAQSPDLN  DLGFF  ++S        T   L++ V+  Y  Y+   +   W  L      +LK  GGN+++  H   K+  R   LP  V+I
Sbjct:  235 IHIDEKWFFMSKITQRFYLL-SEEEDPYRACQSKAFITKVMFLAAIARPWLGPTGDILWDGKIGIFPFIDEVRAQRWSANRPAGTIEKKAKQSITKETIREMIINKLLPAIR--AKWPENGCKEIWIQQDNARPHI-QPNDAEFLEACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEI 484          
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.420e-25
Identity = 71/241 (29.46%), Postives = 116/241 (48.13%), Query Frame = 1
Query:   16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRPDPSGD----FDGKIGIWRVCVIKRVQRNSARREH-----LDVTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLR 711
            + IDE  FY+ +   R  ++   E     K Q K +I +VMF+CAV+RP         +DGK+G+W     +  +R S  R+      + +T+    YR +  D  +PA++       G  +  QQD A PH   D   E+   GR  GWN+ L+ QPAQSPD N  DLGFF  ++S        T   L++ V+  +       L++ + +L K     +++ G N +++ H +   + +
Sbjct:  170 VHIDEKWFYITQVNRRFYLWHD-EPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVD-DPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKKDMQFK 408          
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: W2PEH8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEH8_PHYPN)

HSP 1 Score: 110 bits (276), Expect = 1.700e-25
Identity = 76/238 (31.93%), Postives = 122/238 (51.26%), Query Frame = 1
Query:   28 EACFYLIRGRDRMRMFPGK-ERVGSIKIQHKSNIPRVMFICAVSRPDPSGD----FDGKIGIWRVCVIKRVQRNSARR-----EHLDVTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLR 711
            E  FYL   ++  R + G  E    + +++K+ I +VMF+ AV+RP         +DGKIG+W   V +  +R+S  R     E     +  + YR       +P++K  + W  G+ V  Q D A PH   D   E+     DGGW++++ PQPA SPD N NDLGFFA ++S    +   T   LV  V+  YN  + +T+++V+ +L       +   G N +++ H  +K++LR
Sbjct:   22 EKWFYL--KKENQRFYLGTHEEPPHLTVKNKNYIVKVMFLVAVARPRWDSKRHRIWDGKIGLWPFVVYEPAERSSKNRPAGTLELKTYNVDKDVYRHALCRMVIPSVK--VVWPSGKRVFLQHDNAKPHVAAD-DPEVVAACSDGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVNNVEEAYNQLEYSTIDKVFVTLQSVLQASMNVDGCNKYQLPHL-SKEQLR 253          
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: UPI001C2701CF (uncharacterized protein LOC121760366 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2701CF)

HSP 1 Score: 112 bits (280), Expect = 4.680e-25
Identity = 77/253 (30.43%), Postives = 118/253 (46.64%), Query Frame = 1
Query:   16 IRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRP----DPSGDFDGKIGIWRVCVIKRVQRNSARREHLDV---TIHA---EWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKID 744
            + IDE  FY+ +  DR  + P ++       + K  I +VMF+CAVSRP    D    +DGK+GI+    +   QR S  R    +    +H+   E  R+   +  +PA+K        +D+  QQD A PH    +  E   +    G+ + L+ QPA SPD N  DLGFF  ++S    +   T   LV  V   +      TL RV+ SL      +L+  GGN ++V H    +  R   LP  ++++
Sbjct:  169 VHIDEKWFYMTKASDRYYLLPDEDEPYRA-CKSKRFITKVMFMCAVSRPHFGMDGQPTYDGKVGIFPFTEVMPTQRRSKNRPRGTMETKAVHSVTKEVMRDCLINKIIPAIKARWPVWASKDIYIQQDNATPHITA-MDPEFQAVANSDGFRIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSYFAELSPQTLNRVFLSLQACLTEILRCRGGNGYKVPHINKDRLQRTVGLPNQLEVE 419          
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.130e-25
Identity = 73/248 (29.44%), Postives = 120/248 (48.39%), Query Frame = 1
Query:    4 VSEKIRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICAVSRPDPSGDF------DGKIGIWRVCVIKRVQRNSARREH-----LDVTIHAEWYREWYKDSFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNLVPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAATLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRA 714
            V + + ++E  FY+ +   R  ++   E +   K+Q K +I +VMF+CAV+RP    DF      DGKIG+W +   K   R S  R+      + +T+    YR    D  +PA++       G  +  QQ+ A PH   D + E+    R  GWN+ LV QPA SP+ N  DLGFF  ++S        T   L+  V+  Y++  +   ++ + +L K      K  G N +++ H +   +L++
Sbjct:   99 VLDYVHLNEKWFYITQINHRDYLWHD-EPIPQRKVQSKRHITKVMFLCAVARP--RFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHVAVDDA-EVVAASRKNGWNIQLVAQPAMSPNFNVLDLGFFNAIQSLQHQTAMRTIDDLIASVQDAYSSLASQVWDKTFMTLQKVMEEAFKLEGDNIYKLPHLKKDLQLKS 342          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13300.2071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE8.880e-5246.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0W8C4B7_PHYNI2.940e-2830.42Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A6A4EVK9_9STRA4.880e-2730.57Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
UPI000B8AB67D2.240e-2630.95uncharacterized protein LOC110800636 n=1 Tax=Spina... [more]
A0A6A4Z9D8_9STRA2.570e-2629.53Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
J3S7K7_BETVV1.150e-2533.46Mariner transposase n=2 Tax=Beta vulgaris subsp. v... [more]
A0A6A5AA16_9STRA1.420e-2529.46Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
W2PEH8_PHYPN1.700e-2531.93Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
UPI001C2701CF4.680e-2530.43uncharacterized protein LOC121760366 n=3 Tax=Salvi... [more]
W4GGI5_9STRA6.130e-2529.44Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13300contigH-paniculata_contig13300:3441..4199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.4
Seed ortholog evalue2.4e-24
Seed eggNOG ortholog157072.XP_008866696.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMKC@1,2QQNW@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size744
Cds size744
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929054.760205-CDS-H-paniculata_contig13300:3440..39341622929054.760205-CDS-H-paniculata_contig13300:3440..3934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13300 3441..3934 -
1691480713.9771075-CDS-H-paniculata_contig13300:3440..39341691480713.9771075-CDS-H-paniculata_contig13300:3440..3934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13300 3441..3934 -
1622929054.77676-CDS-H-paniculata_contig13300:3949..41991622929054.77676-CDS-H-paniculata_contig13300:3949..4199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13300 3950..4199 -
1691480713.9886365-CDS-H-paniculata_contig13300:3949..41991691480713.9886365-CDS-H-paniculata_contig13300:3949..4199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13300 3950..4199 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13300.2071.1prot_H-paniculata_contig13300.2071.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13300 3441..4199 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13300.2071.1

>prot_H-paniculata_contig13300.2071.1 ID=prot_H-paniculata_contig13300.2071.1|Name=mRNA_H-paniculata_contig13300.2071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp
AVSEKIRIDEACFYLIRGRDRMRMFPGKERVGSIKIQHKSNIPRVMFICA
VSRPDPSGDFDGKIGIWRVCVIKRVQRNSARREHLDVTIHAEWYREWYKD
SFVPALKENMSWLEGEDVVAQQDGAAPHTGKDISRELNELGRDGGWNVNL
VPQPAQSPDLNTNDLGFFAYLESTVGWECYGTTHGLVEGVKRMYNAYDAA
TLERVWQSLFKRYNHVLKALGGNDFEVQHTETKQRLRAESLPKPVKID
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mRNA from alignment at H-paniculata_contig13300:3441..4199-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13300.2071.1 ID=mRNA_H-paniculata_contig13300.2071.1|Name=mRNA_H-paniculata_contig13300.2071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=759bp|location=Sequence derived from alignment at H-paniculata_contig13300:3441..4199- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGGTTTCCGAAAAAATTCGCATCGACGAAGCGTGCTTTTACCTAATTCG CGGCAGGGATCGCATGCGCATGTTCCCCGGGAAGGAAAGGGTGGGGTCCA TCAAAATACAGCACAAGAGTAATATTCCTAGGGTAATGTTCATCTGCGCC GTTTCGCGTCCAGATCCTTCCGGCGATTTCGACGGCAAGATTGGAATCTG GCGTGTTTGCGTCATCAAGCGGGTGCAGAGGAATTCGGCCCGGCGTGAAC GTGGGTAACAATAAGATCTCGATGTGACCATTCACGCCGAGTGGTACCGG GAGTGGTACAAGGACTCTTTTGTCCCAGCATTAAAGGAAAATATGTCATG GTTGGAGGGTGAGGATGTGGTCGCACAGCAGGACGGAGCGGCCCCCCACA CCGGGAAAGACATATCGCGGGAGCTCAACGAACTCGGGAGGGACGGGGGG TGGAACGTTAATCTCGTACCTCAGCCTGCGCAGTCACCAGATCTCAACAC CAACGATTTGGGGTTCTTTGCATATCTGGAAAGTACGGTTGGATGGGAGT GTTACGGTACGACACACGGCCTTGTGGAGGGCGTGAAGAGGATGTACAAT GCGTACGACGCGGCAACCTTAGAGAGAGTGTGGCAGAGCCTCTTTAAGCG GTACAATCACGTCTTGAAAGCGCTAGGAGGTAACGATTTCGAGGTACAGC ACACCGAAACCAAGCAAAGGCTGCGTGCGGAAAGTCTGCCAAAACCGGTC AAAATCGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig13300:3441..4199-

>mRNA_H-paniculata_contig13300.2071.1 ID=mRNA_H-paniculata_contig13300.2071.1|Name=mRNA_H-paniculata_contig13300.2071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1488bp|location=Sequence derived from alignment at H-paniculata_contig13300:3441..4199- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGGTTTCCGAAAAAATTCGCATCGACGAAGCGTGCTTTTACCTAATTCG
CGGCAGGGATCGCATGCGCATGTTCCCCGGGAAGGAAAGGGTGGGGTCCA
TCAAAATACAGCACAAGAGTAATATTCCTAGGGTAATGTTCATCTGCGCC
GTTTCGCGTCCAGATCCTTCCGGCGATTTCGACGGCAAGATTGGAATCTG
GCGTGTTTGCGTCATCAAGCGGGTGCAGAGGAATTCGGCCCGGCGTGAAC
GCGGTTTCCGAAAAAATTCGCATCGACGAAGCGTGCTTTTACCTAATTCG
CGGCAGGGATCGCATGCGCATGTTCCCCGGGAAGGAAAGGGTGGGGTCCA
TCAAAATACAGCACAAGAGTAATATTCCTAGGGTAATGTTCATCTGCGCC
GTTTCGCGTCCAGATCCTTCCGGCGATTTCGACGGCAAGATTGGAATCTG
GCGTGTTTGCGTCATCAAGCGGGTGCAGAGGAATTCGGCCCGGCGTGAAC
ATCTCGATGTGACCATTCACGCCGAGTGGTACCGGGAGTGGTACAAGGAC
TCTTTTGTCCCAGCATTAAAGGAAAATATGTCATGGTTGGAGGGTGAGGA
TGTGGTCGCACAGCAGGACGGAGCGGCCCCCCACACCGGGAAAGACATAT
CGCGGGAGCTCAACGAACTCGGGAGGGACGGGGGGTGGAACGTTAATCTC
GTACCTCAGCCTGCGCAGTCACCAGATCTCAACACCAACGATTTGGGGTT
CTTTGCATATCTGGAAAGTACGGTTGGATGGGAGTGTTACGGTACGACAC
ACGGCCTTGTGGAGGGCGTGAAGAGGATGTACAATGCGTACGACGCGGCA
ACCTTAGAGAGAGTGTGGCAGAGCCTCTTTAAGCGGTACAATCACGTCTT
GAAAGCGCTAGGAGGTAACGATTTCGAGGTACAGCACACCGAAACCAAGC
AAAGGCTGCGTGCGGAAAGTCTGCCAAAACCGGTCAAAATCGACATCTCG
ATGTGACCATTCACGCCGAGTGGTACCGGGAGTGGTACAAGGACTCTTTT
GTCCCAGCATTAAAGGAAAATATGTCATGGTTGGAGGGTGAGGATGTGGT
CGCACAGCAGGACGGAGCGGCCCCCCACACCGGGAAAGACATATCGCGGG
AGCTCAACGAACTCGGGAGGGACGGGGGGTGGAACGTTAATCTCGTACCT
CAGCCTGCGCAGTCACCAGATCTCAACACCAACGATTTGGGGTTCTTTGC
ATATCTGGAAAGTACGGTTGGATGGGAGTGTTACGGTACGACACACGGCC
TTGTGGAGGGCGTGAAGAGGATGTACAATGCGTACGACGCGGCAACCTTA
GAGAGAGTGTGGCAGAGCCTCTTTAAGCGGTACAATCACGTCTTGAAAGC
GCTAGGAGGTAACGATTTCGAGGTACAGCACACCGAAACCAAGCAAAGGC
TGCGTGCGGAAAGTCTGCCAAAACCGGTCAAAATCGAC
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