prot_H-paniculata_contig9647.17336.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9647.17336.1
Unique Nameprot_H-paniculata_contig9647.17336.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length435
Homology
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BLAST of mRNA_H-paniculata_contig9647.17336.1 vs. uniprot
Match: A0A6H5K807_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K807_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 8.180e-34
Identity = 132/417 (31.65%), Postives = 180/417 (43.17%), Query Frame = 0 
Query:    1 LGVAGGGAGGADRFISVFDLSSRTFRPGKALHDRLLACLGAAGGGGKIGGTGXDGGMTEGPAGTPAVAATATATDVEMVMCWWGDNDMGKGSKCEEREGGGSEDGKQGSGVKSESADTSHKSVQGERRAGGDFVGRMAQANIGPTMRACREKGLIRDEKVRGGGVEKKIHREPHQERHLGCGCREVPFPPGLFSVAKKVNLEPDIRFFREVCCPDLDWVGQGLISPPPRISFEGPSAASDNKNGRRQSASADRRGETSAATDAEEGGVRRGMLSVPAEDTQAEPKTETNSMDFVPFREQPPNPMMSGSHSMWSSSTTTGIGESQQSAVEMSSFGGSSADMPKAKAXXXXXXXXXXXKAETTAETAAAKSKISLLMLDLFEWLGAASCGLEAQLRRNPFPPEPYLSEFVTPQHLQYRQ 417
            +GV GG AGG DR++S  DLS+++FRPGK LHDR+L+CL +        G+G DG                    V+MV+ W G   +G+GS            G+ G   ++ES+ TS  S Q     G         A +G      R KG   + K  G             ++   C CR++ FPPG FS A++V+L PDIRFFRE CCPDLD+VGQGL +  P                                        R+G   + A        T  NS                         T+T      ++ V+ S  GGS       +                 ++  +AK    LL+LD+FEWLGA SCGL+A +RR+P PPEPYLS+F TP+HL+YR+
Sbjct:  207 VGVLGGSAGGPDRYVSAVDLSAKSFRPGKPLHDRVLSCLSSC-----RWGSGDDGAA------------------VDMVVHWCGSGGVGQGS------------GEGGELAEAESSGTSEASGQAPEGCG------QGAAAVGR-----RPKGECAEGKQEG-------------QQSQQC-CRDITFPPG-FS-AERVDLTPDIRFFREACCPDLDFVGQGLAATAPTTVQRA---------------------------------RRKGRKGIEA--------TAFNS-------------------------TSTA-----ENLVDGSDDGGSDDHFTDRR--------HPRLPPPVASQPESAKC---LLVLDMFEWLGAVSCGLDAAVRRSPSPPEPYLSKFETPRHLRYRR 479
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9647.17336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K807_9PHAE8.180e-3431.65Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 348..368

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9647contigH-paniculata_contig9647:4410..5714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9647.17336.1mRNA_H-paniculata_contig9647.17336.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9647 4410..5714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9647.17336.1 ID=prot_H-paniculata_contig9647.17336.1|Name=mRNA_H-paniculata_contig9647.17336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=435bp
LGVAGGGAGGADRFISVFDLSSRTFRPGKALHDRLLACLGAAGGGGKIGG
TGGDGGMTEGPAGTPAVAATATATDVEMVMCWWGDNDMGKGSKCEEREGG
GSEDGKQGSGVKSESADTSHKSVQGERRAGGDFVGRMAQANIGPTMRACR
EKGLIRDEKVRGGGVEKKIHREPHQERHLGCGCREVPFPPGLFSVAKKVN
LEPDIRFFREVCCPDLDWVGQGLISPPPRISFEGPSAASDNKNGRRQSAS
ADRRGETSAATDAEEGGVRRGMLSVPAEDTQAEPKTETNSMDFVPFREQP
PNPMMSGSHSMWSSSTTTGIGESQQSAVEMSSFGGSSADMPKAKAAAAAA
AVAEIEKAETTAETAAAKSKISLLMLDLFEWLGAASCGLEAQLRRNPFPP
EPYLSEFVTPQHLQYRQSPGATARLGQAGREAGIE
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