prot_H-paniculata_contig964.17332.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig964.17332.1
Unique Nameprot_H-paniculata_contig964.17332.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length836
Homology
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BLAST of mRNA_H-paniculata_contig964.17332.1 vs. uniprot
Match: D8LU68_ECTSI (Heat Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 5.110e-9
Identity = 47/126 (37.30%), Postives = 59/126 (46.83%), Query Frame = 0 
Query:  293 FPIDLHHILQEEDSTVIGWIEPKRTPSPRSLCEDAFFIRDPERFCVDIMPRYFSQLHHYSRGEYAEHHNTCQAGRMLWVFEIELCLHGFRKTVAHYDVRGRAVAGYTHLSFKRGKPELLVQIQRSI 418
            F + L  IL+ ED  VIGW          S    AF I D E+FC +IMPR+F Q  + S                   F+ +L L+GFRK V     RG    GY H  F+RGKPE L Q++R  
Sbjct:   52 FALGLFQILKTEDPKVIGW----------SASGKAFRIGDSEKFCKEIMPRFFKQNKYSS-------------------FQRQLNLYGFRKLV-----RGNEAGGYMHPLFERGKPEQLSQVRRGF 143
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BLAST of mRNA_H-paniculata_contig964.17332.1 vs. uniprot
Match: A0A6H5JLW3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW3_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 7.490e-9
Identity = 47/126 (37.30%), Postives = 59/126 (46.83%), Query Frame = 0 
Query:  293 FPIDLHHILQEEDSTVIGWIEPKRTPSPRSLCEDAFFIRDPERFCVDIMPRYFSQLHHYSRGEYAEHHNTCQAGRMLWVFEIELCLHGFRKTVAHYDVRGRAVAGYTHLSFKRGKPELLVQIQRSI 418
            F + L  IL+ ED  VIGW          S    AF I D E+FC +IMPR+F Q  + S                   F+ +L L+GFRK V     RG    GY H  F+RGKPE L Q++R  
Sbjct:   29 FALGLFQILKTEDPKVIGW----------SASGKAFRIGDSEKFCKEIMPRFFKQNKYSS-------------------FQRQLNLYGFRKLV-----RGNEAGGYMHPLFERGKPEQLSQVRRGF 120
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig964.17332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LU68_ECTSI5.110e-937.30Heat Shock transcription factor (Partial) (Fragmen... [more]
A0A6H5JLW3_9PHAE7.490e-937.30HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 293..416
e-value: 2.1E-6
score: 28.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 285..419
e-value: 3.9E-7
score: 32.2
NoneNo IPR availablePANTHERPTHR10015:SF206HEAT SHOCK FACTOR PROTEINcoord: 238..475
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 238..475

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig964contigH-paniculata_contig964:238..4601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig964.17332.1mRNA_H-paniculata_contig964.17332.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig964 185..6691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig964.17332.1 ID=prot_H-paniculata_contig964.17332.1|Name=mRNA_H-paniculata_contig964.17332.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=836bp
MGDASTSASASASARTSASGETSANSESREDSRRHKPQPVNSQPGIAKQF
SCRLQASETESSSDEIRALSPLTSNKRYTEPEVKRSARPSALPRENGTMA
GNMVEVGGQGEGTGSRAPFRQGSQVGSPFDSWDDSEDDHMAWRFSMTEGR
GNSSTVQDRSGGQSRPARYEEYEPCWEVVRTRALAWAALTWRINSLEAQP
RPQSLADDDIAESAGLVEASRAADGDLITASHRCQRVGDSSNANGEVRSS
RLKHVRKATCLSPGMPRKKHLIDRWRKDNILQREREDLRQAPFPIDLHHI
LQEEDSTVIGWIEPKRTPSPRSLCEDAFFIRDPERFCVDIMPRYFSQLHH
YSRGEYAEHHNTCQAGRMLWVFEIELCLHGFRKTVAHYDVRGRAVAGYTH
LSFKRGKPELLVQIQRSIAFDGGNGATWFDAGSYARAAAPDGQSPPKYTK
HPLQKPETAIAREPHAIFRMGNGRGNRHMWVLERPSATEAAEFLIRRCTV
DDVVAILSAPQADGGGCQDAGVCDDNPLPHAPWWYWDLLSDGDNETHTRH
TRDMSPMSPPVHDSSLSQCPTHTEGRRSGTMLGRRRRPYNVFESSWINKF
RWYLKKVLEDLGFQVEQMEENQEATGQEAAGSLLPAAIFHTAAGTVFGQV
SPGIRWGGRSVISFADCSNNFHESLRHLPNSWCSFLSSIVSCLRPVKNLA
RSQNRTLLGRQRDGPLDNDIGDVQGLDTCQRLGETRNRKWHTERTENGAS
LESLQSVVEENLGMGMTKSLWGDGDDDDDEDNDDEDDDDDNDDDDDETMN
VTQAAHVMGLMYRANAPSPFGSDRYLLGGRREPGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR027725HSF_fam