Homology
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
D7G7K6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K6_ECTSI)
HSP 1 Score: 335 bits (860), Expect = 2.180e-111
Identity = 169/201 (84.08%), Postives = 187/201 (93.03%), Query Frame = 1
Query: 1 MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQLLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIRLRQKADK 603
MVKHNNV+PN HFHKKWQRRVRTWFDQPAKKKARRQARQ KAAKMAPRPTQLLRP VHCPTIKYNSKVRLGRGFN++ELKEAG+SKKTALTIGIAVDHRRT+KSE +F +NVARLKEYRANLI+FPRG K+ PKKGDSSL++Q +ATQVTGVTMPLVKA KPVEF+ VTAEM T+LHSERR+ARNE K+AGIR+RQK +K
Sbjct: 1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQLLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDSSLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSLHSERRVARNEFKLAGIRIRQKEEK 201
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
A0A836C9T6_9STRA (60S ribosomal protein L13 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T6_9STRA)
HSP 1 Score: 252 bits (643), Expect = 1.360e-78
Identity = 129/204 (63.24%), Postives = 154/204 (75.49%), Query Frame = 1
Query: 1 MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQLLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIRLRQKADKDAA 612
MVKHNNV+PN HFHKKWQ RV+TWFDQP KKKARR R KAA +APRPTQLLRP VHCPTIKYN KVRLGRGF + ELKEAG+S+K A TIGI+VDHRRT++S AT Q+NVARLKEY++ LI+FPR PK GD++ A+A QVTG MPL KA V F VT EMK + R+AR+++++ GIR +Q A+K A
Sbjct: 1 MVKHNNVIPNGHFHKKWQTRVKTWFDQPMKKKARRMRRAAKAAAVAPRPTQLLRPAVHCPTIKYNMKVRLGRGFTLAELKEAGISRKVARTIGISVDHRRTNRSLATMQNNVARLKEYQSKLIIFPRRSNAKPKAGDAAPGDTAAAAQVTGAVMPLTKAVPAVAFAAVTDEMKAFKAYEALRVARSDARLVGIRKKQAAEKKDA 204
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
K8Z7Z7_NANGC (Large subunit ribosomal protein L13e n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7Z7_NANGC)
HSP 1 Score: 238 bits (606), Expect = 4.530e-73
Identity = 122/194 (62.89%), Postives = 145/194 (74.74%), Query Frame = 1
Query: 1 MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQLLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIR 582
MV+HNNV+PNQHFHK WQ RV+TWF QPAKKKARR AR+ KAA +APRPTQLLRP VH PT +YN K RLGRGF M ELKEAGL+KK A ++GIAVDHRRT+ S + Q+NV RLKEY++ LIVFP G PK GDSS + +A Q TG +PL KK VEFV V+ E+K H+ R+ARN+ K+ GIR
Sbjct: 1 MVRHNNVIPNQHFHKDWQTRVKTWFVQPAKKKARRLARKAKAAALAPRPTQLLRPVVHAPTQRYNHKTRLGRGFTMQELKEAGLTKKYAKSVGIAVDHRRTNLSVESLQANVQRLKEYKSKLIVFPMGRVKKPKAGDSSTAECRAAVQATGTVLPLPTGKKAVEFVSVSEELKNFRAHTALRVARNDQKLDGIR 194
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
A0A2D4BG90_PYTIN (60S ribosomal protein L13 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG90_PYTIN)
HSP 1 Score: 233 bits (594), Expect = 2.850e-71
Identity = 118/205 (57.56%), Postives = 157/205 (76.59%), Query Frame = 1
Query: 1 MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQ-LLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIRLRQKADKDAA 612
MVKHNNV+PN HFHK WQRR++TWFDQ AKKKARR R+ KAA +APRP LLRP VHCPT+KY SKVR G+GF+++ELKEAG+SKK AL+IGIAVD+RRT+KS + Q+NV RLK Y+A L++FPR N PK GDS+ ++ A+A QVTG P+ + E +T EMK T+++++ R+AR ++++AG + ++ ADK AA
Sbjct: 1 MVKHNNVIPNGHFHKDWQRRIKTWFDQAAKKKARRLRRKEKAAAIAPRPAAGLLRPAVHCPTVKYASKVRAGKGFSLEELKEAGISKKQALSIGIAVDYRRTNKSVESLQANVQRLKAYKAKLVIFPRKSNNKPKHGDSTPEETANAVQVTGPIFPIARKTVKSESAVITEEMKNTSVYAQLRVARADARIAGKQKKRLADKAAA 205
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
A0A1V9ZEJ6_9STRA (60S ribosomal protein L13 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEJ6_9STRA)
HSP 1 Score: 228 bits (580), Expect = 3.670e-69
Identity = 113/205 (55.12%), Postives = 154/205 (75.12%), Query Frame = 1
Query: 1 MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQ-LLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIRLRQKADKDAA 612
MVKHNNV+PN HFHK WQ R++TWFDQ +KKK+RR R+ KAA +APRP LLRP VHCPT+KY SKVR GRGF +DELKEAG+S+K ALTIGIAVD+RRT+KS + Q+NV RLK Y++ L+VFPR + PK GDS+L++ +A Q TG +P+ + K + +T +MK T++ + R+AR ++++ G+R ++ A+K AA
Sbjct: 1 MVKHNNVIPNGHFHKDWQNRIKTWFDQASKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTVKYGSKVRAGRGFTLDELKEAGISRKQALTIGIAVDYRRTNKSVESLQANVQRLKTYKSKLVVFPRKRASKPKHGDSTLEETKNAVQHTGAILPIARVSKDIATAKITDDMKKTSVVNTLRLARADARLVGLRKKKAAEKAAA 205
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
A0A7R9WAC9_9STRA (60S ribosomal protein L13 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WAC9_9STRA)
HSP 1 Score: 227 bits (578), Expect = 7.300e-69
Identity = 114/198 (57.58%), Postives = 147/198 (74.24%), Query Frame = 1
Query: 1 MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQ-LLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIRLRQ 591
MVKHNNV+PNQHFHK+WQ RV+TWFDQPAKKKARR AR+ KAA +APRP LLRP V CPT +YN+KVR GRGF ++ELK AG+SK+ A TIGIAVDHRR++KS AT Q NV RL Y+A L+VFPRG PK GD+S+++ ++ATQ+TG P+ EFV +T ++K N + RI R ++ G+R+++
Sbjct: 1 MVKHNNVVPNQHFHKQWQNRVKTWFDQPAKKKARRAARKAKAAAIAPRPAAGLLRPAVRCPTQRYNTKVRAGRGFTLEELKTAGISKRVARTIGIAVDHRRSNKSTATLQENVQRLNAYKAKLVVFPRGSNAKPKTGDASVEETSAATQLTGPLFPITAKPVSTEFVALTDDLKAKNAYRTLRIERCNRRMNGLRIKR 198
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
A0A7S2UYA0_9STRA (60S ribosomal protein L13 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYA0_9STRA)
HSP 1 Score: 223 bits (568), Expect = 2.070e-67
Identity = 118/202 (58.42%), Postives = 150/202 (74.26%), Query Frame = 1
Query: 1 MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQ-LLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIRLRQKADK 603
MVKHNNV+PN H HKKWQRRV+TWFDQPAKKK RR AR+ KAAK+APRP LLRP VHC T KY+SK RLGRGF++ ELKEAG+ KK A TIGIAVDHRRT+KS Q+N+ARL E++A L+VFPR PK GDS+ ++ + ATQ+TG +P+VK + +E VT EMK + R+A+++++V G+R + A K
Sbjct: 1 MVKHNNVVPNVHCHKKWQRRVKTWFDQPAKKKNRRLARKAKAAKLAPRPVSGLLRPVVHCSTQKYSSKTRLGRGFSLAELKEAGIPKKVARTIGIAVDHRRTNKSVEAMQANIARLAEFKARLVVFPRKSNQKPKNGDSAPEETSQATQLTGPILPIVKTDE-LETAAVTDEMKNFKAFTSLRLAKSDARVLGLRASRAAAK 201
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
A0A1V9ZTH1_9STRA (60S ribosomal protein L13 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZTH1_9STRA)
HSP 1 Score: 220 bits (560), Expect = 3.590e-66
Identity = 112/205 (54.63%), Postives = 147/205 (71.71%), Query Frame = 1
Query: 1 MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQ-LLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIRLRQKADKDAA 612
MVKHNNV+PN HFHK WQ R++TWFDQ AKKK+RR R+ KAA +APRP LLRP VHCPT+KY SKVR GRGF +DELKEAG+S+K ALTIGIAVD+RRT+KS + Q+NV RLK Y++ L+VFPR + PK GD+S ++ S Q G P+ +A V +T EMK ++ R+AR ++++ G+R ++ A+K A
Sbjct: 1 MVKHNNVIPNGHFHKDWQNRIKTWFDQAAKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTVKYGSKVRAGRGFTLDELKEAGISRKQALTIGIAVDYRRTNKSVESLQANVQRLKAYKSKLVVFPRKRISKPKNGDASAEELKSVVQHKGALFPIARASTEVATAKITEEMKNDSVVKTLRLARADARLVGLRKKKAAEKAEA 205
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
A0A024TY88_9STRA (60S ribosomal protein L13 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TY88_9STRA)
HSP 1 Score: 218 bits (555), Expect = 1.940e-65
Identity = 108/203 (53.20%), Postives = 151/203 (74.38%), Query Frame = 1
Query: 4 VKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQ-LLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIRLRQKADKDA 609
+KHNNV+PN HFHK WQ R++TWFDQ +KKK+RR R+ KAA +APRP LLRP VHCPTIKY SKVR GRGF +DELKEAG+S+K ALTIG++VD+RRT+KS + Q+NV RLK Y++ L++FPR + PK GDS +++ +ATQ+ G +P+ + K V +T E+K ++ R+AR ++++ G+R ++KAD+ A
Sbjct: 1 MKHNNVIPNGHFHKDWQNRIKTWFDQASKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTIKYGSKVRAGRGFTLDELKEAGISRKQALTIGVSVDYRRTNKSVESLQANVQRLKTYKSKLVLFPRKRASKPKAGDSKVEETKNATQLIGAVLPIARPSKEVPTAKITEELKNNSVVKTLRLARADARLVGLR-KKKADEKA 202
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Match:
H3G8S1_PHYRM (60S ribosomal protein L13 n=5 Tax=Peronosporaceae TaxID=4777 RepID=H3G8S1_PHYRM)
HSP 1 Score: 216 bits (549), Expect = 1.530e-64
Identity = 110/206 (53.40%), Postives = 148/206 (71.84%), Query Frame = 1
Query: 1 MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPTQ-LLRPGVHCPTIKYNSKVRLGRGFNMDELKEAGLSKKTALTIGIAVDHRRTSKSEATFQSNVARLKEYRANLIVFPRGPKNDPKKGDSSLDQQASATQVTGVTMPLVKAKKPVEFVDVTAEMKGTNLHSERRIARNESKVAGIRLRQKADKDAAK 615
MVKHNNV+PN HFHK W+ R++TWFDQ AKKK RR AR+ KAA +APRP LLRP VHCPTIKY SKVR G+GF ++ELKEAG+++K A++IGIAVD RRT+KS + Q+NV RLK Y+A L+VFPR N PK GDSS ++ +A Q TG +P+ ++ +T EMK ++ ++ R+AR + ++ G + ++ ADK K
Sbjct: 1 MVKHNNVIPNGHFHKYWESRIKTWFDQAAKKKTRRLARKAKAAAIAPRPAAGLLRPAVHCPTIKYGSKVRAGKGFTLEELKEAGINRKQAISIGIAVDFRRTNKSVESLQANVHRLKAYKAKLVVFPRKSVNKPKNGDSSPEETKNAVQYTGAILPITRSSVKSTTAVITPEMKEKSVFTQLRVARADKRIFGKQAKRLADKKEKK 206
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9651.17344.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.18e-111 / Id = 84.08 Expect = 1.36e-78 / Id = 63.24 Expect = 4.53e-73 / Id = 62.89 Expect = 2.85e-71 / Id = 57.56 Expect = 3.67e-69 / Id = 55.12 Expect = 7.30e-69 / Id = 57.58 Expect = 2.07e-67 / Id = 58.42 Expect = 3.59e-66 / Id = 54.63 Expect = 1.94e-65 / Id = 53.20 Expect = 1.53e-64 / Id = 53.40 Sequence D7G7K6_ECTSI A0A836C9T6_9STRA K8Z7Z7_NANGC A0A2D4BG90_PYTIN A0A1V9ZEJ6_9STRA A0A7R9WAC9_9STRA A0A7S2UYA0_9STRA A0A1V9ZTH1_9STRA A0A024TY88_9STRA H3G8S1_PHYRM Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 338.6 Seed ortholog evalue 2.1e-90 Seed eggNOG ortholog 2880.D7G7K6 Preferred name RPL13 KEGG ko ko:K02873,ko:K10755 KEGG Pathway ko03010,ko03030,ko03420,ko03430,map03010,map03030,map03420,map03430 KEGG Module M00177,M00179,M00289,M00295 Hectar predicted targeting category other localisation GOs GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006412,GO:0006518,GO:0006807,GO:0006914,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009506,GO:0009719,GO:0009725,GO:0009735,GO:0009986,GO:0009987,GO:0010033,GO:0010467,GO:0015934,GO:0016020,GO:0016236,GO:0019538,GO:0022625,GO:0022626,GO:0030054,GO:0030312,GO:0031090,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0034645,GO:0042221,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0055044,GO:0061919,GO:0070013,GO:0071704,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 EggNOG free text desc. structural constituent of ribosome EggNOG OGs COG4352@1,KOG3295@2759 Ec32 ortholog description Ribosomal protein L13e Ec32 ortholog Ec-22_002060.1 COG Functional cat. J Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE br01610,ko00000,ko00001,ko00002,ko03011,ko03032,ko03036,ko03400 Exons 7 Model size 1362 Cds size 618 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9651.17344.1
>prot_H-paniculata_contig9651.17344.1 ID=prot_H-paniculata_contig9651.17344.1|Name=mRNA_H-paniculata_contig9651.17344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=206bp
MVKHNNVLPNQHFHKKWQRRVRTWFDQPAKKKARRQARQLKAAKMAPRPT back to top mRNA from alignment at H-paniculata_contig9651:3114..8365+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9651.17344.1 ID=mRNA_H-paniculata_contig9651.17344.1|Name=mRNA_H-paniculata_contig9651.17344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5252bp|location=Sequence derived from alignment at H-paniculata_contig9651:3114..8365+ (Halopteris paniculata Hal_grac_a_UBK monoicous)ATGGTGAAGCACAACAACGTGCTGCCTAACCAGCATTTCCACAAGAAATG
GCAGAGGAGGGTCCGGACATGGTTCGACCAG GTACGCAAGCGTTCTCCAA
GAGTACTATTCAGGTCTACCGTGCTGCATTGTACACAGACTGCTTTTCAT
GGCAGTGGGGAAGGCTAGTGGACAAATCAACTGGGGTAGCCAGGGTGACC
TATACTCATCGGTGGCATACTGTTGGACATAGCACAATGTCCTGACGTTG
ACACTGCAACCGTTTTATTATGTCTCGACTGTTGTAGTGCGTGGATGGAT
GTGTGACATAGAAGCGCTCTGCCATCAAATTGAGCAGACGCGGTCGAAAC
CACCTGTTTCTGTATCTTCTATACCACCCCTTATCTGTGTACCTACCAAA
TCTTGAGCATCGGCTTCACTACTGAGGGAAATGCGTTTTCTTGTCCCCTT
GTGGGATGAGGGGTAATCATGATGCTGTCGTTGCTGATATAGTTTCAAAA
TTTGTACTTTAATGAGAGCTGTCGCGGGTCACTCTCTTGGCTCATTATAT
TTCACCCGTCCGATGAAGTAGGAGGCGATTCCATACACTGCACGGACTTT
TCATCACGTTACAAGCACGTCGCAACGTGACATTCACCTCGAAAAGTCAT
CATACTTGGCATGATGGATAAACTTGCTTCTGTCAAGCCACTGGAAGCTG
TTGTCTTTGTTCTAGCTCATCTAAGCGATAGAAAACGAAGATTTGACGAT
GTCCTTGGGCTTGTTGAAACTGAAAAAAGGTACTTGAACGTTCAAGTCGT
CGCAGCATCTTCCCGAACTGCGAGTACTTGATCCGGATTTTGAGTGTTCA
CTTACACCGTTTCCAATGTTACCGTCGATTCACCTGGCATCTACAGCCTG
TGTATGCTTCACGCGGTCACCCTCTCAGCAAAATTTCGTCGAAGTTTAAT
TGAGAAGAAAAGAAGGCGTTTTCATGGGTGTTAGGAGTGTCTGCAGAAGA
TCATTTTGACTGTTATCTTCGAGTCCACTTTATTGTAAACGTGACCAGTC
CAGTTTGCTCGCTTGACAAAAGGATTCAATGAATGTGGTCGAGTTACTCT
CACAAGTTGACCCTTTCTTTGATCCTGTTCTTAATGTTGACGTATTCACG
ATCTGATCACTCGTCTATTCTCTTGTTTTGTAGCCAGCGAAAAAGAAGGC
GCGTCGCCAAGCGCGGCAGCTGAAAGCTGCCAAGATGGCGCCACGCCCGA
CACAGCTTCTGCGACCCGGAGTGCACTGCCCCACCATCAAG GTGTGTGTT
CATTCTGGGTGGGTCCCCAGCGCGTTGTACTATAAGACTGGTGTCGCTAG
TGTGATATTCACCGCAGTTCTGTAGCCAATAATGAGGGTTTTTTTTAACA
AGATTACAGTGCCACCATAATATGAACACGAGTGCAGAGGTAGATGGCCA
CATTACATGTTAATACTCGGAATAGAGTCATGTTTGACCGCTGCCATATT
CAGATGACTGATGAAGCGTCCCATGTATCATCTATTGAATCCACAGCGTA
AACTGCTTCAAAAACAAAAGTTTCGGGACCTGGCGTGGTCGAGGGAGTTA
TTTTGTCACGTCTGTGCTTTCGACTTGACGGGTGTACACGGCTTTGAAAT
CTCTTGGACTTGATGCACCCGCGTTTAGTCCCGCGTGCAGAGATTTTACA
CACAGCGCTGTGAAGGCAGTCCGCACTGAAAGTCTGGGACCAGGGACAGG
ATGATGGTTTCATGATGCGATGGGAAACATGTTGATTCACACACTTGTAG
GAAGACTTCTGCCCCTGAGAGTCGTATTTTGAATAAGACGGAGATGAGTA
TGGGGCATTTGGAAACTGCGAATAATCGGAAGTCTTGCCCCTTATCTGAT
TAGTGAGCCTACTCGACATTCCCGTCTTCGTACCCGCCGTCCACGCTCGA
TGGTTTCTGGCTACGCGTCACTGACCCCACATTTGCTCCCAAATCTCTTG
TCACTTTCTCGCGTCCGTGAAATCTTTTGGTGCGCGATGACTGTCCTATG
GAGTACAGTACAACTCGAAGGTCCGCCTTGGCCGCGGATTCAACATGGAT
GAGCTCAAG GTCCGTATGTCTAGCTTGGAATGGGTACCTCTTAAGATTTC
GCAGTGGGTGATGGTTTATTCTTTCTAGTGAACACGTGAACCATGAAACA
ACTCGTTCATGGTTGGACATTATTTTGTTCCGAAGGGGTGATGTTGGGGT
TCCCAGACTTTTTTCAAATATCTCCCACGCGGAGGCTTCAGCATTTATCG
GTTTTGCGCTCTTATCGCACGATACGCTACTCTACACGAATATCCGAACT
TGGTGTAATTTGCTTCTCTTTGATGGCAATTTCTTGTTCTTTTGTCCATT
TGTGCTGCGAGGTATTTCATGTAATCCTGCGACCGGAGTATGGCGTAATA
AAAGGTTAATCCTCACTGTCATCGTCGCCATTTGCAATGACGTACTTAGT
TGTTCATGTACTCAAGACTACTGTCGATAATAAATAAAAATCGAAGCAGC
TGTTCTAAACCTGTTAGCCTGTTTCATATAACATCACCTTCGCAGCACTT
CCGTTTTACACAATCTTCGACACTTTCTTCTCATCAAATTGCTCCTGACA
GGAGGCAGGTCTCTCCAAGAAGACGGCGCTTACTATTGGTATCGCAGTTG
ACCACCGCCGCACCAGCAAGTCG GTAAGTAATATGCCGGCGTCATAGTGT
GTGGCTTGAATGAAACCACAGCATGCACACGTCGAGGAGTCAAGATGTTG
GACGGAGCAAATTTGGATGGGTGCGGTCGGAGAAGTGGATATGTTGTATT
TCCGCCATATGGTGAAAAGCATGGCATTGCTCCTCGGGAAATCGCTTTCG
AATACTTTTCTTGTAATCTTTATTTAGTATGAGGTACATATATTTTCGTC
ATACCAAGATCATTTGGAGACGAAAGATGTGTCGCGTAGGTTTATTCTCG
ATTTCTTATGTAACGAGGTGGTAGCGTGGAGAAACTCGGGTGGCTTCTGT
TGAACATATGAGGGAAAATTTGCCATTTCGAAGCTAAACCAGCATCGCCC
ATCCATTCTTTTGAGGAACTGTCTAGTGTGCGGAACTAGTTTGACATTTG
TGCGTACGGTAAAAAAATGGAAAAATCACAGGAGGCGACCTTCCAAAGCA
ACGTCGCGCGACTGAAGGAGTACCGTGCGAACCTCATTGTCTTCCCCCGC
GGGCCGAAGAACGACCCGAAGAAGGGAGACAGCTCGCTCGACCAGCAGGC
GTCCGCCACTCAG GTACGGCTCATCCGGAAATATTTTCCGATGATATTTG
CTTGGTAATATACTGTACCCTTCGACAATCTTTCATCTCGTGTCATGGAT
ACCAAGAAACAGCTTGGGCACATATTTTGTAGAATCAATCGGTGTCTCCC
TATCGGTCGTATCTCTGAGAACAAATAGTTGCGTTGGTCAACATGATCAC
AGGTTCACTAACCACTTTACTCTCGAGGGGTCATGTTTTGATAGCTGATG
GACTCGAAGAGAGCCAAGTCGAGACATGACGTGAAACCCGACGTCAACTG
TTCACTCCGCTGTGTGAACAACGTTGACCGATGTCCCAAGAATACGGTAG
GTATTTGCTCATTTGTTTAATATTTCCTTGATGTTTCCATCGCGTCCGTA
ATCCAGTATGTAATCTAGGTAACATTCTTTTCTACAATTGTAGTGTCCAG
ATGGATGTATTCTCTTCAGTTTCGCAAACTTATAATTTGGGTTGTGAAAT
ACTTGGTCAAAAAGAGGTGTGGGGGAAGGATTGTTGCACGCAGGAGTTCT
CTATAACATACTCGGGTGTGATGAACTAGATTCTTGAGAATATCCATGAA
TGAATTGGCTGATCTCAGGTACTCCGGGGAGAGGCATGAGGGCGTCAGCT
CAAGATTAAATCATGTGCATTAAATTGACTTTTTTTTTTCTTGCAAATGT
TTTTTTATATCAAGGTCACCGGCGTCACGATGCCGCTTGTGAAGGCGAAG
AAGCCCGTCGAATTCGTGGATGTCACCGCG GTAAGTGGAAGTGTGACGGA
TAATTCGAAACCAATGAGGGATAGTTTCACCGTTTGTTGGTCTTCTGTTG
TCTCCCAAATTATGCAAGAAACGCCGTTGTCCATGCACCAATATGAGTAG
GAAATTTTCCTCTAAATTGAGCATACGTTAACGTGTACGTGGTTTTCAGT
AGTGGATTTGTTGGGCGTTGGGGCGCGCGTTCTGCGAGTCGCTTGTTGAA
CCATGTGAAGGGTGGTCCTTGGTGTAGTAAGCCAATTCGAAGCTGGGAAC
GCCTTGGAACAAACGATCGTACCTGCCCATGGTTTTGATGTGTCGTGCAG
GAGATGAAGGGCACTAACCTTCACAGTGAGAGGCGCATCGCCCGTAACGA
AAGCAAGGTGGCAGGCATCCGTCTTCGTCAAAAGGCCGACAAGGATGCGG
CCAAGTAA ATCGAGAAAGAGTCAAGCTGCGAGAGTCTTCTCGGCCGTCGG
AAATGGATGTCGATGATTCTGCGGTGTTTGCGGACAGCACTGACGCAGGC
TGCTGTACAATACCGCGCAGTCGTCTAGCTTTTCGATGGCTGTTGAAGCT
TTTTGCACCCGTGTTATCGTGACAAGGGAAGAACTGTGCTTGAGGGCGAG
GCTGGACTATTTCAGGGCACTAACGAAAAATGAAGAAAATAAATCGAAAA
ATAACACAAAGTGGACTGGGGATGTGTGAGAACCGACGTACATGTGGGAT
GTGGTGTGGATCACTGATGCTGGGATGGACCATGATGGCGTTTCCTTTTC
ACGAAAGTTCGTCCATGAGCCATTACCGTTGACCTATTTACTCCCATGTG
AATTTCATCTCTAAACTGAATGAAAACTTCGAACGCGAGACATACGGATG
ACGGGGATGTGCGCATATCACATGGAACGTTTCATATTAAGAACACGTGA
TGGGTAAAATTTAATGATTTCGGAGGGTGGGGGAGGTGAAGACGGTACCT
CGGTCGAAACGGAAATTTGTTGTGTATGTCGTGGATATTTTGAAAACCCG
ACACATGTGTTCTTCGCTCTCACCACCTGGAGAAAAAGAAAATGTACCTC
GAGAGCATGATTATGAAGTGAATGGGTTAGAACTTACCGTAACCAATATG
TCGTCACCCGTTTCAATTTCAAGAAATAATAAAATTCACGCAATTTGGGA
AG back to top Coding sequence (CDS) from alignment at H-paniculata_contig9651:3114..8365+
>mRNA_H-paniculata_contig9651.17344.1 ID=mRNA_H-paniculata_contig9651.17344.1|Name=mRNA_H-paniculata_contig9651.17344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1236bp|location=Sequence derived from alignment at H-paniculata_contig9651:3114..8365+ (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top