mRNA_H-paniculata_contig12972.1865.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI) HSP 1 Score: 264 bits (674), Expect = 4.540e-78 Identity = 143/183 (78.14%), Postives = 154/183 (84.15%), Query Frame = 1 Query: 10 AMYWKVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLDVSRLQRADDREDDDIGAAGGISISNALEQSARSPLGMRPRWRKKNTPMVPVEELRKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTRARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVDLAFQDSRR 558 A+ KVVEARDRRSV+VTTPTSVKSFMLKLVEL+HKLD SRL+RA+ RED+ GAAGGI R LGMRP WR+ + PV+ELR+QAEIAVRVL VFR AALLLDEVDLILQPLKSELNWPLG KRPLDFTRARPGS LGNGLRWQ+PFHLLEAFFYYTEGRM VDLAFQDSRR Sbjct: 3032 AILEKVVEARDRRSVMVTTPTSVKSFMLKLVELLHKLDTSRLERAEIREDNS-GAAGGI----------RRALGMRPGWRRAPAKLEPVQELRRQAEIAVRVLTVFRGAALLLDEVDLILQPLKSELNWPLGVKRPLDFTRARPGSQLGNGLRWQVPFHLLEAFFYYTEGRMVVDLAFQDSRR 3203
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: A0A835Z7Z7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z7_9STRA) HSP 1 Score: 192 bits (487), Expect = 6.190e-53 Identity = 102/183 (55.74%), Postives = 134/183 (73.22%), Query Frame = 1 Query: 10 AMYWKVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLDVSRLQRADDREDDDIGAAGGISISNALEQSARSPLGMRPRWRKKNTPMVPVEELRKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTRARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVDLAFQDSRR 558 A+ K EA+ R+++VTTPTSVK+FMLK EL+ KL+ SRL + ++++DD +G S+ + + R LG R W + + +E+LR+QA IAV +L +F+ AL+LDEVDLIL PLKSELNWPLG KRPLD TRARPGS LG+GLRWQIPFHLL+A FY +EGR +D+AF+DSRR Sbjct: 3719 ALLSKAEEAQRARAIMVTTPTSVKAFMLKFAELLDKLEASRLYK-EEKDDDRLG-------SSDIARGIRRKLGWRKGWSARPEVLRDMEDLRRQAGIAVAILRIFKEGALILDEVDLILHPLKSELNWPLGRKRPLDMTRARPGSKLGDGLRWQIPFHLLDALFYCSEGRSVIDVAFRDSRR 3893
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: W7TMJ4_9STRA (EF-Hand 1, calcium-binding site n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMJ4_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.850e-40 Identity = 91/197 (46.19%), Postives = 121/197 (61.42%), Query Frame = 1 Query: 1 VVRAMYWKVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLDVSRLQRADDREDDDIGAAGGISISNALEQSARSPLGMRPRWRKKNTPMVPVEELRKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTRARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVDLAFQDSRRYIVVCAIVAEV 591 V +Y K+ AR+ RSVVVTTPT++KSF LK VE+ H LD + L ++ A G+S + + + + LRK+A + V+++D+FR ALLLDEVDLIL PLKSELNWP G KRPLDFTR+R G +GLRW+IPFHLL+A FY+TE +M V F+DSR +++ V EV Sbjct: 2416 VTEGLYRKLHHARETRSVVVTTPTAIKSFALKFVEICHILDGTSLPPEKTKKSG-FKALFGLSREDVKGRELSA---------------AAIGGLRKEARLCVQIIDLFRTGALLLDEVDLILHPLKSELNWPTGGKRPLDFTRSRDGHEKNDGLRWKIPFHLLDALFYFTENKMTVG--FRDSREAVMLLEKVKEV 2594
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: A0A7S1U8D0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8D0_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.870e-34 Identity = 85/194 (43.81%), Postives = 117/194 (60.31%), Query Frame = 1 Query: 22 KVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLD--VSRLQRADDREDDDIGAAGGISISNALEQSARSPLGMRPRWRKKNTPM--VPVEELRKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTRARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVDLAFQDSRRYIVVCAIVAEV 591 K+ A + R++VV TPTS+KSF LKLVE++H LD V+ +AD+ G IS AL Q+A LG+ R + + VE +++QA V++L +F+ L++DE+DL+L PLKSELNWPLG K PLDFTR S GNGLRW +PFHLL+ FY EG ++ +SR V +A+V Sbjct: 245 KLRRASESRAIVVATPTSIKSFQLKLVEIIHALDANVAAGAKADE---------GTRGISKALRQAA-GYLGLSRRGSISDLILEEAQVENMKQQANTIVQILAIFKAGTLIVDEIDLVLHPLKSELNWPLGVKEPLDFTR----SESGNGLRWDLPFHLLDGVFYAAEGPQSLTTEITESRESRTVLEEIAKV 424
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: A0A7R9UG66_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG66_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.330e-33 Identity = 79/180 (43.89%), Postives = 109/180 (60.56%), Query Frame = 1 Query: 22 KVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLDVSRLQRADDREDDDIGAAGGISISNALEQSARSPLGMRPRWRKKNTPMVP--VEELRKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTRARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVDLAFQDSR 555 K+ A + R++VV+ PTS+KSF LKL+E++H LD + +GA IS+AL+ +A G+R + VE+L++QA V++L +F+ A L+LDEVDL+L PLKSELNWPLG K LDFTR S+ G GLRW +PFHLL+ FY EG ++ DSR Sbjct: 2554 KLRRAAESRAIVVSNPTSIKSFQLKLIEIIHALDANVAAGGQ------LGAIDSKGISDALKSAAAGFFGLRREGSMSELILQEDEVEKLKQQAITIVQILKIFKSATLILDEVDLLLHPLKSELNWPLGVKEALDFTR----SSSGTGLRWDLPFHLLDGIFYAAEGIRSLTTEVTDSR 2723
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: A0A7S4EGX6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EGX6_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.090e-32 Identity = 79/197 (40.10%), Postives = 120/197 (60.91%), Query Frame = 1 Query: 1 VVRAMYWKVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLDVSRLQRADDREDDDIGAAGGISISNALEQSARSPLGMRPRWRKKNTPMVPVEELRKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTRARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVDLAFQDSRRYIVVCAIVAEV 591 + + +Y K+ +ARD R+V+ TPTS+KSFMLK VE++ L+ ++ R R+ + G G S+S A+ + R + +V + + +L +FR LLLDEVDLIL PLKSELNWP+G K P+D++R++ LG GLRW I +H+L+A FYYTE +M+V AF+DSR + + +++V Sbjct: 472 ITKDLYLKLCKARDSRAVICATPTSIKSFMLKFVEMMKVLEETKFGRGGTRQPANNGVFGNFSLS-AIARRFRD-----------QSEIVQAQVNPEDVFYCTEILKLFRSGVLLLDEVDLILHPLKSELNWPIGLKDPIDYSRSK----LGIGLRWDIQWHILDAVFYYTERKMSV--AFKDSREALSILESMSQV 650
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: A0A7S4AD69_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AD69_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.130e-32 Identity = 79/197 (40.10%), Postives = 120/197 (60.91%), Query Frame = 1 Query: 1 VVRAMYWKVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLDVSRLQRADDREDDDIGAAGGISISNALEQSARSPLGMRPRWRKKNTPMVPVEELRKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTRARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVDLAFQDSRRYIVVCAIVAEV 591 + + +Y K+ +ARD R+V+ TPTS+KSFMLK VE++ L+ ++ R R+ + G G S+S A+ + R + +V + + +L +FR LLLDEVDLIL PLKSELNWP+G K P+D++R++ LG GLRW I +H+L+A FYYTE +M+V AF+DSR + + +++V Sbjct: 472 ITKDLYLKLCKARDSRAVICATPTSIKSFMLKFVEMMKVLEETKFGRGGTRQPANNGVFGNFSLS-AIARRFRD-----------QSEIVQAQVNPEDVFYCTEILKLFRSGVLLLDEVDLILHPLKSELNWPIGLKDPIDYSRSK----LGIGLRWDIQWHILDAVFYYTERKMSV--AFKDSREALSILESMSQV 650
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: A0A2R5FYY4_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY4_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.170e-32 Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 7 RAMYWKVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLDVSRLQRADDREDDDIGAAGGISISNALEQSARSPLGMRPRWRKKNTPMVPVEE---LRKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTRARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVD 534 R MY K++ AR R+VV TTPT++KSF LKLVE H LD ++ + DD S + ++ + L + + R+ M+ EE LR+Q ++ R+LD+FR L+LDEVDLIL PL+SELNWP+G K PLDFTR+ +G+RW IPFHLL+AFF T G+ +D Sbjct: 2847 RQMYRKLLIARKSRAVVCTTPTALKSFFLKLVEAAHLLDAAKYESEDDMR----------SAPSIIKSFFKETLSLTSKARE----MLTKEEATRLREQMRLSSRILDLFRDGVLILDEVDLILHPLRSELNWPIGNKVPLDFTRSHVKGH--DGMRWMIPFHLLDAFFARTAGQTTLD 3009
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: A0A2R5GI29_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI29_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.950e-32 Identity = 77/190 (40.53%), Postives = 116/190 (61.05%), Query Frame = 1 Query: 7 RAMYWKVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLDVSRLQRADDREDDDIGAAG--GISISNALEQSARSPLGMRPRWRKKNTPMVPVEELRKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTRARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVDLAFQDSRRYIVV 570 + +Y K+++A+ R VV++TPT++KSF LK VE V+ + + AD+++ ++ G G I+ + + + + +++L QA+ VR+L +FR +L+LDEVDLIL PLKSELNWP+G K PLDFTR G+ GLRW+IPFHLL+A + TE RM V F++SR V+ Sbjct: 3157 KTLYQKLLKAKAARGVVISTPTAIKSFTLKFVETVNAILTLKAAIADNKDTSEMSFFGVLGRRITTTIRGDRQQEMNQ-----------LMLQKLIVQAQTCVRILSLFRNGSLILDEVDLILHPLKSELNWPMGQKEPLDFTRTPTGAV--TGLRWRIPFHLLDAILFATERRMTVR--FENSREARVI 3331
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Match: A0A0G4EXY0_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXY0_VITBC) HSP 1 Score: 132 bits (331), Expect = 5.470e-32 Identity = 85/218 (38.99%), Postives = 128/218 (58.72%), Query Frame = 1 Query: 13 MYWKVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLD--VSRLQRADDREDDDIGAAGGISISNALEQ--SARSPLGMRPRWRKKNTPMVPVEEL-----RKQAEIAVRVLDVFRRAALLLDEVDLILQPLKSELNWPLGAKRPLDFTR--------------ARPGSTLGNGLRWQIPFHLLEAFFYYTEGRMAVDLAFQDSRRYIVVCAIVAEVAK 597 +Y K+++A++ RSVV+ +PTS+KS +LK VEL+H LD SR + AAG +S AL++ +S L + + +VP++++ RK+ ++ +R+L +F+ LL+DEVDLIL PL+SEL+WP+GAK+PLDFTR + G GLRWQ+P+HLL+A FYY G M+V F DSR + + EV + Sbjct: 2627 LYLKLLQAKETRSVVLASPTSIKSLLLKFVELLHMLDKGTSRARSRWIAHAALAAAAGRKRVSRALKRLFGRKSGLQVAEEALQGGATVVPLDDVGQLTVRKEMDLCLRILQLFQSGVLLIDEVDLILHPLRSELHWPVGAKQPLDFTRPIATEKGKDPGGGGSAGGPETEEGLRWQLPWHLLDAVFYYQTGSMSVP--FTDSREAKTILDKIREVLR 2842 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12972.1865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12972.1865.1 >prot_H-paniculata_contig12972.1865.1 ID=prot_H-paniculata_contig12972.1865.1|Name=mRNA_H-paniculata_contig12972.1865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp MYWKVVEARDRRSVVVTTPTSVKSFMLKLVELVHKLDVSRLQRADDREDDback to top mRNA from alignment at H-paniculata_contig12972:4708..5986+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12972.1865.1 ID=mRNA_H-paniculata_contig12972.1865.1|Name=mRNA_H-paniculata_contig12972.1865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1279bp|location=Sequence derived from alignment at H-paniculata_contig12972:4708..5986+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12972:4708..5986+ >mRNA_H-paniculata_contig12972.1865.1 ID=mRNA_H-paniculata_contig12972.1865.1|Name=mRNA_H-paniculata_contig12972.1865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig12972:4708..5986+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |