Homology
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
D7G521_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G521_ECTSI)
HSP 1 Score: 407 bits (1045), Expect = 1.430e-128
Identity = 273/353 (77.34%), Postives = 290/353 (82.15%), Query Frame = 1
Query: 1 RAKKAELAASYLLWTSDPIHKSLMDVSGLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSGFFKREITARYNIEEDVVSVKPTRAPPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------DPQAKVLYDYDPAGQEGMVPVSAGQMVSIKSQDSPDWWMAATDDGREGWVPANYLEMQ 978
RAKKAELA+S+L WTSDPIHKSL DVSGLKGEAKKQFKN+LGYCGDRKYQYPD LIRDI AKGLEMTELRGELYVQAMKQLTKN PAS RCWEV+T LL CFPPPK++ENYVHYFVRCN P++TREKFKLAVHMSVYDG K TAPSVKEIPPLLSGFF+REI+ARYNIEEDVVSVKPTR PPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PQA+VLYDYDPAGQEGMV VSAGQMV + ++D+PDWWMA+ D G EGWVPANYLEMQ
Sbjct: 40 RAKKAELASSFLEWTSDPIHKSLTDVSGLKGEAKKQFKNMLGYCGDRKYQYPDPLIRDIVAKGLEMTELRGELYVQAMKQLTKNANPASVQRCWEVVTMLLTCFPPPKDMENYVHYFVRCNAPEDTREKFKLAVHMSVYDGVKETAPSVKEIPPLLSGFFEREISARYNIEEDVVSVKPTRPPPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGYGQPAAGTNGGGADPAMXXXXXXXXXXXXXXXXPSEPQARVLYDYDPAGQEGMVAVSAGQMVGVTNRDNPDWWMASLDGGVEGWVPANYLEMQ 392
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE)
HSP 1 Score: 400 bits (1027), Expect = 1.270e-115
Identity = 259/353 (73.37%), Postives = 278/353 (78.75%), Query Frame = 1
Query: 1 RAKKAELAASYLLWTSDPIHKSLMDVSGLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSGFFKREITARYNIEEDVVSVKPTRAPPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------DPQAKVLYDYDPAGQEGMVPVSAGQMVSIKSQDSPDWWMAATDDGREGWVPANYLEMQ 978
+AKKAELA+S+L WTSDPIHKSL DVSGLKGEAKKQFKN+LGYCGDRKYQYPD LIRDI AKGLEMTELRGELYVQAMKQLTKN PAS R WEV+T LL CFPPPK++ENYVHYFVRCN P++TREKFKLAVHMSVYDG K TAPSVKEIPPLLSGFF+REI+ARYNIEEDVVSVKPTR PPSRPGWAAAXXXXXXXXXXXXXXXXXX XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX +PQA+VLYDYDPAGQEGMV VSAGQ+V + ++D+PDWWMA+ D G EGWVPANYLEMQ
Sbjct: 1033 KAKKAELASSFLEWTSDPIHKSLTDVSGLKGEAKKQFKNMLGYCGDRKYQYPDPLIRDIVAKGLEMTELRGELYVQAMKQLTKNANPASVQRYWEVVTMLLTCFPPPKDMENYVHYFVRCNAPEDTREKFKLAVHMSVYDGVKETAPSVKEIPPLLSGFFEREISARYNIEEDVVSVKPTRPPPSRPGWAAAXXXXXXXXXXXXXXXXXXGSSNGGXXXXXXXSAPPAANSTAAXXXXXXXXXXXXXXXXXXXXXXXXGGYGQQAAITNGGGADPAMXXXXXXXXXXXXXXXXPSEPQARVLYDYDPAGQEGMVAVSAGQVVGVTNRDNPDWWMASLDGGVEGWVPANYLEMQ 1385
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA)
HSP 1 Score: 283 bits (723), Expect = 6.340e-75
Identity = 190/325 (58.46%), Postives = 222/325 (68.31%), Query Frame = 1
Query: 1 RAKKAELAASYLLWTSDPIHKSLMDVSGLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSGFFKREITARYNIEEDVVSVKPTRAPPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQAKVLYDYDPAGQEGMVPVSAGQMVSIKSQDSPDWWMAATDDGREGWVPANYLEM 975
+ KA+LA +L T++PIHKSL+ VSGLKGEA KQFKNLLGY GDRKYQYPD L+ +I AKGLE+ LR ELYVQAMKQLT NP P S+ RCWEV+ LLH FPPP+++ENYVH FVR P R+K KLAVHMSV +GAK AP +EIP +L FF R I RYNIE+DVVS P R GW AAXXXXXXXXXXXXXXXX XXXXXXXXXXXXX XXXXXXXXXX P A+ LYDYDPAGQ GM+ + GQ + IK ++ DWWMA T+ G++GWVPA+Y+++
Sbjct: 1145 KKSKADLARGFLSHTTEPIHKSLLRVSGLKGEALKQFKNLLGYAGDRKYQYPDPLLHEIVAKGLEVPTLRSELYVQAMKQLTDNPNPQSEQRCWEVLMLLLHTFPPPEDVENYVHAFVRARAPAGQRDKLKLAVHMSVVEGAKAAAPPEREIPAILGAFFDRAIEPRYNIEQDVVSAAPPPRRAERAGWGAAXXXXXXXXXXXXXXXXYQNGAAAAATPYGAXXXXXXXXXXXXXPLXXXXXXXXXXSA--------------------PTARALYDYDPAGQAGMLALRMGQALVIKDREGADWWMAETE-GQQGWVPASYVQL 1448
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
A0A7S3YT57_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YT57_9EUKA)
HSP 1 Score: 119 bits (298), Expect = 2.360e-23
Identity = 56/157 (35.67%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 10 KAELAASYLLWTSDPIHKSLMDVSGLKG-EAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQET-REKFKLAVHMSVYDGAKGTAPSVKEIPPLLSG 474
+ EL + WT PIH SL+++ G G +A + F+NLLG+ GDR+Y +P+ L+++I +G++ LR EL+ Q +KQ+T+NP S + W M L FPP E ENY ++R N+ E R ++ +H +++ GA+ PS ++ +++G
Sbjct: 1196 REELQRTMFRWTKSPIHASLIELPGRLGKDATRMFRNLLGFMGDRQYNFPELLLKEILEQGIQNPPLRDELFAQIIKQITQNPDNQSSHKGWSAMAVCLESFPPQPEFENYFEVWIRKNIKDEAKRTRYLTLLHQAIFCGARQFPPSEGDMKRIMAG 1352
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
A0A7S2WSL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WSL5_9STRA)
HSP 1 Score: 103 bits (258), Expect = 8.620e-21
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 1
Query: 10 KAELAASYLLWTSDPIHKSLMDVS-------GLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVY-DGAKGTAPSVKEIPPLLSGF 477
K +A L WT+ PIH SL+D L AK FK +LGY GDRKY Y DAL D+ GLE LR E+++Q MKQLT+NP+ SQ + W+++ P P ++E Y+ +++ N P + ++ F A+H Y P+++++P + F
Sbjct: 6 KEGVALKMLRWTNRPIHTSLVDYPKSTKDTVSLVKRAKMIFKAILGYMGDRKYPYTDALACDVLTAGLEEPRLRAEIFIQLMKQLTENPSQDSQAKGWDLLGLCAMTLPLPDDIEFYLSLWLQQNAPAKGQKYFS-AIHALQYGSNTSREKPTLRDVPLMRQEF 168
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
A0A7S4IN46_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IN46_9EUKA)
HSP 1 Score: 109 bits (272), Expect = 2.540e-20
Identity = 52/150 (34.67%), Postives = 86/150 (57.33%), Query Frame = 1
Query: 10 KAELAASYLLWTSDPIHKSLMDVSGL-KGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEI 456
K ++ + W+ PIH L + L + ++ FKN++G+ GDR +P+ L R++ KG++ ELR E+Y+Q +KQ+T NP P+S ++ +++M LHCFPP E ENY+ + R N + A+H V+ G PS ++I
Sbjct: 1275 KDKVKEQMMNWSKHPIHAPLTRIPNLFQKDSVLSFKNIMGFMGDRVMSFPNMLAREVLEKGIQQPELRDEIYIQLIKQVTVNPNPSSTEKGYKMMNMCLHCFPPSTEFENYLEIYFR-NKGDSKSNDLRKALHQIVWSGPVAVPPSPEQI 1423
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
A0A7S0GZ93_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GZ93_9EUKA)
HSP 1 Score: 95.5 bits (236), Expect = 2.230e-16
Identity = 54/153 (35.29%), Postives = 91/153 (59.48%), Query Frame = 1
Query: 19 LAASYLLWTSDPIHKSLMDVSGLKGE-AKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSG 474
LA S L +T+ PIH +L + + A K FKNL+G+ GDR Y+ L ++I +GLE ++R EL++ +KQLT NP+P S++R W+ ++ LLH F PP L+N++ ++ N +E + K ++ ++Y G + + S E ++ G
Sbjct: 218 LAQSMLKFTTYPIHAALTETNAKSNNLAIKLFKNLMGFMGDRTYKNAVLLSQEICKEGLENEDIRDELFLHTIKQLTANPSPKSRERGWQHLSLLLHTF-PPSGLDNFLDKWIMDNA-KERKAKLLHILYATLYTGKRYSPLSDDETKNVMDG 368
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
A0A7S0H1X2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H1X2_9EUKA)
HSP 1 Score: 95.5 bits (236), Expect = 5.450e-16
Identity = 54/153 (35.29%), Postives = 91/153 (59.48%), Query Frame = 1
Query: 19 LAASYLLWTSDPIHKSLMDVSGLKGE-AKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSG 474
LA S L +T+ PIH +L + + A K FKNL+G+ GDR Y+ L ++I +GLE ++R EL++ +KQLT NP+P S++R W+ ++ LLH F PP L+N++ ++ N +E + K ++ ++Y G + + S E ++ G
Sbjct: 2608 LAQSMLKFTTYPIHAALTETNAKSNNLAIKLFKNLMGFMGDRTYKNAVLLSQEICKEGLENEDIRDELFLHTIKQLTANPSPKSRERGWQHLSLLLHTF-PPSGLDNFLDKWIMDNA-KERKAKLLHILYATLYTGKRYSPLSDDETKNVMDG 2758
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
A0A7S2J1Q8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2J1Q8_9EUKA)
HSP 1 Score: 85.1 bits (209), Expect = 5.820e-16
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 94 EAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVR 357
+A QFK+LLG+ G++K YP+ + G L E+YVQ MKQLT NP+ AS D+ W++M L FPPPK LEN+V +F++
Sbjct: 18 QATVQFKSLLGFLGEKKVPYPEEAGEEWLRVGKATPALHAEMYVQLMKQLTANPSEASNDKGWQLMVATLSHFPPPKPLENFVAFFIK 105
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match:
A0A5A8CSV2_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CSV2_CAFRO)
HSP 1 Score: 95.1 bits (235), Expect = 6.630e-16
Identity = 60/168 (35.71%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 10 KAELAASYLLWTSDPIHKSLMDVSG--LKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCN------VPQETREKFKLAVHMSVYDGAKGTAPSVKEI------PPLLS 471
K L A+ L W S I++SL+++ L A + KN+LGYCGD++ +P L +DI KGL+ ELR E+Y+ +KQLT N S+ RCW+++ + FPP E E + F+ + V R + + SV GA PSV+EI PP+L+
Sbjct: 1570 KKRLMANQLTWQSTTINRSLLELPNKPLNKMATRLHKNILGYCGDKQMSFPAMLAQDILQKGLDEAELRDEIYLLVLKQLTGNTVKTSEMRCWQLICMCVGTFPPTHEFEYCLLNFLLSHRESMGTVGNYARYALR-RLEGSVTAGASAFVPSVEEILAYKDRPPILA 1736
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.43e-128 / Id = 77.34 Expect = 1.27e-115 / Id = 73.37 Expect = 6.34e-75 / Id = 58.46 Expect = 2.36e-23 / Id = 35.67 Expect = 8.62e-21 / Id = 35.98 Expect = 2.54e-20 / Id = 34.67 Expect = 2.23e-16 / Id = 35.29 Expect = 5.45e-16 / Id = 35.29 Expect = 5.82e-16 / Id = 45.45 Expect = 6.63e-16 / Id = 35.71 Sequence D7G521_ECTSI A0A6H5KSK5_9PHAE A0A836C908_9STRA A0A7S3YT57_9EUKA A0A7S2WSL5_9STRA A0A7S4IN46_9EUKA A0A7S0GZ93_9EUKA A0A7S0H1X2_9EUKA A0A7S2J1Q8_9EUKA A0A5A8CSV2_CAFRO
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 99.4
Seed ortholog evalue 3.1e-18
Seed eggNOG ortholog 227086.JGI_V11_140911
KEGG ko ko:K10357,ko:K21868
Hectar predicted targeting category other localisation
GOs GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0015629,GO:0016459,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0042623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464
EggNOG free text desc. translation initiation factor activity
EggNOG OGs COG5022@1,KOG0160@2759
Ec32 ortholog description MyTH4 domain
Ec32 ortholog Ec-00_008190.1
COG Functional cat. Z
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko03019,ko03029,ko04131,ko04812
Exons 5
Model size 3353
Cds size 912
Stop 1
Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9614.17315.1
>prot_H-paniculata_contig9614.17315.1 ID=prot_H-paniculata_contig9614.17315.1|Name=mRNA_H-paniculata_contig9614.17315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp
MDVSGLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGEL YVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVP QETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSGFFKREITARYNIEED VVSVKPTRAPPSRPGWAAAAASATAAQASTATAGSSNGTYGSGVYGGGGG GYGGYAAPAAVATTGGFEGGDSGGSTPGVQAMAAPPLPPKPKPPSDPQAK VLYDYDPAGQEGMVPVSAGQMVSIKSQDSPDWWMAATDDGREGWVPANYL EMQ* back to top mRNA from alignment at H-paniculata_contig9614:3123..8587-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9614.17315.1 ID=mRNA_H-paniculata_contig9614.17315.1|Name=mRNA_H-paniculata_contig9614.17315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5465bp|location=Sequence derived from alignment at H-paniculata_contig9614:3123..8587- (Halopteris paniculata Hal_grac_a_UBK monoicous)AGGGCTAAGAAAGCGGAGCTAGCGGCGTCGTACCTACTGTGGACCTCGGA
CCCGATTCACAAATCGTTG ATGGACGTTTCTGGGCTTAAGGGGGAGGCGA
AGAAGCAATTCAAGAATCTTCTTGGATATTGCGGGGATCGCAAATATCAG
TATCCGGATGCGCTCATTCGGGACATTGCGGCGAAAG GTGAGTTGTTGCT
ATTGTTATTTTCCAGTTGTTGTGAAATGTCATCATCCAGTCGTTGTTGGC
CTTGTCGGCTTTGTTGGGGCCCTATGGTGTTAGATCGGAGAGGCGTAATG
CTATGGTTGGTCAGCACACGTTGGTTCCTACGCCTAGGAAGAAGAATGTT
GTAGTGTCGTAGGCATGCATGGGGAACTGGTGATGATGGCGATGACGATG
ATGAGGATGTCAGGATGTCATAATGTAAATTGTGGTCGTCACTGTTATTT
CACACTTTTTGTATCTGTGACCAACCACTGAACCGACCGACCAGGGTTGG
AGATGACCGAGCTGCGAGGAGAGCTGTACGTCCAAGCGATGAAACAGCTC
ACCAAAAATCCCACCCCGGCCTCGCAGGACCGGTGTTGGGAAGTGATGAC
TTTCCTGTTGCACTGCTTTCCTCCTCCGAAG GTCAGTAAATTGCAAATTC
AAACGTGTTGTGTAGTGAAGAGTCATACCTGGTCCTGTGTCATGTTCCAC
TCGTTGTTGCGCGCGATCTGAACATTATTCAGTGTTCGATCTCATCATCT
TTCTGGGGAAGTTTTTGTCACCCTCTCTAAAATTGATGCAAGTTGGAAAC
GGACTTTAAAATACTGTAGAATCGATGTCAATTTTTTTTTATTTTTTATA
ACTGTCATACCATAGGCACAAGTCGTTTGTGCGGTGGGTTAGATTGATTG
GATTGCAACTTCCTGGAGGAGGTGACTCTAAAAGTTAGCTATCGTTGTGT
ACCGACAGCTATCCATTTCTCTTTTTCGACGAGCGCATTGGCTCCGGCGA
GCAAGCTTCATTTGGCCTCATGCTCCACTCGCGCCGTTTTTTTCGCGGCG
ATCATCTGTTCGGGAGATGTTATCTCAGCGTCGCACAGCCCTCTGCCCCA
TCGTTCCACACCAGAGGTGATTCATTCATCATATCCCCCATCTATTGTCT
GCATCGATAGGAAGTATGAATCCGTTCATGCGCCGCCGCCGCCATCCGGT
TGCTGTTGTTGGATGCGCTCTTTCTATGGTTTGTATTTACTTCTTTTTGG
ATGTATAACTGGATGGATCCCGCACGTGAGTGACACCAGCACGAACATGT
CCAAGAAGAAAATGGCAATGTTTTATTTTTGTTTTTCATTTTTGTTTTTT
TGCTTTCTCGCTACGCTCTGTTGTGCTTCAGGAATTGGAGAATTACGTCC
ACTACTTCGTCCGCTGCAATGTACCCCAAGAGACGCGAGAAAAGTTCAAG
CTG GTGAGGGAGAGCAAGCAAATTGAAGAGGCTGTTTTATGTTACTTTCG
TGTGTGTGTGTGTGATCGCGCAACCGTCGTGTCGTCTTTCTTCGTGTTTT
TTTTTTTTTTTTTTTCCCCTTCTCTTTCTTGCCCTCGTCGATTGTCCGAA
GATTTAACTGTTATCTCAATATGTGGCTTTCATAATCAGCATTAGCTAAT
AAAGACGAAGCTCGTTTTAAGACGTACGGGGGGGAGAGCTGAAAAGACCT
TGCTTGCACGGGCACTATTTCGCACACATTCTTTTCCACTTCGCCGTTGT
GGATCTTGGCGTTCTTGCTGCCTCGTACCGTCCACCATGATGATCGCCCG
CCTACCCCAAACCCCAACACAAAACACAGGCTGTACACATGTCGGTGTAC
GACGGGGCGAAAGGAACAGCTCCGAGCGTAAAGGAAATCCCCCCCCTGCT
GTCTGGCTTTTTCAAGAGAGAAATCACCGCGAGGTACAACATAGAGGAGG
ATGTAGTGAGCGTGAAACCGACGCGTGCTCCCCCGTCCCGACCTGGATGG
GCGGCCGCCGCTGCCTCCGCCACCGCTGCGCAAGCGTCCACCGCTACAGC
AGGGAGCTCCAATGGGACCTACGGTAGCGGGGTTTACGGGGGGGGAGGGG
GTGGGTATGGAGGGTATGCTGCCCCTGCCGCCGTCGCAACGACGGGAGGG
TTTGAGGGAGGGGACTCCGGGGGCAGCACCCCCGGCGTGCAGGCCATGGC
CGCGCCGCCACTGCCGCCAAAGCCGAAGCCGCCGTCTGATCCTCAAGCTA
AGGTTTTGTATGATTATGATCCGGCCGGCCAGGAGGGTATGGTGCCTGTG
TCTGCTGGGCAG GTGCGTGTCTGTTTGTGTGTGGTGATGGGTGAGATGAT
GCTGTTCAATCGGACATGTCTAGTATCCTGTTCTTGGCTCTCTCTCTGTG
TGCCTGATTGTGCCGGTTCGGAGAGATTTTGTGCTTCAAGTACGTGTAGC
TATGGTAATGCGTGTCATGTTTCGAGGGAAAGAGTTGCAATATCAATCTC
ATGGTCTTGCCCCCCATCAAGTTTCGGTGTGTTGTATGAAATTGGGTTAT
GTTTGCTGCTGAAGAAAAGTACGCCACACGCAGGTTCGACACATAATCTA
TAGCTTCACTACAGCAGAGTGCATGTAGAGATTTGCCAAATGATAGACAG
GTACTGCATTTTTGGAGTCTTCTATCATGCTCTTTGGTCTCGTACAAACG
GTGCAGTGCGCTAGTGATACCCCTCCTGCTTCCCCCCCTCCGGCTCCATC
GTCCCGATAAACTCTTTAATCAACGGCTAATTACTATGGCATGCACAACA
TGGGTACGCCCTCCCCACCCCCTCTCTATCATGCTTTGTTCCACTGCCTT
ATAGGATATGCAAGCGTTGAATTCTCACATATTTTCGAGGACTCGCTACC
GAAGTGACATTTCGCACCCGTGTACACTCTCCGCGCTATTGGTTGTTGTG
ACACCATGCTAAATTGTAACACTGAAACACTCCACATGCAGATGGTGAGC
ATCAAAAGTCAGGACAGTCCTGATTGGTGGATGGCCGCCACTGACGACGG
ACGGGAAGGATGGGTACCTGCCAACTATCTCGAAATGCAGTGA TATTTTG
GAACCCGTGCGATGCGATTATTATTTCAACTTTCGGTTTCTCAATGCTGG
TGAGGTGTTGGAAGCGATGCGACGGTGAGAGTGGAGATTGGGGGGGGAAG
TTGATGTGTGTTCTGGACTTCTTTTTTTTTTTTTTTTTTAATTTGTGCCT
TTTTCAATCCACTTGAGGTCTTGGCAGGATTCGAGTATGATTGGAATTAT
TTTCCGGGTGCAAGGCGTCATGGGTATGAAGGAGTTACCGTCTTCCCTAC
CCCTGGGGTCACTTGTTGGTGCTCAGGTGTTTTCCCTCGTAAAGGAGGTA
CCAGGAGGTGTATACTTTCTTGGAGATTGAGGTGGTAAGGCGAGCTTTAC
CACATACTTGTGTGCGTCTTTTATCACTCTTGATGAGGTGTTCATACTCC
GGTCTTTTGGGGGGATTCGCCTAGGGTGTCTCTCAGTTATTGATTGAGTA
GCAATTGTTTCCCGTGTGTTGTTTTTGATGGGAAGTCGAGAGCCTGAAAG
CACAAATATCTCTACCGTGGTGCCGCTTATGGCGGTGTTCGTCGACCCCG
TATCTATGAGTCGGGTGTGTAACGCGTTTCTCTTGTCTCGAGTAGCCATT
TCGGTCGTGTGTTCACCAGGGGGACAGATTTGTCGTGACAACATGTTGTT
GTTATAGACACGTTCTCGGAACATATCTCGGGCTTCTTGCTGTTAACCCT
GGCTAGAGAAAACCAGTGTTGTGATGATTTATCAACATTGTTTTTAATTG
TTCTAAGAAAGGTGGTGTTGTCGTTTCGGTGAAAACGTAGTTTATAAGGA
CTACGAACTAAACGCGCGGTTGTTATGTATAAGATATTTGAGTGTTTCCT
TGTTAGTCGTGTTGCCCCGTGTTGAGTTTTTTTTTTTCGTTATTTGTACC
GTGCGTTGTATGATACACAGCACAGTAAATGTGTGAATTTATGATATAGC
CAGTCGTTCTTGTTGGGCCAGGGTGGTTGTCTTCGTGACTGTGGAGGCGA
GAGCGAGGGAAAAACAGTGGAAAACGGGGTCAGGGGGTGGGGGTTATTTG
CGCTGTGATGAACGGGACTTGGAGGTGTGGGTTGCGAGCCTACGCGACGT
GCATGGTATAGCATACCGTACTGGTAGGATGTTCCTCTCAAGGCTGTTGC
GTGATGAGTGATGCGTAGTGCACAATTGCAGCTCTGCGGTGAACAACGTA
ACTTGCGGCTCGGCTCTTGCCCTTTGGACTACTACACTGGCTTGTGTACT
CGATAGGGGGCCAAGGATTTTGATCCTCTGCTTGGATGGAGGACAAGAGG
AACCGCATGGCGTTTTCGCCGATGTTGTATGACTAGGAAAAGTGTTCTGA
ACAGAGTGGCCGAACGGCGATATTGTCATGGTGGTCCGGGTAGATGGCTG
TTGGCCTGTTGGTGATGTGTATGAACGGTCGATTCTTCATAGTCCTAGCT
CTAGCTGTACTGTTGACCTGTCAAGATCACCTATTGCTTTCCAACTTGCG
TCGCCCTTTTTTTCTTGTCCTTAATTAAGTCACTGTGCGTAGTTCTTCCT
CCTGCAGATTGACTAGAGATCCGTTGTCATTATTTGCCAAGGGCGCCGTT
AAACGATGAAAGAGAACTAGTCTGAGTTCATTCATTTCCCGTCCCTGGGC
CACAGCTCGCTTGTTATCATGCATCCGATCCTCTTCTTTCCGTTTCACTT
CATGGCTATGAGCCAACTCACTGTACAACAAAAACGAGACTCTTTCGGGG
TGGATAGCGGGGTCCAACGGTCCCCGCTCTACATTTTGTCATGTGCGTTG
TTTGGTGTCCTCTGTGGGTGTTCATTGTGTTTGGGCGGGTGGATGCCCGT
ACATGCTGTCGTAGGTAACCATTGTTGCCAAGTTCGTTTCTTCGCGAACA
AAAATATTCTTTGCCTTGACGTCTGCACCAGACGCTTGTTTCTGGAGCGA
TATCATTGGTGGTCTGGGTATTCTATAGCACCACAAGTACGTGTTGGGTT
TTCTATAGCTCCCCCGGTTTTTGTCTCTCGCGATAGAGACACATGTTACA
GTTGCGGCCACGTCGTTTGGTGGGTTAATTCCGTGACCGACTTTGATTCC
CCCAAAGCTGATTGGACAACACGCTAGCGCGTAGTCCCATGTGTTTCTTC
AAGACATTATTTTGATCTCTACGCATAACAGTAGGTCCCGTTGGTTGCTA
AGTACAGGGTTCACAATTACAACCGGGTACCAGTGGGGAGCAGAAAAATG
GCAATCTCCCGAAAATTTATCGAGCCCAGAACACGCGCTCTCGGCCAAAA
GAACACATCAACCGTTTTGTCCATGTATTCGTCCATCAAGTGTTCATGGT
TGCGTGCAGAAAGTG back to top Coding sequence (CDS) from alignment at H-paniculata_contig9614:3123..8587-
>mRNA_H-paniculata_contig9614.17315.1 ID=mRNA_H-paniculata_contig9614.17315.1|Name=mRNA_H-paniculata_contig9614.17315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at H-paniculata_contig9614:3123..8587- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGGACGTTTCTGGGCTTAAGGGGGAGGCGAAGAAGCAATTCAAGAATCT TCTTGGATATTGCGGGGATCGCAAATATCAGTATCCGGATGCGCTCATTC GGGACATTGCGGCGAAAGATGGACGTTTCTGGGCTTAAGGGGGAGGCGAA GAAGCAATTCAAGAATCTTCTTGGATATTGCGGGGATCGCAAATATCAGT ATCCGGATGCGCTCATTCGGGACATTGCGGCGAAAGGGTTGGAGATGACC GAGCTGCGAGGAGAGCTGTACGTCCAAGCGATGAAACAGCTCACCAAAAA TCCCACCCCGGCCTCGCAGGACCGGTGTTGGGAAGTGATGACTTTCCTGT TGCACTGCTTTCCTCCTCCGAAGGGTTGGAGATGACCGAGCTGCGAGGAG AGCTGTACGTCCAAGCGATGAAACAGCTCACCAAAAATCCCACCCCGGCC TCGCAGGACCGGTGTTGGGAAGTGATGACTTTCCTGTTGCACTGCTTTCC TCCTCCGAAGGAATTGGAGAATTACGTCCACTACTTCGTCCGCTGCAATG TACCCCAAGAGACGCGAGAAAAGTTCAAGCTGGAATTGGAGAATTACGTC CACTACTTCGTCCGCTGCAATGTACCCCAAGAGACGCGAGAAAAGTTCAA GCTGGCTGTACACATGTCGGTGTACGACGGGGCGAAAGGAACAGCTCCGA GCGTAAAGGAAATCCCCCCCCTGCTGTCTGGCTTTTTCAAGAGAGAAATC ACCGCGAGGTACAACATAGAGGAGGATGTAGTGAGCGTGAAACCGACGCG TGCTCCCCCGTCCCGACCTGGATGGGCGGCCGCCGCTGCCTCCGCCACCG CTGCGCAAGCGTCCACCGCTACAGCAGGGAGCTCCAATGGGACCTACGGT AGCGGGGTTTACGGGGGGGGAGGGGGTGGGTATGGAGGGTATGCTGCCCC TGCCGCCGTCGCAACGACGGGAGGGTTTGAGGGAGGGGACTCCGGGGGCA GCACCCCCGGCGTGCAGGCCATGGCCGCGCCGCCACTGCCGCCAAAGCCG AAGCCGCCGTCTGATCCTCAAGCTAAGGTTTTGTATGATTATGATCCGGC CGGCCAGGAGGGTATGGTGCCTGTGTCTGCTGGGCAGGCTGTACACATGT CGGTGTACGACGGGGCGAAAGGAACAGCTCCGAGCGTAAAGGAAATCCCC CCCCTGCTGTCTGGCTTTTTCAAGAGAGAAATCACCGCGAGGTACAACAT AGAGGAGGATGTAGTGAGCGTGAAACCGACGCGTGCTCCCCCGTCCCGAC CTGGATGGGCGGCCGCCGCTGCCTCCGCCACCGCTGCGCAAGCGTCCACC GCTACAGCAGGGAGCTCCAATGGGACCTACGGTAGCGGGGTTTACGGGGG GGGAGGGGGTGGGTATGGAGGGTATGCTGCCCCTGCCGCCGTCGCAACGA CGGGAGGGTTTGAGGGAGGGGACTCCGGGGGCAGCACCCCCGGCGTGCAG GCCATGGCCGCGCCGCCACTGCCGCCAAAGCCGAAGCCGCCGTCTGATCC TCAAGCTAAGGTTTTGTATGATTATGATCCGGCCGGCCAGGAGGGTATGG TGCCTGTGTCTGCTGGGCAGATGGTGAGCATCAAAAGTCAGGACAGTCCT GATTGGTGGATGGCCGCCACTGACGACGGACGGGAAGGATGGGTACCTGC CAACTATCTCGAAATGCAGTGAATGGTGAGCATCAAAAGTCAGGACAGTC CTGATTGGTGGATGGCCGCCACTGACGACGGACGGGAAGGATGGGTACCT GCCAACTATCTCGAAATGCAGTGA back to top