mRNA_H-paniculata_contig9980.17558.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9980.17558.1
Unique NamemRNA_H-paniculata_contig9980.17558.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: H3G557_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G557_PHYRM)

HSP 1 Score: 155 bits (392), Expect = 6.140e-44
Identity = 80/195 (41.03%), Postives = 120/195 (61.54%), Query Frame = 1
Query:   34 FEHRGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIGF*CRGSTTLFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKYAQTN 618
            + +R +VG+LMY +T TRPD A AV +  +  +   +      KRI +YL    DLG  F   + G     + DA+WAGD++ R+STT Y+F +NGS ISW S++Q  V  S T+A+Y+A   A +E V+LR+LL  +G  C G+TT+FQDN+  + L+K    H RTKHI  ++H +R+   + V+ L+Y  T+
Sbjct:   33 YPYRELVGALMYLATCTRPDIAQAVGEVAKFCEWYNKSHRVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDSRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTD 226          
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 157 bits (396), Expect = 1.550e-43
Identity = 80/197 (40.61%), Postives = 121/197 (61.42%), Query Frame = 1
Query:   34 FEHRGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIGF*CRGSTTLFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKYAQTNPL 624
            + +R +VG+LMY +T TRPD A AV +  +  +   +  +   KRI +YL    DLG  F   + G     + DA+WAGD++ R+STT Y+F +NGS ISW S++Q  V  S T+A+Y+A   A +E V+LR+LL  +G  C G+TT FQDN+  + L+K    H RTKHI  ++H +R+   + V+ L+Y  T+ +
Sbjct:   92 YPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEM 287          
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 155 bits (391), Expect = 7.350e-42
Identity = 79/197 (40.10%), Postives = 120/197 (60.91%), Query Frame = 1
Query:   34 FEHRGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIGF*CRGSTTLFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKYAQTNPL 624
            + +R +VG+LMY +T TRPD A AV +  +  +   +  +   KRI +YL    DLG  F   + G     + DA WAGD++ R+STT Y+F +NGS ISW S++Q  V  S T+A+Y+A   A +E V+LR+LL  +G  C  +TT+FQDN+  + L+K    H RTKHI  ++H +R+   + V+ L+Y  T+ +
Sbjct:  188 YPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEM 383          
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA)

HSP 1 Score: 150 bits (379), Expect = 8.200e-42
Identity = 76/194 (39.18%), Postives = 119/194 (61.34%), Query Frame = 1
Query:   43 RGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIGF*CRGSTTLFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKYAQTNPL 624
            R +VG+LMY +T TRP+ AYAV +  +  +   +  +   KRI +YL    D+G  F     G     + DA+WAGD++ R+STT Y+F +NGS ISW S++Q  V  S T+A+Y+A   A +E V+LR+LL  +G+  +G+TT++QDN+  + L+K    H RTKHI  ++H +R+      + L+Y  T+ +
Sbjct:   23 RELVGALMYLATSTRPNIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGE-LVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEM 215          
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE)

HSP 1 Score: 150 bits (380), Expect = 2.020e-41
Identity = 78/196 (39.80%), Postives = 113/196 (57.65%), Query Frame = 1
Query:   40 HRGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIG-F*CRGSTTLFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKYAQTNPL 624
            +R  VG +MY    TRPD A AV    +   DPC   +   KR+ RYL   P+ G  F  + +G     + DADWAGD+E R+ST+ Y+F +NG  ISW S+KQ+ V  S T+A+Y+A  EA KE V+L+  LG +G      +  +F+DN+ ++ L+K    H RTKHI  R+H +R+    G + L+Y  T  +
Sbjct:   37 YRSAVGGIMYLMVATRPDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDM 231          
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: H3H7M7_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7M7_PHYRM)

HSP 1 Score: 157 bits (396), Expect = 1.300e-40
Identity = 80/191 (41.88%), Postives = 119/191 (62.30%), Query Frame = 1
Query:   34 FEHRGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIGF*CRGSTTLFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKY 606
            + +R +VG+LMY +T TRPD A AV +  +  +   +  +   KRI +YL   PDLG  F   + G     + DA+WAGD++ R+STT Y+F +NGS ISW S++Q  V  S T+A+Y+A   A +E V+LR+LL  +G  C G+TT+FQDN+  + L+K    H RTKHI  ++H +R    + V+ L+Y
Sbjct:  957 YPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTPDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLRVKVEDKVIVLEY 1146          
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: A0A5S6QJX2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QJX2_TRIMR)

HSP 1 Score: 152 bits (385), Expect = 2.270e-40
Identity = 79/208 (37.98%), Postives = 123/208 (59.13%), Query Frame = 1
Query:    1 VQESSSRSANSFEHRGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIGF*CRGSTTLFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKYAQTNPL 624
             +E S +  ++ E+R  +GSL+Y +T TRPD ++AV Q  R M+ P +  +   KR+ RYL+  P     F   +       F+DADWAGD  DRKST+ Y FKV  S ++W SRKQ  V  S T+A+YIAA EA ++ +++R++L  IG      T +++DN+  + +++      RTKHI  R+H +R+    G++AL Y  +N +
Sbjct:  258 TEEESPKLPDNAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRFS-ANGSIKLSGFVDADWAGDQADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYIAASEACRDLLWIRQVLEDIGIEQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYHQLRELQESGIIALTYCPSNEM 464          
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: H3G656_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G656_PHYRM)

HSP 1 Score: 145 bits (366), Expect = 4.850e-40
Identity = 77/196 (39.29%), Postives = 111/196 (56.63%), Query Frame = 1
Query:   40 HRGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIGF*CRGSTT-LFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKYAQTNPL 624
            +R  VG+LMY    TRPD A AV    +   DPC   +   KR+ RYL   P  G  F  + D  G   + DADWAGD+E R+ST+ Y F +NG  ISW S+KQ+ V  S T+A+Y+A  EA +E V+L+  L  +G         +++DN+ ++ L+K    H RTKHI  R+H +R+   +G + L+Y  T  +
Sbjct:    7 YRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYKDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYISTTDM 201          
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: A0A6A4ZBJ3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZBJ3_9STRA)

HSP 1 Score: 147 bits (370), Expect = 8.910e-40
Identity = 77/196 (39.29%), Postives = 114/196 (58.16%), Query Frame = 1
Query:   40 HRGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIG-F*CRGSTTLFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKYAQTNPL 624
            +R  VG LMY   GTRPD A AV    +   DPC   +   KR+FRY+      G  F   S+  G + + DADWAGD+E R+ST+ Y F +NG  ISW S+KQ+ V  S T+A+Y+A  EA +E ++L+  L  IG    + +  +++DN+ ++ L+K    H RTKHI  R+H +R+   +G + L+Y  T  +
Sbjct:   60 YRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIQGTKTHGIVFQAGSED-GLQGYSDADWAGDIETRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALTEATQEAIWLKAFLCEIGEMETKSAVKIYEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCSTKDM 254          
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Match: A0A090BBM5_HYAAE (RxLR effector candidate protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090BBM5_HYAAE)

HSP 1 Score: 146 bits (369), Expect = 1.630e-39
Identity = 75/197 (38.07%), Postives = 119/197 (60.41%), Query Frame = 1
Query:   34 FEHRGMVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPDLGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*YIFKVNGSVISWYSRKQQLVTWSGTKAKYIAAGEAGKETVYLRELLGSIGF*CRGSTTLFQDNKSAVNLSKGSGAHCRTKHIGARWHGIRKWFREGVLALKYAQTNPL 624
            F +R +VG+LMY +T TRPD A+AV +  +  +   +  ++  KRI +YL    D+   F   + G     F DA+WAGD++ R+STT Y+F +NGS ISW S++Q  V  S T+A+Y++   A +E ++LR LL  + +    +TT+FQDN+  + L+K    H RTKHI  ++H +R+     V+AL++  T  +
Sbjct:   92 FPYRELVGALMYITTCTRPDIAHAVGEVAKYCERYNKSHWTAAKRIIKYLKTTQDMSIVFSGFNKGELLR-FADANWAGDLDTRRSTTGYVFFLNGSAISWNSKRQSTVATSSTEAEYMSLYSATQEAIWLRCLLKDLQYCAEVATTIFQDNQGCIALAKNPVYHSRTKHIDIKFHFLREKVASEVIALEFKPTEEM 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9980.17558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3G557_PHYRM6.140e-4441.03Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
H3GB69_PHYRM1.550e-4340.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB17_PHYRM7.350e-4240.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P4XPH2_9STRA8.200e-4239.18RxLR effector candidate protein (Fragment) n=1 Tax... [more]
A0A090C2V0_HYAAE2.020e-4139.80RxLR effector candidate protein (Fragment) n=3 Tax... [more]
H3H7M7_PHYRM1.300e-4041.88CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A5S6QJX2_TRIMR2.270e-4037.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3G656_PHYRM4.850e-4039.29Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
A0A6A4ZBJ3_9STRA8.910e-4039.29Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A090BBM5_HYAAE1.630e-3938.07RxLR effector candidate protein n=1 Tax=Hyaloperon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9980contigH-paniculata_contig9980:1016..1639 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score76.6
Seed ortholog evalue6e-12
Seed eggNOG ortholog67593.Physo142768
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3Q8Z1@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size624
Cds size252
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9980.17558.1prot_H-paniculata_contig9980.17558.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9980 1340..1591 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931228.5191932-UTR-H-paniculata_contig9980:1015..13391622931228.5191932-UTR-H-paniculata_contig9980:1015..1339Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9980 1016..1339 -
1691481648.0849044-UTR-H-paniculata_contig9980:1015..13391691481648.0849044-UTR-H-paniculata_contig9980:1015..1339Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9980 1016..1339 -
1622931228.5513015-UTR-H-paniculata_contig9980:1591..16391622931228.5513015-UTR-H-paniculata_contig9980:1591..1639Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9980 1592..1639 -
1691481648.1057427-UTR-H-paniculata_contig9980:1591..16391691481648.1057427-UTR-H-paniculata_contig9980:1591..1639Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9980 1592..1639 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931228.535027-CDS-H-paniculata_contig9980:1339..15911622931228.535027-CDS-H-paniculata_contig9980:1339..1591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9980 1340..1591 -
1691481648.095693-CDS-H-paniculata_contig9980:1339..15911691481648.095693-CDS-H-paniculata_contig9980:1339..1591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9980 1340..1591 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9980.17558.1

>prot_H-paniculata_contig9980.17558.1 ID=prot_H-paniculata_contig9980.17558.1|Name=mRNA_H-paniculata_contig9980.17558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=84bp
MVGSLMYASTGTRPDAAYAVHQAVRRMKDPCREGFSTCKRIFRYLSIVPD
LGTTFGDKSDGHGFEDFIDADWAGDVEDRKSTT*
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mRNA from alignment at H-paniculata_contig9980:1016..1639-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9980.17558.1 ID=mRNA_H-paniculata_contig9980.17558.1|Name=mRNA_H-paniculata_contig9980.17558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=624bp|location=Sequence derived from alignment at H-paniculata_contig9980:1016..1639- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTACAAGAAAGCAGTAGTAGAAGTGCCAATTCATTTGAACACAGAGGCAT GGTAGGATCACTCATGTACGCCTCGACAGGAACTCGACCTGATGCAGCAT ATGCGGTACACCAAGCAGTACGTCGTATGAAGGACCCATGTCGAGAAGGC TTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTATCGTGCCTGACCT CGGCACTACATTCGGCGATAAGAGCGATGGTCACGGTTTTGAAGATTTCA TTGATGCCGACTGGGCGGGAGATGTCGAGGACCGAAAGTCCACAACATGA TACATATTCAAGGTAAACGGTAGTGTGATAAGTTGGTACTCCAGGAAGCA ACAGTTAGTCACGTGGTCCGGCACAAAGGCAAAGTACATTGCCGCAGGAG AAGCGGGAAAGGAGACGGTATATCTCAGGGAGTTACTAGGATCGATAGGT TTCTGATGTAGGGGGAGCACGACATTGTTTCAGGACAATAAGTCAGCTGT TAATCTCAGTAAGGGATCTGGCGCACACTGCAGAACAAAGCACATCGGAG CCCGCTGGCACGGAATTCGAAAGTGGTTTCGGGAAGGAGTACTGGCGCTG AAATACGCGCAGACCAACCCGCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig9980:1016..1639-

>mRNA_H-paniculata_contig9980.17558.1 ID=mRNA_H-paniculata_contig9980.17558.1|Name=mRNA_H-paniculata_contig9980.17558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=504bp|location=Sequence derived from alignment at H-paniculata_contig9980:1016..1639- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTAGGATCACTCATGTACGCCTCGACAGGAACTCGACCTGATGCAGC
ATATGCGGTACACCAAGCAGTACGTCGTATGAAGGACCCATGTCGAGAAG
GCTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTATCGTGCCTGAC
CTCGGCACTACATTCGGCGATAAGAGCGATGGTCACGGTTTTGAAGATTT
CATTGATGCCGACTGGGCGGGAGATGTCGAGGACCGAAAGTCCACAACAT
GAATGGTAGGATCACTCATGTACGCCTCGACAGGAACTCGACCTGATGCA
GCATATGCGGTACACCAAGCAGTACGTCGTATGAAGGACCCATGTCGAGA
AGGCTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTATCGTGCCTG
ACCTCGGCACTACATTCGGCGATAAGAGCGATGGTCACGGTTTTGAAGAT
TTCATTGATGCCGACTGGGCGGGAGATGTCGAGGACCGAAAGTCCACAAC
ATGA
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