prot_H-paniculata_contig13259.2036.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13259.2036.1
Unique Nameprot_H-paniculata_contig13259.2036.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length138
Homology
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.130e-70
Identity = 102/128 (79.69%), Postives = 111/128 (86.72%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAE 128
            +ILATAGYDH I+FWEPP+G+C  TLRF DSQVN LKI+PDKQYLAAAGNPHVR+FEINS  ++AL SYD H TNVTDVGFQKD KWMYTGSEDG IKIWDLR  SCQRNY VG+ V TVALHPNQAE
Sbjct:    4 VILATAGYDHKIHFWEPPSGECRSTLRFSDSQVNSLKITPDKQYLAAAGNPHVRLFEINSQTASALRSYDGHATNVTDVGFQKDAKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVTTVALHPNQAE 131          
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA)

HSP 1 Score: 218 bits (556), Expect = 7.380e-69
Identity = 98/131 (74.81%), Postives = 112/131 (85.50%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTS 131
            +ILATAGYDH + FWEPP+G C+RTLR+ DSQVNCL+I+PDKQ+LAAAGNPHVR+FEI S +   +V+YD HTTNVTDVGFQKDGKWM+TGSEDG+IKIWDLR   CQRNY   A VN VALHPNQAEL S
Sbjct:    4 VILATAGYDHKVNFWEPPSGVCSRTLRYSDSQVNCLRITPDKQFLAAAGNPHVRLFEIASQNPNPVVAYDGHTTNVTDVGFQKDGKWMFTGSEDGSIKIWDLRAPGCQRNYEAKAPVNAVALHPNQAELIS 134          
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A8K1C2K7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2K7_PYTOL)

HSP 1 Score: 209 bits (531), Expect = 4.890e-65
Identity = 90/138 (65.22%), Postives = 113/138 (81.88%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 138
            ++LATAGYDH I FWE  +G CNRT+++ DSQVNCL+I+PDK+Y+AAAGNPH+R+FEINS +   + SYD HT+NVT +GFQK GKWMY+ S+DGTIKIWDLR   CQRNY +GA +N+V LHPNQAEL  GD +G +
Sbjct:    4 VVLATAGYDHTIRFWEAASGTCNRTVKYADSQVNCLQITPDKKYIAAAGNPHIRLFEINSNNPNHITSYDGHTSNVTSLGFQKHGKWMYSCSDDGTIKIWDLRAPGCQRNYDLGAPLNSVVLHPNQAELVVGDQNGCV 141          
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A6G0XEV7_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEV7_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.450e-63
Identity = 90/133 (67.67%), Postives = 107/133 (80.45%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGD 133
            ++LATAGYDH I FWE  +G C RT+++ DSQVNCL+++PDK+Y+ AAGNPHVR+FEINS +   + SYD HT NVT +GFQK GKWM+TGSEDGTIKIWDLR Q CQRNY   A VN+V LHPNQAEL S D
Sbjct:    4 VVLATAGYDHTIRFWEASSGTCTRTVKYPDSQVNCLQVTPDKKYIVAAGNPHVRLFEINSNNPNPVRSYDGHTGNVTSMGFQKHGKWMFTGSEDGTIKIWDLRAQGCQRNYECSAPVNSVTLHPNQAELISAD 136          
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A024UQ23_9STRA (Target of rapamycin complex subunit LST8 n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQ23_9STRA)

HSP 1 Score: 201 bits (510), Expect = 7.950e-62
Identity = 87/129 (67.44%), Postives = 105/129 (81.40%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAEL 129
            ++LA+AGYDH I FWE  TG C RT+++ DSQVNCL+I+PDK+Y+ AAGNPH+R+FEINS +   + SYD H+ NVT +GFQK GKWMY+GSEDGTIKIWDLR Q CQRNY   A VN+V LHPNQAEL
Sbjct:    4 VVLASAGYDHTIRFWEAATGTCTRTVKYPDSQVNCLQITPDKKYIVAAGNPHIRLFEINSNNPNPVRSYDGHSGNVTSIGFQKHGKWMYSGSEDGTIKIWDLRAQGCQRNYECSAPVNSVTLHPNQAEL 132          
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: I3SKI9_MEDTR (Uncharacterized protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=I3SKI9_MEDTR)

HSP 1 Score: 195 bits (495), Expect = 2.480e-61
Identity = 87/138 (63.04%), Postives = 106/138 (76.81%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 138
            ++LATA YDH I FWE  +G C RT+++ DSQVN L+I+PDK+YLAAAGNPH+R+F++NS     ++SYD HT+NV  VGFQ DG WMY+GSEDGT+KIWDLR   CQR Y   A VNTV LHPNQ EL SGD +G I
Sbjct:   21 VLLATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRLFDVNSNSPQPVMSYDGHTSNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRAAVNTVVLHPNQTELISGDQNGNI 158          
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: D0NME7_PHYIT (Target of rapamycin complex subunit LST8 n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0NME7_PHYIT)

HSP 1 Score: 201 bits (510), Expect = 2.630e-61
Identity = 84/138 (60.87%), Postives = 111/138 (80.43%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 138
            ++LATAGYDH I FWE  +G CNRT+++ DSQVNCL+I+PDK+Y+AAAGNPH+R+FEINS +   + SYD H++NVT +GFQ+ GKWMY+ S+DG++KIWDLR   CQR+Y  G  +N+V LHPNQAEL  GD +G +
Sbjct:    4 VVLATAGYDHTIRFWEAASGTCNRTVKYPDSQVNCLQITPDKKYIAAAGNPHIRLFEINSNNPNHVTSYDGHSSNVTSLGFQRHGKWMYSCSDDGSVKIWDLRAPGCQRSYAAGVPLNSVVLHPNQAELLVGDQNGAV 141          
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A5D6YF95_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YF95_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.040e-61
Identity = 85/138 (61.59%), Postives = 110/138 (79.71%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 138
            ++LATAGYDH+I FWE  +G CNRT++F DSQVNCL+I+PDK+++AAAG+PH+R+FEINS +   + S+D HT NVT VGFQ+  KW+Y+ S+DGT+KIWDLR   CQRNY  G  +N VALHPNQAEL  GD +G +
Sbjct:    4 VVLATAGYDHSIRFWEAASGTCNRTVKFADSQVNCLQIAPDKRFIAAAGHPHIRLFEINSNNPNHVTSFDGHTGNVTGVGFQRHSKWIYSCSDDGTVKIWDLRAPGCQRNYDAGVPLNAVALHPNQAELLVGDQNGAV 141          
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A2D4BTR3_PYTIN (Target of rapamycin complex subunit LST8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTR3_PYTIN)

HSP 1 Score: 197 bits (501), Expect = 1.530e-60
Identity = 84/138 (60.87%), Postives = 110/138 (79.71%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 138
            ++LATAGYDH I FW+  +G CNRT+++ DSQVNCL+I+PDK+++AAAGNPH+R+FEINS +   + SYD H+ NV  +GFQ+ GKWMY+ SEDGT+KIWDLR  +CQRNY  G  +N+V LHPNQAEL  GD +G +
Sbjct:    4 VVLATAGYDHTIRFWDAASGTCNRTVKYADSQVNCLQITPDKKHIAAAGNPHIRLFEINSNNPNHVFSYDGHSGNVMSLGFQRHGKWMYSCSEDGTLKIWDLRAPNCQRNYDCGVPLNSVVLHPNQAELIVGDQNGGV 141          
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: UPI0009BFE643 (protein LST8 homolog isoform X2 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009BFE643)

HSP 1 Score: 195 bits (495), Expect = 2.600e-60
Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = 0
Query:    1 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAEL 129
            +ILATAGYDH I FWE  +G C RTL++ DSQVN L+I+PDKQYLAAAGNPH+R+FE+NS  S  ++SYD+HT NV  VGFQ DG WMY+GSEDGT+KIWDLR   CQR Y   A VNTV LHPNQ EL
Sbjct:    6 VILATAGYDHTIRFWEAKSGRCYRTLQYPDSQVNRLEITPDKQYLAAAGNPHIRLFEVNSNSSQPVISYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRAAVNTVVLHPNQTEL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL41_ECTSI1.130e-7079.69WD40 repeat containing protein n=1 Tax=Ectocarpus ... [more]
A0A836C989_9STRA7.380e-6974.81WD40 repeat-containing protein n=1 Tax=Tribonema m... [more]
A0A8K1C2K7_PYTOL4.890e-6565.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XEV7_9STRA2.450e-6367.67Target of rapamycin complex subunit LST8 n=1 Tax=A... [more]
A0A024UQ23_9STRA7.950e-6267.44Target of rapamycin complex subunit LST8 n=3 Tax=A... [more]
I3SKI9_MEDTR2.480e-6163.04Uncharacterized protein n=1 Tax=Medicago truncatul... [more]
D0NME7_PHYIT2.630e-6160.87Target of rapamycin complex subunit LST8 n=20 Tax=... [more]
A0A5D6YF95_9STRA4.040e-6161.59Target of rapamycin complex subunit LST8 n=1 Tax=P... [more]
A0A2D4BTR3_PYTIN1.530e-6060.87Target of rapamycin complex subunit LST8 n=1 Tax=P... [more]
UPI0009BFE6432.600e-6068.22protein LST8 homolog isoform X2 n=1 Tax=Amborella ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 62..101
e-value: 4.6E-8
score: 42.8
coord: 19..57
e-value: 0.13
score: 21.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 21..56
e-value: 1.6E-4
score: 22.4
coord: 67..101
e-value: 2.0E-9
score: 37.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 69..110
score: 16.624
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..138
e-value: 1.6E-45
score: 157.4
IPR037588Target of rapamycin complex subunit LST8PANTHERPTHR19842G BETA-LIKE PROTEIN GBLcoord: 2..138
NoneNo IPR availablePANTHERPTHR19842:SF0TARGET OF RAPAMYCIN COMPLEX SUBUNIT LST8coord: 2..138
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 88..102
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..110
score: 22.148
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13259contigH-paniculata_contig13259:3564..5082 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13259.2036.1mRNA_H-paniculata_contig13259.2036.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13259 3561..5082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13259.2036.1 ID=prot_H-paniculata_contig13259.2036.1|Name=mRNA_H-paniculata_contig13259.2036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGN
PHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIW
DLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037588MLST8
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf