mRNA_H-paniculata_contig13259.2036.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13259.2036.1
Unique NamemRNA_H-paniculata_contig13259.2036.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 1.660e-70
Identity = 102/128 (79.69%), Postives = 111/128 (86.72%), Query Frame = 1 
Query:    4 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAE 387
            +ILATAGYDH I+FWEPP+G+C  TLRF DSQVN LKI+PDKQYLAAAGNPHVR+FEINS  ++AL SYD H TNVTDVGFQKD KWMYTGSEDG IKIWDLR  SCQRNY VG+ V TVALHPNQAE
Sbjct:    4 VILATAGYDHKIHFWEPPSGECRSTLRFSDSQVNSLKITPDKQYLAAAGNPHVRLFEINSQTASALRSYDGHATNVTDVGFQKDAKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVTTVALHPNQAE 131
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA)

HSP 1 Score: 218 bits (556), Expect = 7.690e-69
Identity = 98/132 (74.24%), Postives = 113/132 (85.61%), Query Frame = 1 
Query:    1 AMILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTS 396
            ++ILATAGYDH + FWEPP+G C+RTLR+ DSQVNCL+I+PDKQ+LAAAGNPHVR+FEI S +   +V+YD HTTNVTDVGFQKDGKWM+TGSEDG+IKIWDLR   CQRNY   A VN VALHPNQAEL S
Sbjct:    3 SVILATAGYDHKVNFWEPPSGVCSRTLRYSDSQVNCLRITPDKQFLAAAGNPHVRLFEIASQNPNPVVAYDGHTTNVTDVGFQKDGKWMFTGSEDGSIKIWDLRAPGCQRNYEAKAPVNAVALHPNQAELIS 134
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A8K1C2K7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2K7_PYTOL)

HSP 1 Score: 208 bits (530), Expect = 7.210e-65
Identity = 90/138 (65.22%), Postives = 113/138 (81.88%), Query Frame = 1 
Query:    4 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 417
            ++LATAGYDH I FWE  +G CNRT+++ DSQVNCL+I+PDK+Y+AAAGNPH+R+FEINS +   + SYD HT+NVT +GFQK GKWMY+ S+DGTIKIWDLR   CQRNY +GA +N+V LHPNQAEL  GD +G +
Sbjct:    4 VVLATAGYDHTIRFWEAASGTCNRTVKYADSQVNCLQITPDKKYIAAAGNPHIRLFEINSNNPNHITSYDGHTSNVTSLGFQKHGKWMYSCSDDGTIKIWDLRAPGCQRNYDLGAPLNSVVLHPNQAELVVGDQNGCV 141
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A6G0XEV7_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEV7_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.620e-63
Identity = 90/133 (67.67%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:    4 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGD 402
            ++LATAGYDH I FWE  +G C RT+++ DSQVNCL+++PDK+Y+ AAGNPHVR+FEINS +   + SYD HT NVT +GFQK GKWM+TGSEDGTIKIWDLR Q CQRNY   A VN+V LHPNQAEL S D
Sbjct:    4 VVLATAGYDHTIRFWEASSGTCTRTVKYPDSQVNCLQVTPDKKYIVAAGNPHVRLFEINSNNPNPVRSYDGHTGNVTSMGFQKHGKWMFTGSEDGTIKIWDLRAQGCQRNYECSAPVNSVTLHPNQAELISAD 136
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A024UQ23_9STRA (Target of rapamycin complex subunit LST8 n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQ23_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.170e-61
Identity = 87/129 (67.44%), Postives = 105/129 (81.40%), Query Frame = 1 
Query:    4 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAEL 390
            ++LA+AGYDH I FWE  TG C RT+++ DSQVNCL+I+PDK+Y+ AAGNPH+R+FEINS +   + SYD H+ NVT +GFQK GKWMY+GSEDGTIKIWDLR Q CQRNY   A VN+V LHPNQAEL
Sbjct:    4 VVLASAGYDHTIRFWEAATGTCTRTVKYPDSQVNCLQITPDKKYIVAAGNPHIRLFEINSNNPNPVRSYDGHSGNVTSIGFQKHGKWMYSGSEDGTIKIWDLRAQGCQRNYECSAPVNSVTLHPNQAEL 132
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: I3SKI9_MEDTR (Uncharacterized protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=I3SKI9_MEDTR)

HSP 1 Score: 195 bits (495), Expect = 2.580e-61
Identity = 87/139 (62.59%), Postives = 107/139 (76.98%), Query Frame = 1 
Query:    1 AMILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 417
            +++LATA YDH I FWE  +G C RT+++ DSQVN L+I+PDK+YLAAAGNPH+R+F++NS     ++SYD HT+NV  VGFQ DG WMY+GSEDGT+KIWDLR   CQR Y   A VNTV LHPNQ EL SGD +G I
Sbjct:   20 SVLLATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRLFDVNSNSPQPVMSYDGHTSNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRAAVNTVVLHPNQTELISGDQNGNI 158
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: D0NME7_PHYIT (Target of rapamycin complex subunit LST8 n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0NME7_PHYIT)

HSP 1 Score: 200 bits (509), Expect = 3.880e-61
Identity = 84/138 (60.87%), Postives = 111/138 (80.43%), Query Frame = 1 
Query:    4 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 417
            ++LATAGYDH I FWE  +G CNRT+++ DSQVNCL+I+PDK+Y+AAAGNPH+R+FEINS +   + SYD H++NVT +GFQ+ GKWMY+ S+DG++KIWDLR   CQR+Y  G  +N+V LHPNQAEL  GD +G +
Sbjct:    4 VVLATAGYDHTIRFWEAASGTCNRTVKYPDSQVNCLQITPDKKYIAAAGNPHIRLFEINSNNPNHVTSYDGHSSNVTSLGFQRHGKWMYSCSDDGSVKIWDLRAPGCQRSYAAGVPLNSVVLHPNQAELLVGDQNGAV 141
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A2D4BTR3_PYTIN (Target of rapamycin complex subunit LST8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTR3_PYTIN)

HSP 1 Score: 198 bits (504), Expect = 5.620e-61
Identity = 85/139 (61.15%), Postives = 111/139 (79.86%), Query Frame = 1 
Query:    1 AMILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 417
            A++LATAGYDH I FW+  +G CNRT+++ DSQVNCL+I+PDK+++AAAGNPH+R+FEINS +   + SYD H+ NV  +GFQ+ GKWMY+ SEDGT+KIWDLR  +CQRNY  G  +N+V LHPNQAEL  GD +G +
Sbjct:    3 AVVLATAGYDHTIRFWDAASGTCNRTVKYADSQVNCLQITPDKKHIAAAGNPHIRLFEINSNNPNHVFSYDGHSGNVMSLGFQRHGKWMYSCSEDGTLKIWDLRAPNCQRNYDCGVPLNSVVLHPNQAELIVGDQNGGV 141
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: A0A5D6YF95_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YF95_9STRA)

HSP 1 Score: 198 bits (504), Expect = 5.950e-61
Identity = 85/138 (61.59%), Postives = 110/138 (79.71%), Query Frame = 1 
Query:    4 MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI 417
            ++LATAGYDH+I FWE  +G CNRT++F DSQVNCL+I+PDK+++AAAG+PH+R+FEINS +   + S+D HT NVT VGFQ+  KW+Y+ S+DGT+KIWDLR   CQRNY  G  +N VALHPNQAEL  GD +G +
Sbjct:    4 VVLATAGYDHSIRFWEAASGTCNRTVKFADSQVNCLQIAPDKRFIAAAGHPHIRLFEINSNNPNHVTSFDGHTGNVTGVGFQRHSKWIYSCSDDGTVKIWDLRAPGCQRNYDAGVPLNAVALHPNQAELLVGDQNGAV 141
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BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Match: UPI0009BFE643 (protein LST8 homolog isoform X2 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009BFE643)

HSP 1 Score: 195 bits (495), Expect = 2.700e-60
Identity = 88/130 (67.69%), Postives = 103/130 (79.23%), Query Frame = 1 
Query:    1 AMILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGNPHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIWDLRTQSCQRNYVVGAGVNTVALHPNQAEL 390
            ++ILATAGYDH I FWE  +G C RTL++ DSQVN L+I+PDKQYLAAAGNPH+R+FE+NS  S  ++SYD+HT NV  VGFQ DG WMY+GSEDGT+KIWDLR   CQR Y   A VNTV LHPNQ EL
Sbjct:    5 SVILATAGYDHTIRFWEAKSGRCYRTLQYPDSQVNRLEITPDKQYLAAAGNPHIRLFEVNSNSSQPVISYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRAAVNTVVLHPNQTEL 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13259.2036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL41_ECTSI1.660e-7079.69WD40 repeat containing protein n=1 Tax=Ectocarpus ... [more]
A0A836C989_9STRA7.690e-6974.24WD40 repeat-containing protein n=1 Tax=Tribonema m... [more]
A0A8K1C2K7_PYTOL7.210e-6565.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XEV7_9STRA3.620e-6367.67Target of rapamycin complex subunit LST8 n=1 Tax=A... [more]
A0A024UQ23_9STRA1.170e-6167.44Target of rapamycin complex subunit LST8 n=3 Tax=A... [more]
I3SKI9_MEDTR2.580e-6162.59Uncharacterized protein n=1 Tax=Medicago truncatul... [more]
D0NME7_PHYIT3.880e-6160.87Target of rapamycin complex subunit LST8 n=20 Tax=... [more]
A0A2D4BTR3_PYTIN5.620e-6161.15Target of rapamycin complex subunit LST8 n=1 Tax=P... [more]
A0A5D6YF95_9STRA5.950e-6161.59Target of rapamycin complex subunit LST8 n=1 Tax=P... [more]
UPI0009BFE6432.700e-6067.69protein LST8 homolog isoform X2 n=1 Tax=Amborella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13259contigH-paniculata_contig13259:3561..5082 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.5
Seed ortholog evalue2.5e-55
Seed eggNOG ortholog2880.D7FL41
Preferred nameMLST8
KEGG koko:K08266
KEGG Pathwayko04136,ko04138,ko04140,ko04150,ko04151,ko04714,map04136,map04138,map04140,map04150,map04151,map04714
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0001558,GO:0001932,GO:0001934,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005773,GO:0005776,GO:0005794,GO:0005829,GO:0005886,GO:0006355,GO:0006935,GO:0006950,GO:0006996,GO:0007010,GO:0007049,GO:0007050,GO:0007154,GO:0007163,GO:0007165,GO:0007190,GO:0007492,GO:0007498,GO:0008047,GO:0008064,GO:0008104,GO:0008150,GO:0008361,GO:0009267,GO:0009605,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009898,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010008,GO:0010468,GO:0010506,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0012505,GO:0016020,GO:0016043,GO:0016241,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019887,GO:0019897,GO:0019898,GO:0022402,GO:0023051,GO:0023052,GO:0023056,GO:0030029,GO:0030036,GO:0030100,GO:0030234,GO:0030295,GO:0030587,GO:0030832,GO:0030833,GO:0030838,GO:0030950,GO:0030952,GO:0031090,GO:0031152,GO:0031234,GO:0031252,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031334,GO:0031399,GO:0031401,GO:0031410,GO:0031505,GO:0031667,GO:0031668,GO:0031669,GO:0031929,GO:0031930,GO:0031931,GO:0031932,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032006,GO:0032008,GO:0032147,GO:0032148,GO:0032268,GO:0032270,GO:0032271,GO:0032273,GO:0032502,GO:0032535,GO:0032879,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0033674,GO:0034399,GO:0034504,GO:0034613,GO:0035556,GO:0038201,GO:0038202,GO:0038203,GO:0040008,GO:0040011,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042594,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043327,GO:0043519,GO:0043520,GO:0043539,GO:0043549,GO:0044087,GO:0044089,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044764,GO:0045229,GO:0045786,GO:0045793,GO:0045806,GO:0045859,GO:0045860,GO:0045893,GO:0045935,GO:0045937,GO:0046626,GO:0046628,GO:0048382,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048856,GO:0050730,GO:0050731,GO:0050764,GO:0050765,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051336,GO:0051338,GO:0051347,GO:0051493,GO:0051495,GO:0051641,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051896,GO:0051897,GO:0060255,GO:0060627,GO:0061586,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0071496,GO:0071554,GO:0071555,GO:0071840,GO:0071852,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090702,GO:0097708,GO:0098552,GO:0098562,GO:0098588,GO:0098630,GO:0098743,GO:0098772,GO:0098791,GO:0098805,GO:0099120,GO:0110053,GO:1900034,GO:1900076,GO:1900078,GO:1902531,GO:1902533,GO:1902680,GO:1902903,GO:1902905,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.TOR signaling
EggNOG OGsKOG0315@1,KOG0315@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons3
Model size417
Cds size414
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13259.2036.1prot_H-paniculata_contig13259.2036.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13259 3564..5082 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929049.2171195-UTR-H-paniculata_contig13259:3560..35631622929049.2171195-UTR-H-paniculata_contig13259:3560..3563Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13259 3561..3563 +
1691480712.036131-UTR-H-paniculata_contig13259:3560..35631691480712.036131-UTR-H-paniculata_contig13259:3560..3563Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13259 3561..3563 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929049.233524-CDS-H-paniculata_contig13259:3563..36591622929049.233524-CDS-H-paniculata_contig13259:3563..3659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13259 3564..3659 +
1691480712.0473611-CDS-H-paniculata_contig13259:3563..36591691480712.0473611-CDS-H-paniculata_contig13259:3563..3659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13259 3564..3659 +
1622929049.2511685-CDS-H-paniculata_contig13259:4509..46511622929049.2511685-CDS-H-paniculata_contig13259:4509..4651Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13259 4510..4651 +
1691480712.0600142-CDS-H-paniculata_contig13259:4509..46511691480712.0600142-CDS-H-paniculata_contig13259:4509..4651Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13259 4510..4651 +
1622929049.2661777-CDS-H-paniculata_contig13259:4906..50821622929049.2661777-CDS-H-paniculata_contig13259:4906..5082Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13259 4907..5082 +
1691480712.0696507-CDS-H-paniculata_contig13259:4906..50821691480712.0696507-CDS-H-paniculata_contig13259:4906..5082Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13259 4907..5082 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13259.2036.1

>prot_H-paniculata_contig13259.2036.1 ID=prot_H-paniculata_contig13259.2036.1|Name=mRNA_H-paniculata_contig13259.2036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MILATAGYDHNIYFWEPPTGDCNRTLRFVDSQVNCLKISPDKQYLAAAGN
PHVRVFEINSAHSTALVSYDAHTTNVTDVGFQKDGKWMYTGSEDGTIKIW
DLRTQSCQRNYVVGAGVNTVALHPNQAELTSGDVDGKI
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mRNA from alignment at H-paniculata_contig13259:3561..5082+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13259.2036.1 ID=mRNA_H-paniculata_contig13259.2036.1|Name=mRNA_H-paniculata_contig13259.2036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1522bp|location=Sequence derived from alignment at H-paniculata_contig13259:3561..5082+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCATGATACTGGCAACGGCCGGCTACGACCATAACATATACTTCTGGGA
ACCGCCCACCGGTGATTGTAATCGCACGCTCCGCTTCGTCGACAGTCAGG
TAACTACGTGATTTGCGAGATTTCCGTCTTGTGACGTCCAAATATGAACA
CTCTGGCCTCCGAATTACGGCGAGTTGGGTTCAGGGACCACAGCGGCTGC
GTCCAGTCTATGTATTCCTTTGTGAGAAATTCGTGCGCGCGTATCGGAAA
AAAGGAACGACTGGCCGAACGTAGTACTGCCAAGTGAAAAATTGCGATCC
CCGAACGAGCCAGACGTTGACGCAGCAGTTTTTCGAGTGTTGACAAAACG
TTCAGCGTCGGAGTAGGCTATTTCGGAACAGAAAAAGGCGTCTGACAAAA
AGATGTAGACCGCTGCAGTCGTTGTGAGTAGAATGATTCCAACTCGCTGT
TCCTGTACCACCCCGTAGGCGTCATTTCCTGTGCTTAGAGGCAGGAATTA
AATAGTGATTAGATAGATAAGAATTGGCGTTAAAACGATTAACTGATCGT
TGGTTCCATTTCTGGTCGGACTAGGGCACACCTCCGGGTGTAAAGGATGG
CGTGACTTGGTCGCTTACACTGAACAGCTACTGCATAAATGGGTATCGTC
GAGAGTGGCACTTGCCTCGCTTTGGACGGCATGCGCTTTCTGTATGTTTA
CTGCAGCTCAAACCTGACATTTCAGCATTTCCTGCGTACGTAGCTACTGC
GTCTCCTGTGGGCCTAGACTTGCGAAATTATGCTCATCGCATTCGGCCTA
GTATATCCTCCGCGCTGTTCCAGCCACCCTGGCGTACATATATCATGAGA
TCATTGATTCGTTGTCCACGTGGTAGTTCATTTTGGTAGTATCCGTGACG
ACCCCAAGAACACAAGCTCCGAAACACCCATGCGTTCGAACAAATGAAGG
TGAACTGTCTCAAGATCTCGCCGGACAAGCAATATCTGGCCGCCGCGGGC
AACCCACACGTGCGAGTATTCGAGATCAACAGTGCCCACTCCACCGCTCT
GGTCTCTTACGACGCACATACCACGAACGTTACCGATGTCGGTGAGCACT
TCTACTCCTGTTTTCTCTCTTTCTCTCTCTCTCTCTCTGCTAACAGCGTA
TGTGTTTTTTCCGTTATTGTTCGTTACACGTACTATGTGCTGGCTGTCTT
GGGGCAGCACCAAACACACAACGAGCCTCAAGCTCTGTCTGTCTGCCTTT
GTCCCTCTCCCTCTCTTTGTCTCTGTTTTTTGTTTTTTCTGTTTTGCTGA
TCTCGGACGGCGCGTTATTATACCTATACAACCACCACAAAAAAAGGGTT
CCAGAAAGACGGGAAGTGGATGTACACAGGGTCGGAGGATGGGACAATTA
AGATCTGGGATCTCAGGACTCAGTCATGCCAACGGAATTATGTCGTAGGA
GCCGGAGTCAATACCGTTGCATTACATCCCAACCAGGCGGAGCTGACGTC
TGGTGACGTAGACGGCAAGATA
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Coding sequence (CDS) from alignment at H-paniculata_contig13259:3561..5082+

>mRNA_H-paniculata_contig13259.2036.1 ID=mRNA_H-paniculata_contig13259.2036.1|Name=mRNA_H-paniculata_contig13259.2036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig13259:3561..5082+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATACTGGCAACGGCCGGCTACGACCATAACATATACTTCTGGGAACC
GCCCACCGGTGATTGTAATCGCACGCTCCGCTTCGTCGACAGTCAGATGA
TACTGGCAACGGCCGGCTACGACCATAACATATACTTCTGGGAACCGCCC
ACCGGTGATTGTAATCGCACGCTCCGCTTCGTCGACAGTCAGGTGAACTG
TCTCAAGATCTCGCCGGACAAGCAATATCTGGCCGCCGCGGGCAACCCAC
ACGTGCGAGTATTCGAGATCAACAGTGCCCACTCCACCGCTCTGGTCTCT
TACGACGCACATACCACGAACGTTACCGATGTCGGTGAACTGTCTCAAGA
TCTCGCCGGACAAGCAATATCTGGCCGCCGCGGGCAACCCACACGTGCGA
GTATTCGAGATCAACAGTGCCCACTCCACCGCTCTGGTCTCTTACGACGC
ACATACCACGAACGTTACCGATGTCGGGTTCCAGAAAGACGGGAAGTGGA
TGTACACAGGGTCGGAGGATGGGACAATTAAGATCTGGGATCTCAGGACT
CAGTCATGCCAACGGAATTATGTCGTAGGAGCCGGAGTCAATACCGTTGC
ATTACATCCCAACCAGGCGGAGCTGACGTCTGGTGACGTAGACGGCAAGA
TAGGTTCCAGAAAGACGGGAAGTGGATGTACACAGGGTCGGAGGATGGGA
CAATTAAGATCTGGGATCTCAGGACTCAGTCATGCCAACGGAATTATGTC
GTAGGAGCCGGAGTCAATACCGTTGCATTACATCCCAACCAGGCGGAGCT
GACGTCTGGTGACGTAGACGGCAAGATA
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