prot_H-paniculata_contig13169.1982.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13169.1982.1
Unique Nameprot_H-paniculata_contig13169.1982.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length50
Homology
BLAST of mRNA_H-paniculata_contig13169.1982.1 vs. uniprot
Match: D7G9D8_ECTSI (MutL protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D8_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 7.010e-11
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 VVRGGETLHCGPSSTPLQQGTVVTLRDVFYRWPVRRKAMNPV 42
            VVR GE LH GPS  P++ GT+VTLRD F++WPVRRKA N V
Sbjct:  136 VVREGEVLHFGPSRAPVRAGTIVTLRDAFFKWPVRRKAANEV 177          
BLAST of mRNA_H-paniculata_contig13169.1982.1 vs. uniprot
Match: A0A6H5JWV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWV7_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.310e-10
Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 VVRGGETLHCGPSSTPLQQGTVVTLRDVFYRWPVRRKAMNPV 42
            VVR GE LH GPS  P + GT+VTLRD F++WPVRRKA N V
Sbjct:   87 VVREGEVLHFGPSRAPARAGTIVTLRDAFFKWPVRRKAANEV 128          
BLAST of mRNA_H-paniculata_contig13169.1982.1 vs. uniprot
Match: A0A1Y2EVX0_9BASI (Uncharacterized protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2EVX0_9BASI)

HSP 1 Score: 50.8 bits (120), Expect = 5.480e-6
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 VVRGGETLHCGPSSTP-LQQGTVVTLRDVFYRWPVRRKAMN 40
            V RGGE L+ G +STP   +GT V +RD+FY+WPVRRK ++
Sbjct:  141 VARGGERLYEGVASTPRATEGTTVWVRDIFYKWPVRRKPLS 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13169.1982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G9D8_ECTSI7.010e-1166.67MutL protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JWV7_9PHAE1.310e-1066.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y2EVX0_9BASI5.480e-656.10Uncharacterized protein n=1 Tax=Leucosporidium cre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 1..49
e-value: 1.2E-5
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13169contigH-paniculata_contig13169:6294..6443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13169.1982.1mRNA_H-paniculata_contig13169.1982.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13169 6294..6443 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13169.1982.1 ID=prot_H-paniculata_contig13169.1982.1|Name=mRNA_H-paniculata_contig13169.1982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=50bp
VVRGGETLHCGPSSTPLQQGTVVTLRDVFYRWPVRRKAMNPVRTVQCKRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036890HATPase_C_sf