prot_H-paniculata_contig12840.1785.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12840.1785.1
Unique Nameprot_H-paniculata_contig12840.1785.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length95
Homology
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BLAST of mRNA_H-paniculata_contig12840.1785.1 vs. uniprot
Match: A0A6H5KFF8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFF8_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.820e-17
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0 
Query:   15 EHSSELVWPRGLAFGAGSSSGLLFSEHLGAVRLLSDPAGGVEPDTIAQEDGYPAAVAVRALKSRAAKEGLLGKFFTETAQ 94
            E   +LVWPRGLAFGA +S+GLLF E+LG+VRLL  P      DTIA+ D YPAAVA+ AL + A +EG   +FFT + +
Sbjct:  441 EAKGQLVWPRGLAFGAEASTGLLFGEYLGSVRLLPLPPARGSVDTIAEADSYPAAVAIHALVAAAGREGAEERFFTHSVR 520
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12840.1785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KFF8_9PHAE2.820e-1755.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12840contigH-paniculata_contig12840:2520..3345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12840.1785.1mRNA_H-paniculata_contig12840.1785.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12840 2489..3617 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12840.1785.1 ID=prot_H-paniculata_contig12840.1785.1|Name=mRNA_H-paniculata_contig12840.1785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
MVLSSAGNSTSGVGEHSSELVWPRGLAFGAGSSSGLLFSEHLGAVRLLSD
PAGGVEPDTIAQEDGYPAAVAVRALKSRAAKEGLLGKFFTETAQ*
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