mRNA_H-paniculata_contig13284.2053.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 160 bits (405), Expect = 1.940e-42 Identity = 79/189 (41.80%), Postives = 110/189 (58.20%), Query Frame = 1
Query: 22 VLEGDRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRPDPSRDFNGKIETWRVFVKQAQRNSAQRKRG------------------------QQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIW 516
+ E ++VR+F E+ G +V H+SH+P++M I +RPDP+ DF+GKI WR+ V + + S+++ ++ EFD TIDAEWY++WY D +PA+K+ MP L + VV QQ GA+ H GK P LN G GW V L+TQPAQSPDL +ND FASL R+W
Sbjct: 165 MREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVW 353
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 100 bits (249), Expect = 8.320e-20 Identity = 63/212 (29.72%), Postives = 101/212 (47.64%), Query Frame = 1
Query: 58 EERMGSTKVQHKSHIPRVMFICVISRPDPS----RDFNGKIETWRVFVKQ-AQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHI 678
+E K Q K HI +VMF+C ++RP + ++GK+ W Q A+R S R RG +T+ Y+ + D IPA++ P G + QQ A H+ D P L GR EGWN+ L+ QPAQSPD + D FF ++ S + I D ++ + + L+K +L K + +++ N +++ H+
Sbjct: 191 DEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHL 401
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.420e-19 Identity = 72/239 (30.13%), Postives = 112/239 (46.86%), Query Frame = 1
Query: 22 VLEGDRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRP----DPSRDFNGKIETWR-VFVKQAQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSV 723
L R ++ DE+ + K K HI +VMF+ ++RP R ++GKI W V V AQR S R+RG VT+ + Y+E+ ++ IP +K+ P + QQ A H+ D + G +GW++ L+ QPA SPD + D FF S+ + RE I D V ++ D L+K +L + + LK N F++ H + K R G + + V
Sbjct: 180 TLVNRRYYLWHDED-VPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDDAA-VTLAGHSDGWSIQLVAQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLDWSVLDKTFMTLQRVMGEALKMGGDNAFKLPHSKKDKTARLGPVARVV 416
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A397C8F5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C8F5_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.940e-19 Identity = 70/227 (30.84%), Postives = 106/227 (46.70%), Query Frame = 1
Query: 58 EERMGSTKVQHKSHIPRVMFICVISRP--DPSRD--FNGKIETWR-VFVKQAQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSV 723
+E + K K HI +VMF+ ++RP D R ++GK+ W V V+ AQR S R RG VT+ + Y+E+ + IP +K P + + QQ A H+ D P + GR +GW + L+ QPA SPD + D FF S+ + R+ I D V +N D L+K +L + + +K N +++ H K R G SV
Sbjct: 56 DEAIPVRKCSSKRHIVKVMFLTAVARPRFDYVRKTMWDGKLGMWPFVAVQPAQRTSKNRDRGTLVTTPVTVTKKVYREYLLQHVIPRIKAVWPGHRDQPIYIQQDNARPHVEVDDPAVV-AAGRSDGWAIQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTGIDDLVAAVHGAFNELDWRILDKTFVTLVRVMEESMKMGGDNSYKLPHQSKDKMARLGPTAPSV 281
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: UPI001C256EBA (uncharacterized protein LOC121779336 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C256EBA) HSP 1 Score: 95.9 bits (237), Expect = 3.050e-18 Identity = 66/250 (26.40%), Postives = 116/250 (46.40%), Query Frame = 1
Query: 34 DRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRPD--PSRD--FNGKIETWRVFVKQ--AQRNSAQRKRGQQDEFDV-TIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDREAFGVAVEW 762
DR + PDEE + K I +VMF+C + RP P+ + F+GK+ + F + AQRNS R RG + + + +EW + IPA+ P +E+ QQ A H+ P + + G+ + LI QP SPD + D FF ++ S ++ + + ++ Y TL KV +L +++L+ GN++++ H+ + R G LP ++++ +E+
Sbjct: 182 DRYYLLPDEEE-PQRSCRSKRFITKVMFLCAVGRPHFGPNGETLFDGKLGIF-PFTEMVPAQRNSKNRPRGTLETKPIPAVTQAVTREWLINKIIPAIHSKWPTSASKEIYIQQDNAKPHISTTDP-EFEEAANSNGFKIQLICQPPNSPDTNILDLGFFRAIQSLKDKKACSNVDELLQNVSMAYEELTPQTLNKVFLTLQSVLSEILEVQGGNNYKIPHMNKDRLERIGALPNVLEVEERVVRDVLEY 428
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.530e-18 Identity = 64/232 (27.59%), Postives = 106/232 (45.69%), Query Frame = 1
Query: 58 EERMGSTKVQHKSHIPRVMFICVISRP--DPSRD--FNGKIETWRVF-VKQAQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDRE 738
+E + KVQ K HI +VMF+C ++RP D R ++GKI W + K A R S R RG +T+ Y+ D IPA++ P G + QQ A H+ D + R GWN+ L+ QPA SP+ + D FF ++ S + I D + + Y++ + +K +L K + K N +++ H++ + ++G + D +
Sbjct: 124 DEPIPQRKVQSKRHITKVMFLCAVARPRFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHVAVDDAEVV-AASRKNGWNIQLVAQPAMSPNFNVLDLGFFNAIQSLQHQTAMRTIDDLIASVQDAYSSLASQVWDKTFMTLQKVMEEAFKLEGDNIYKLPHLKKDLQLKSGTVALRPPCDED 354
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: UPI001C2701CF (uncharacterized protein LOC121760366 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2701CF) HSP 1 Score: 95.1 bits (235), Expect = 5.650e-18 Identity = 67/249 (26.91%), Postives = 114/249 (45.78%), Query Frame = 1
Query: 34 DRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRP----DPSRDFNGKIETWRVF-VKQAQRNSAQRKRGQQDEFDV-TIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDREAFGVAVEW 762
DR + PDE+ + K I +VMF+C +SRP D ++GK+ + V QR S R RG + V ++ E ++ + IPA+K P +++ QQ AT H+ P + + +G+ + LI QPA SPD + D FF ++ S + + + + V S + TL +V SL ++L+ GN ++V HI + R LP ++++ ++W
Sbjct: 183 DRYYLLPDEDEPYRA-CKSKRFITKVMFMCAVSRPHFGMDGQPTYDGKVGIFPFTEVMPTQRRSKNRPRGTMETKAVHSVTKEVMRDCLINKIIPAIKARWPVWASKDIYIQQDNATPHITAMDP-EFQAVANSDGFRIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSYFAELSPQTLNRVFLSLQACLTEILRCRGGNGYKVPHINKDRLQRTVGLPNQLEVEEGVVREVLQW 429
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25) HSP 1 Score: 94.4 bits (233), Expect = 8.140e-18 Identity = 70/242 (28.93%), Postives = 117/242 (48.35%), Query Frame = 1
Query: 34 DRVRMFPDEERMGSTKVQHKSHIPRVMFICVISRP----DPSRDFNGKIETWRVF-VKQAQRNSAQRKRGQQDEFDV-TIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEG-AKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDRE 738
DR + PDE+ + + K +I +VMF+C +SRP + ++GK+ + V AQR S R RG + + ++ ++ IPA+K P +++ QQ AT H+ P + + + +G+++ LI QP SPD + D FF ++ S + E+ VD + G S + TL KV SL ++L GN ++V HI + HR G LP +++D +
Sbjct: 146 DRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGASKDIYIQQDNATPHITAMDP-EFQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQS-LQHEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEILHCRGGNGYKVPHINKDRLHRNGGLPNVLEVDED 384
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A397CBJ2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CBJ2_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 9.020e-18 Identity = 66/239 (27.62%), Postives = 113/239 (47.28%), Query Frame = 1
Query: 61 ERMGSTKVQHKSHIPRVMFICVISRP--DPSRD--FNGKIETWRVF-VKQAQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDREAFGVAVEW 762
E++ + K H+ +V+F+ ++RP D ++ F+GKI TW V AQR S +R G VT+ + Y+ D IPA++ P E + V QQ A H+ + + + GW++ ++ QP SPDL + D FF ++ + + I D V + + A TL K +L + +V+ GND+++ H++ G LP+ V +R A+ V +
Sbjct: 192 EKIKQRSCKSKRHLLKVIFLSAVARPRWDQAKGEWFDGKIGTWHFTEVVPAQRRSCRRDAGTPAMKTVTVTRDTYKAMIIDNVIPAIRSKWPSDETKRVKIQQDNARPHV-PPSDAAIVAACKAMGWDMEVVFQPPNSPDLNVLDLGFFRAIQTLQVEKHSSSIEDIVAATDAAWAAVSTTTLNKNFLTLQRCLQEVILDTGGNDYKIPHMKKDVLLARGRLPEMVSCERNAWRVGCAY 429
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Match: A0A6A5ABP8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABP8_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.000e-17 Identity = 72/244 (29.51%), Postives = 110/244 (45.08%), Query Frame = 1
Query: 37 RVRMFPDEERMGSTKVQHKSHIPRVMFICVISRP----DPSRDFNGKIETWRVFVKQ--AQRNSAQRKRGQQDEFDVTIDAEWYQEWYKDYFIPALKQNMP*LEGEEVVAQQAGATSHMGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWRERYGMIVDPVEGAKSMYNACDAVTLEKVLQSLFKRYNQVLKAPEGNDFEVHHIETKKRHRAGNLPKSVKIDREAFGV 750
R ++ DE+ + K K HI +VMF+ ++RP ++GKI W FV + AQR S R RG +T+ Y+++ + I +KQ P V QQ A H+ D ++ G GW V L+ QPA SPD + D FF S+ + R+ I D V + ++ D TL+K +L K + LK N +++ H+ K R G L + D + G
Sbjct: 5 RYYLWHDED-LPVRKCSSKRHIIKVMFLTAVARPCYDHGSKTMWDGKIGMW-PFVSEVPAQRKSKNRPRGTMVTAPITVTKPVYRDFLVNKVILRIKQVWPGRRDVPVFIQQDNARPHVQVDD-LEVATAGTIGGWRVQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTCIDDLVAAVHAAFDELDFRTLDKTFMTLQKVMEESLKVGGDNTYKLPHLHKDKLARQGLLTSQLACDPDVAGA 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13284.2053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13284.2053.1 >prot_H-paniculata_contig13284.2053.1 ID=prot_H-paniculata_contig13284.2053.1|Name=mRNA_H-paniculata_contig13284.2053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp MGKDTPRKLNKLGRDEGWNVNLITQPAQSPDLYMNDFRFFASLNSRIWREback to top mRNA from alignment at H-paniculata_contig13284:1159..4335+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13284.2053.1 ID=mRNA_H-paniculata_contig13284.2053.1|Name=mRNA_H-paniculata_contig13284.2053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3177bp|location=Sequence derived from alignment at H-paniculata_contig13284:1159..4335+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13284:1159..4335+ >mRNA_H-paniculata_contig13284.2053.1 ID=mRNA_H-paniculata_contig13284.2053.1|Name=mRNA_H-paniculata_contig13284.2053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at H-paniculata_contig13284:1159..4335+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |