mRNA_H-paniculata_contig13284.2053.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13284.2053.1
Unique NamemRNA_H-paniculata_contig13284.2053.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.940e-42
Identity = 79/189 (41.80%), Postives = 110/189 (58.20%), Query Frame = 1
Query:   22 VLEGDRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRPDPSRDFNGKIETWRVFVKQAQRNSAQRKRG------------------------QQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIW 516
            + E ++VR+F  E+  G  +V H+SH+P++M I   +RPDP+ DF+GKI  WR+ V +  + S+++                           ++ EFD TIDAEWY++WY D  +PA+K+ MP L  + VV QQ GA+ H GK  P  LN  G   GW V L+TQPAQSPDL +ND   FASL  R+W
Sbjct:  165 MREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVW 353          
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 100 bits (249), Expect = 8.320e-20
Identity = 63/212 (29.72%), Postives = 101/212 (47.64%), Query Frame = 1
Query:   58 EERMGSTKVQHKSHIPRVMFICVISRPDPS----RDFNGKIETWRVFVKQ-AQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHI 678
            +E     K Q K HI +VMF+C ++RP       + ++GK+  W     Q A+R S  R RG      +T+    Y+ +  D  IPA++   P   G  +  QQ  A  H+  D P  L   GR EGWN+ L+ QPAQSPD  + D  FF ++ S   +     I D ++  +  +       L+K   +L K   + +++   N +++ H+
Sbjct:  191 DEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHL 401          
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.420e-19
Identity = 72/239 (30.13%), Postives = 112/239 (46.86%), Query Frame = 1
Query:   22 VLEGDRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRP----DPSRDFNGKIETWR-VFVKQAQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSV 723
             L   R  ++ DE+ +   K   K HI +VMF+  ++RP       R ++GKI  W  V V  AQR S  R+RG      VT+  + Y+E+  ++ IP +K+  P      +  QQ  A  H+  D    +   G  +GW++ L+ QPA SPD  + D  FF S+ +   RE    I D V      ++  D   L+K   +L +   + LK    N F++ H +  K  R G + + V
Sbjct:  180 TLVNRRYYLWHDED-VPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDDAA-VTLAGHSDGWSIQLVAQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLDWSVLDKTFMTLQRVMGEALKMGGDNAFKLPHSKKDKTARLGPVARVV 416          
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A397C8F5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C8F5_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.940e-19
Identity = 70/227 (30.84%), Postives = 106/227 (46.70%), Query Frame = 1
Query:   58 EERMGSTKVQHKSHIPRVMFICVISRP--DPSRD--FNGKIETWR-VFVKQAQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSV 723
            +E +   K   K HI +VMF+  ++RP  D  R   ++GK+  W  V V+ AQR S  R RG      VT+  + Y+E+   + IP +K   P    + +  QQ  A  H+  D P  +   GR +GW + L+ QPA SPD  + D  FF S+ +   R+    I D V      +N  D   L+K   +L +   + +K    N +++ H    K  R G    SV
Sbjct:   56 DEAIPVRKCSSKRHIVKVMFLTAVARPRFDYVRKTMWDGKLGMWPFVAVQPAQRTSKNRDRGTLVTTPVTVTKKVYREYLLQHVIPRIKAVWPGHRDQPIYIQQDNARPHVEVDDPAVV-AAGRSDGWAIQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTGIDDLVAAVHGAFNELDWRILDKTFVTLVRVMEESMKMGGDNSYKLPHQSKDKMARLGPTAPSV 281          
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: UPI001C256EBA (uncharacterized protein LOC121779336 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C256EBA)

HSP 1 Score: 95.9 bits (237), Expect = 3.050e-18
Identity = 66/250 (26.40%), Postives = 116/250 (46.40%), Query Frame = 1
Query:   34 DRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRPD--PSRD--FNGKIETWRVFVKQ--AQRNSAQRKRGQQDEFDV-TIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDREAFGVAVEW 762
            DR  + PDEE       + K  I +VMF+C + RP   P+ +  F+GK+  +  F +   AQRNS  R RG  +   +  +     +EW  +  IPA+    P    +E+  QQ  A  H+    P +  +     G+ + LI QP  SPD  + D  FF ++ S   ++    + + ++     Y      TL KV  +L    +++L+   GN++++ H+   +  R G LP  ++++       +E+
Sbjct:  182 DRYYLLPDEEE-PQRSCRSKRFITKVMFLCAVGRPHFGPNGETLFDGKLGIF-PFTEMVPAQRNSKNRPRGTLETKPIPAVTQAVTREWLINKIIPAIHSKWPTSASKEIYIQQDNAKPHISTTDP-EFEEAANSNGFKIQLICQPPNSPDTNILDLGFFRAIQSLKDKKACSNVDELLQNVSMAYEELTPQTLNKVFLTLQSVLSEILEVQGGNNYKIPHMNKDRLERIGALPNVLEVEERVVRDVLEY 428          
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.530e-18
Identity = 64/232 (27.59%), Postives = 106/232 (45.69%), Query Frame = 1
Query:   58 EERMGSTKVQHKSHIPRVMFICVISRP--DPSRD--FNGKIETWRVF-VKQAQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDRE 738
            +E +   KVQ K HI +VMF+C ++RP  D  R   ++GKI  W +   K A R S  R RG      +T+    Y+    D  IPA++   P   G  +  QQ  A  H+  D    +    R  GWN+ L+ QPA SP+  + D  FF ++ S   +     I D +   +  Y++  +   +K   +L K   +  K    N +++ H++   + ++G +      D +
Sbjct:  124 DEPIPQRKVQSKRHITKVMFLCAVARPRFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHVAVDDAEVV-AASRKNGWNIQLVAQPAMSPNFNVLDLGFFNAIQSLQHQTAMRTIDDLIASVQDAYSSLASQVWDKTFMTLQKVMEEAFKLEGDNIYKLPHLKKDLQLKSGTVALRPPCDED 354          
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: UPI001C2701CF (uncharacterized protein LOC121760366 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2701CF)

HSP 1 Score: 95.1 bits (235), Expect = 5.650e-18
Identity = 67/249 (26.91%), Postives = 114/249 (45.78%), Query Frame = 1
Query:   34 DRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRP----DPSRDFNGKIETWRVF-VKQAQRNSAQRKRGQQDEFDV-TIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDREAFGVAVEW 762
            DR  + PDE+       + K  I +VMF+C +SRP    D    ++GK+  +    V   QR S  R RG  +   V ++  E  ++   +  IPA+K   P    +++  QQ  AT H+    P +   +   +G+ + LI QPA SPD  + D  FF ++ S  + +    + + V    S +      TL +V  SL     ++L+   GN ++V HI   +  R   LP  ++++       ++W
Sbjct:  183 DRYYLLPDEDEPYRA-CKSKRFITKVMFMCAVSRPHFGMDGQPTYDGKVGIFPFTEVMPTQRRSKNRPRGTMETKAVHSVTKEVMRDCLINKIIPAIKARWPVWASKDIYIQQDNATPHITAMDP-EFQAVANSDGFRIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSYFAELSPQTLNRVFLSLQACLTEILRCRGGNGYKVPHINKDRLQRTVGLPNQLEVEEGVVREVLQW 429          
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25)

HSP 1 Score: 94.4 bits (233), Expect = 8.140e-18
Identity = 70/242 (28.93%), Postives = 117/242 (48.35%), Query Frame = 1
Query:   34 DRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRP----DPSRDFNGKIETWRVF-VKQAQRNSAQRKRGQQDEFDV-TIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEG-AKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDRE 738
            DR  + PDE+    +  + K +I +VMF+C +SRP    +    ++GK+  +    V  AQR S  R RG  +   + ++     ++      IPA+K   P    +++  QQ  AT H+    P +   + + +G+++ LI QP  SPD  + D  FF ++ S +  E+    VD + G   S +      TL KV  SL     ++L    GN ++V HI   + HR G LP  +++D +
Sbjct:  146 DRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGASKDIYIQQDNATPHITAMDP-EFQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQS-LQHEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEILHCRGGNGYKVPHINKDRLHRNGGLPNVLEVDED 384          
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A397CBJ2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CBJ2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 9.020e-18
Identity = 66/239 (27.62%), Postives = 113/239 (47.28%), Query Frame = 1
Query:   61 ERMGSTKVQHKSHIPRVMFICVISRP--DPSRD--FNGKIETWRVF-VKQAQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDREAFGVAVEW 762
            E++     + K H+ +V+F+  ++RP  D ++   F+GKI TW    V  AQR S +R  G      VT+  + Y+    D  IPA++   P  E + V  QQ  A  H+   +   +    +  GW++ ++ QP  SPDL + D  FF ++ +    +    I D V    + + A    TL K   +L +   +V+    GND+++ H++       G LP+ V  +R A+ V   +
Sbjct:  192 EKIKQRSCKSKRHLLKVIFLSAVARPRWDQAKGEWFDGKIGTWHFTEVVPAQRRSCRRDAGTPAMKTVTVTRDTYKAMIIDNVIPAIRSKWPSDETKRVKIQQDNARPHV-PPSDAAIVAACKAMGWDMEVVFQPPNSPDLNVLDLGFFRAIQTLQVEKHSSSIEDIVAATDAAWAAVSTTTLNKNFLTLQRCLQEVILDTGGNDYKIPHMKKDVLLARGRLPEMVSCERNAWRVGCAY 429          
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A6A5ABP8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABP8_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.000e-17
Identity = 72/244 (29.51%), Postives = 110/244 (45.08%), Query Frame = 1
Query:   37 RVRMFPDEERMGSTKVQHKSHIPRVMFICVISRP----DPSRDFNGKIETWRVFVKQ--AQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDREAFGV 750
            R  ++ DE+ +   K   K HI +VMF+  ++RP         ++GKI  W  FV +  AQR S  R RG      +T+    Y+++  +  I  +KQ  P      V  QQ  A  H+  D   ++   G   GW V L+ QPA SPD  + D  FF S+ +   R+    I D V    + ++  D  TL+K   +L K   + LK    N +++ H+   K  R G L   +  D +  G 
Sbjct:    5 RYYLWHDED-LPVRKCSSKRHIIKVMFLTAVARPCYDHGSKTMWDGKIGMW-PFVSEVPAQRKSKNRPRGTMVTAPITVTKPVYRDFLVNKVILRIKQVWPGRRDVPVFIQQDNARPHVQVDD-LEVATAGTIGGWRVQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTCIDDLVAAVHAAFDELDFRTLDKTFMTLQKVMEESLKVGGDNTYKLPHLHKDKLARQGLLTSQLACDPDVAGA 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE1.940e-4241.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A5AA16_9STRA8.320e-2029.72Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A485KDC6_9STRA1.420e-1930.13Aste57867_3131 protein n=1 Tax=Aphanomyces stellat... [more]
A0A397C8F5_9STRA2.940e-1930.84Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI001C256EBA3.050e-1826.40uncharacterized protein LOC121779336 n=3 Tax=Salvi... [more]
W4GGI5_9STRA3.530e-1827.59Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
UPI001C2701CF5.650e-1826.91uncharacterized protein LOC121760366 n=3 Tax=Salvi... [more]
UPI001C264D258.140e-1828.93uncharacterized protein LOC121774216 n=2 Tax=Salvi... [more]
A0A397CBJ2_9STRA9.020e-1827.62Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A6A5ABP8_9STRA1.000e-1729.51Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13284contigH-paniculata_contig13284:1159..4335 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score70.1
Seed ortholog evalue9.3e-10
Seed eggNOG ortholog4792.ETI47947
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMKC@1,2QQNW@2759,3QH7V@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1056
Cds size417
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13284.2053.1prot_H-paniculata_contig13284.2053.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13284 3652..4068 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929052.2857485-UTR-H-paniculata_contig13284:1158..11901622929052.2857485-UTR-H-paniculata_contig13284:1158..1190Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13284 1159..1190 +
1691480713.0859063-UTR-H-paniculata_contig13284:1158..11901691480713.0859063-UTR-H-paniculata_contig13284:1158..1190Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13284 1159..1190 +
1622929052.302267-UTR-H-paniculata_contig13284:3311..36511622929052.302267-UTR-H-paniculata_contig13284:3311..3651Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13284 3312..3651 +
1691480713.0962987-UTR-H-paniculata_contig13284:3311..36511691480713.0962987-UTR-H-paniculata_contig13284:3311..3651Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13284 3312..3651 +
1622929052.341186-UTR-H-paniculata_contig13284:4068..43351622929052.341186-UTR-H-paniculata_contig13284:4068..4335Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13284 4069..4335 +
1691480713.113399-UTR-H-paniculata_contig13284:4068..43351691480713.113399-UTR-H-paniculata_contig13284:4068..4335Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13284 4069..4335 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929052.3226035-CDS-H-paniculata_contig13284:3651..40681622929052.3226035-CDS-H-paniculata_contig13284:3651..4068Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13284 3652..4068 +
1691480713.1048455-CDS-H-paniculata_contig13284:3651..40681691480713.1048455-CDS-H-paniculata_contig13284:3651..4068Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13284 3652..4068 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13284.2053.1

>prot_H-paniculata_contig13284.2053.1 ID=prot_H-paniculata_contig13284.2053.1|Name=mRNA_H-paniculata_contig13284.2053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp
MGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRE
RYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVH
HIETKKRHRAGNLPKSVKIDREAFGVAVEWWIDGNGES*
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mRNA from alignment at H-paniculata_contig13284:1159..4335+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13284.2053.1 ID=mRNA_H-paniculata_contig13284.2053.1|Name=mRNA_H-paniculata_contig13284.2053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3177bp|location=Sequence derived from alignment at H-paniculata_contig13284:1159..4335+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAAGACGTTGAAGGCTGAAGGTTTTAGAGGGGTACGTGTTGGTTATGTT GGCTGGGCATGAAAGGAAGGAGGGCGCGTGAGGGGAGGGACGGGGGGTGG GCTGCAGTTGTATACACTTACCAGCATAATAAATCCGCCAGTTAGTTGAA CTACAACACTGAACCTCATATAACAACTCCAGTGTAGCCATGTTGAGGTT AAGCAGCTAACTTTAATCTGCAAATCAGATTCACCTATCACCAACATTGA ATCAATAAGGGGGCACACTCCTTCACAAATCAACCCATATCCCATATTAA ATAGGACTATAACGCTCATATAATAACTCTGTCGTCGTCGTGGTTATGTC GAGGTTATGCAGCTGACCTAATTTTTTCATGTGTACACTTGCCAGCAAAT AGATGATCGATAAGGGGGCACAGACCTGGCATGAGTTAGACATGGACTAC TGGTACAGACCAAAATACAGGCAGTCAGGGGATGAGTACTACTTAGCAAA GTACGAGCCTAAACAACGCATGAAGTATTACACCTCGACAAATACGAATA CTTGACGTATTTGCCACAAACATTGAACAGTGTTCGCCTGAGTTTCAGCA TGAGCTCGTGTACTCTATGTGCCCCGGACCATCCACGACCCCTAATAATA CTCGTAAATCGAATGGACAGTGGTGGGTACGTCCTTCCATGTGCCCGCTC ATTCTGAAACTCGGGTGAATACTTCCAGTATTTGTCCGGGGGATGAATTT GGCCAAGTGTCACAGCAGAAGCTTCAAATTTGCGGGCATAATCGTCATGT TTTTTACCCATCACATTTTGTGAATGTGTCATCCAATTCGAAACCCAGCG TCATGCGTACAGGCGGACTCAGCAGGTGAACACCGCGGCCACATTGGGTA TAGGCACACGTTGACGTGTTGGATCAATCGCACGCTGAAATTAGATCAAA ATTGAAACTCTTCCGGCAGGTAACTCCCCCTCCACCCACTCACCCCATAT GAGCATGACTAGTGTTATTTTATGATGGATGAATATTGCGATCGTAGTAC TAAAAAATCTGCTCTCGTCAAACAATCCATACATGCTACAGATAGTTTTC TCAGTGATGTTTTTGGAGTCGCGTTCAAATTAGGTGTCCTGTTACGATAA ACAGAAGCGCCTTGTTAGTAGAGCCATCTAGGTTCATGTGGGGTCTGATC TGTCTGTTTCATGTACCTTGCCGTTGTCTAGATGTATGCATGTAATTTCG CTGGTTCTAGAGATATTATACTAACGGGTGATGATATACTCCCTCCGTCC CACAAGTCTGCGACGTCACGATTACTCATTTCTGCATGTAGATCGTGCTC ATTTTAATTATTTTCACTATTATTCTAGAACAACTTAGCTCTAGAGCTAA AAAATAGCTCCTTTCGGCTCCAATTTGAGTGGCTGCGCTGCGCCCGGTGG CGGACAAAGCGCCCCCCTATCGTCACACAACATCTCAGCACTTCGCCAAG AGCTGCACGACTCTTGTGCAGCCTGTAGGCCGTCTGTGGCGCGAGTTTCG CAACCAACATTGCCACTCCGGCGCGTCCGGCATCTTTTGCCGAGTGCCCA TCAGCCCAGGGTAAAAATCGCGAGCTGAGCGAGGATTGTCGAAACGCGTT GGCCGTACGATACGCTTTACGCGCTACCTCTCGGTAAGAAGCGGCTTCCG AAAAGCTTTGGGTCAGACTTTTCGGAGCAATTTGAAGTTAGCGACCAATA TGCCAGACAAACTTCGGGCGAGTGTACGAGAACAACTTGACCATGGCAAC ACCCTTTCGCTGAGGTTAACATCACGAAGTGGGCGGTCGTCCGACTTCAC ACCGACAAAGCACGCCACGATTCGAGGGGTCAACGCCGCGAATCAAACCC TGACCCTCGATCAACTCTCTGCCGAGTTTGCCGAAGTTGGTCTCGTAGCC GGTAGCTTAAAGCTTCAGCTGTGGCTCAAAGAGATGGGCGCCACAAGGGT GAAACGGCATAGTACCCCATCTCTCTCGCTGACGCACCGAAAGAACTGGG TAGACTTCATCCCGGACCAATCAGCAAGGAACCGCATGACGTTTAGGAGC GGCTTCCAAACAATTCACATCGAAAAAACGTGGTTTTACCTAATTCGCGA CAGGGATCGCGTCCGCATGTTCCCCGACGAGGAAAGGATGGGCTCCACCA AAGTACAGCACAAGAGTCACATTCCTAGGGTGATGTTCATCTGCGTCATT TCGCGTCCAGATCCTTCCCGCGATTTTAATGGCAAGATTGAAACTTGGCG TGTTTTCGTCAAGCAGGCGCAGAGGAATTCGGCCCAGCGTAAACGGGGGC AGCAAGATGAGTTCGACGTTACCATTGACGCCGAGTGGTACCAGGAGTGG TACAAGGACTATTTTATCCCAGCATTGAAACAAAATATGCCGTGATTGGA GGGTGAGGAAGTGGTCGCGCAGCAGGCCGGAGCGACCTCCCACATGGGGA AAGACACGCCGCGGAAGCTCAACAAACTCGGGAGGGACGAGGGGTGGAAC GTTAATCTCATAACTCAGCCTGCGCAATCACCAGATCTCTACATGAACGA TTTCAGGTTCTTTGCATCTCTGAACAGTAGGATTTGGAGGGAGCGTTACG GTATGATAGTCGACCCTGTGGAGGGGGCAAAGAGCATGTACAATGCTTGC GATGCGGTAACCTTGGAGAAGGTGCTGCAGAGCCTCTTTAAGCGGTACAA TCAGGTCTTGAAGGCGCCAGAAGGTAACGATTTCGAAGTACACCATATCG AAACCAAGAAAAGGCACCGTGCGGGAAATCTGCCAAAGTCGGTCAAAATC GATCGAGAGGCTTTCGGCGTGGCGGTAGAATGGTGGATTGATGGGAATGG GGAAAGCTGAGAATAATAAACTTGACGTGAAAAACACTAAGGAATCCAAA GCAAAAAGAGGTTCTTGATTCGGTCATTGCAACAAGTTATACCCTCAACG TTGCAGACTTACGAGACGGAGGGAGTATTTATATTTTTACTGCGTTGGGG AACGCCGACCATCGTCTGTTCTAGCCCGCCGATATTTTGGACGGGACGCT GTTAATGTGTTTTTCCGGTGTGTCCTTCGGCACGCACTACCCTGGTGCCC GCTCGTTCCTGCTATGTGTGCACGTGC
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Coding sequence (CDS) from alignment at H-paniculata_contig13284:1159..4335+

>mRNA_H-paniculata_contig13284.2053.1 ID=mRNA_H-paniculata_contig13284.2053.1|Name=mRNA_H-paniculata_contig13284.2053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at H-paniculata_contig13284:1159..4335+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGAAAGACACGCCGCGGAAGCTCAACAAACTCGGGAGGGACGAGGG
GTGGAACGTTAATCTCATAACTCAGCCTGCGCAATCACCAGATCTCTACA
TGAACGATTTCAGGTTCTTTGCATCTCTGAACAGTAGGATTTGGAGGGAG
CGTTACGGTATGATAGTCGACCCTGTGGAGGGGGCAAAGAGCATGTACAA
TGCTTGCGATGCGGTAACCTTGGAGAAGGTGCTGCAGAGCCTCTTTAAGC
GGTACAATCAGGTCTTGAAGGCGCCAGAAGGTAACGATTTCGAAGTACAC
CATATCGAAACCAAGAAAAGGCACCGTGCGGGAAATCTGCCAAAGTCGGT
CAAAATCGATCGAGAGGCTTTCGGCGTGGCGGTAGAATGGTGGATTGATG
GGAATGGGGAAAGCTGAATGGGGAAAGACACGCCGCGGAAGCTCAACAAA
CTCGGGAGGGACGAGGGGTGGAACGTTAATCTCATAACTCAGCCTGCGCA
ATCACCAGATCTCTACATGAACGATTTCAGGTTCTTTGCATCTCTGAACA
GTAGGATTTGGAGGGAGCGTTACGGTATGATAGTCGACCCTGTGGAGGGG
GCAAAGAGCATGTACAATGCTTGCGATGCGGTAACCTTGGAGAAGGTGCT
GCAGAGCCTCTTTAAGCGGTACAATCAGGTCTTGAAGGCGCCAGAAGGTA
ACGATTTCGAAGTACACCATATCGAAACCAAGAAAAGGCACCGTGCGGGA
AATCTGCCAAAGTCGGTCAAAATCGATCGAGAGGCTTTCGGCGTGGCGGT
AGAATGGTGGATTGATGGGAATGGGGAAAGCTGA
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