mRNA_H-paniculata_contig961.17310.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig961.17310.1

>prot_H-paniculata_contig961.17310.1 ID=prot_H-paniculata_contig961.17310.1|Name=mRNA_H-paniculata_contig961.17310.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
MTAPVVTGPPSLETGAKISMTAPVVTQTSGAPGSDAKIMQFIMPQKFKSI
SDLPTPTDSRVTLREVPELSYLVWQFTGNMGKDVNAAAESVRLLAEEAVK
KDNGGAFAEYVGPDAKFLVARYNPPWTVPFLKTNELWFPLPLSREEIEAK
LPSA*
back to top

mRNA from alignment at H-paniculata_contig961:488..5795+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig961.17310.1 ID=mRNA_H-paniculata_contig961.17310.1|Name=mRNA_H-paniculata_contig961.17310.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5308bp|location=Sequence derived from alignment at H-paniculata_contig961:488..5795+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTACATCGGTGTCTTCGGAGATCCTGCCAACAAGATTGCAGGAGGCGAA TCCGGAGAGCAAATATCGATGACCGCACCTGTCGTGACTGGACCTCCTTC GTTGGAAACCGGTGAGACTTACGTGTTGGTATCGTCGTAACACATACACT GTGAAATTTAACCCTTTCGGAACATGGTCATCTGAAACCTTCAGTTGGAA TTTTCTCTTCGTGCGATGTAAAATAGGTTAAAGCAGGCCTCGAGACGCAA CCCGTGCGAGATAGACACTTTTTTTGCGCACTCAAATCTGCTTTCAGGCA TTCATTCTGAACGCTCCAACAAAAACTCGTGTTTGTCAACACGAATCAGA TGTACTTGCAAATCTTCTTAGAGACGATGTTCCAATTAGTATCGTGTCCC GAAGGGGTTGAAAGGTACTTCTGATATTCTTGTGTAATTGTTTTTCAACA CCGTGCGCAGACTCGGGTATGGCATGGTGCAACCGTGGAAAAAACAAACT AATTTTACGATCACATGTAACTTTTTTTTTTTCTTTTTTTTGACATAATC GCGCGTCGTTCGTCACAGATTACAGTCGCGCGTTAGATAATATAGGTGGT TTGTCGTCCCATTCACCTCAATATCAACTCTACATAGCTCCACAATTAAA CCTCATTTTTTTTTTTTTTTTTTGTCATGACGTTGAGAAATATAGGAGCC AAGATTAGTATGACGGCTCCAGTGGTGACTCAGACCTCTGGCGCTCCTGG ATCCGATGCGAAGATAATGCAGTTCATCATGCCGCAGAAGTTCAAAAGCA TCAGGTATGGTGCATGTCTTGTTATGTCCTACTCTTGTGTGATCCTAGGG TTTTCGGTTGTTAGTGCTTGTTTCGTTTTTGTCAAATCCCAGGTTAAAAG GTTGTGATAACATTGGCGTTGACCAGCGATGTACGTATATATATATATAT ATATATATATATATTTGCGAAGCAAGAGATGAACCGTCGTTTGATTTTTT TTTTTTTCGTGCGAGTCTGATGAATAACCGAAGTTGTACTGTTCACTCCG CCTTTTTGTTTGTTCATTGTTTTCGCTATATTAATAAAGACTTTGTGAGA GTTACACTTGAATCAGTAATCAGACAGCTGACCATGCGGCCAAGTTGCCC TTTGCACTATTGAACCGCTTCATCAACCCCCCTCGCCTAGTTATTACTAT GTCGTCCACTTAAATTGATCTAGCGTAGGATTATTGTACATCAAATAACT CCCCCTCCCCACCCTTTTCGAGGGTGCGCGGTCAATGGCCCAGCAATTAC AGCACAGCATCTAAAACAGTAGTACCCCCCCCCCTGCCGCCGCCGCCGGA TCCCGCGCCCCGATTCAACAGCGATTTACCCACACCGACAGACAGCAGAG TAACGCTGCGCGAGGTGCCGGAGCTCAGCTATCTGGTGTGGCAGTTCACT GGCAACATGGGGAAGGACGTTAATGCTGCAGCCGAGAGTGTGCGTCTGCT AGCCGAAGAGGCTGTCAAGAAGGACAACGGGGGGGCCTTTGCTGAGTACG TCGGACCTGACGCAAAGTTCTTGGTTGCCAGGTGTGTGTGTGTGTGCGCG CGCGTGCCATGTGAGAAATGCAGGAAATCTGTATTTTGCTGGATAACTTT TTTCACATTTCTAATCACAAACCAGACGGTGATAACTCCTCAGCGAAAAA AATCGTGACTACTAGTAGGGGGCGAGTCCGTTAAGCTGAAGTAGGGGTCG ATCCTCTGTAGCACACGGCATTATGCATGTATGCACATCGTTTAACAGCG CAAAACATAAATCAGACCGGAGAAAAATTGAGGCTTCGTTCCGCTCTATC AAGGCGAGGAGGGTTGGAAGGAGTCGTTTCTAGTCGTCGGGAGGATATCC ATCGGTGCCAGATTAGTGGAAATATAGCTCAACATCATCGTTCAATGTCT GATGAGAGAGAATTAAAATTTTAAGTTAGCCTACCTGCAAGTATCGTCTT TAGAACCGGTTTTACGGTTTTGCGGGCTCACCTGGGCGTGGTGTAGTCGA TGCGTTGTTTTGCAGATCAATTGGCAGCAGCGGGCACACATGCGCGGGTA TATGCCATATTTTAAAAGTTTATACGGATCAGGAGGGACCAAAGGACTGC TAACGCTAGCGGTTGCTGGCTATCCCCGATGATCAAGTTACTAAAGTGAT CAAAAGTCGTAAGGAGGGGTAGACTGAGAGTATGTGAATGTAGGCTCTAA CAGGCGAACGTTGGAGCCGGTATTTACTGGCAGTGTGTTTATTGTACACC GGGTAAAAATTGGCACACGATGAAAAGTGTGATGGAGTGGAGCTTGAAAA AACCCAAGCAAACGCGGTTCAGCTAACCAACGTCTGATGGATCAAAATTG CCCGTCAACGTGCAAGTACTGGTCTTCTCCTGCGGGTAGTACGAAGCAAA CCAATCCATTTCGTCGTTGGCTCTTACAGTTGTCATTCACCTACAAGTAG TCCTCTCATCTACCTACTTGTGCCGGAATTTTCACCTGTACTGTCGGAGG TACCGCTGTACAGAAATTGTGTGTGTGTGTGTGTGTGTGCTTTTTCCCTA GAGCATCTGGAGACTCGGAAAAAAGATGGTAGAGGGGAAAACGGTCATTT ATCTGCAATGACTTGCAATTGTTGGGTGTCCGTGGTATCAAGCGGTCTGT CATGTCCTTCGACTAGATGACCAAAAAAGGGTACTATTTCTCTCTTTAAA AGGGGTGGTATCTATCGTACGTGTATCCGAAATTTCCATGTTACCCTTCG GATCCATATGAAATAATGGGCTGTGTGGTGGTTGTTTCGGAATGGAAACG AATTTCCGCACTTTGTCCAAGTATTTTTGCGAGTGGGTTTTTACCATTTA TTTTTTATAATACATGGACATATTTTTCTTGCTTTCTTGAGAGTCTGGAG GAAACCTGAACCCAACGCTCAGCCCCGGAACCGGGCTCGTGTGCCAGTTA CTCCAAGACCGGGCTAGCCCGTCTTGCGACGGTTATGTGAGATAAGGCAC CCTGAACGCTAGCATGACTTTGCTCAGGGTAATGTGAGACCTGCACCCCC TAAACTCCCCATACTTGTGGCTTCGATCTTACAAGTGTGGAACATACATG CGAAGTATCATTAAAATATATATATAAATATATATTATAAGCACAAAAAT CCCCAACGGTTTGTTTACTGCGTATCAATCAACTCCAAAAACCTCGTGGG CATCAAAACGCTTGATTCCTAAGTTGATACTCGACCAGTCTGCGATGCAT GTACTCTCTGAACTGTTTTTGCAAGGTTGACGAAATTTGCTTGTCCACGC GCCGTATCTTCTGGCGCATGCGCCAGACGTGTATTTTGCTCAAATCCGTG TCCACTGGCGACCTGATTCGAGTCCTGCCAACGCACATTATGCCTCGAGG GGGTGGGGGATTAGGGTTGTGGCCATGGTTACCGTCAGTTGAGGGGTTAG TTCTGCTCGCGCCAGAGCAACCCAGAGCGTGGACCATAAAAACTGAAGAC CTGGTATCGACGGTTGTTTTTGGCTTCGTGGGTGAAAAGGCCTCGCCGAA CATGCGAGGGTGAGGTTTTCAACCCGAATCGGGTCCGTACACATGAAATG AAAGTTGGCCGCATAGCCTCCTTCTTCTCCATCTCAACGACCTCCAATGC TATCGGGAATCGCGCTGATAGCCACAAAGCTCTGTCTTCCTGAGAACGCG TAGTAAATAAACGGTCTATCAACTGCGGCAGCACGCCAAGCATCATGAGT ACCCCTCCCTTACGGATTGCACATGTAGTGCAGTCATAATATGAGGTCCA GAGAGATAGTTCAACTGATGAGTACCTCTTCCCCCCTCGATGTGAATGTT GACAGGTATAATCCCCCCTGGACTGTCCCTTTCCTGAAGACTAACGAGCT TTGGTTCCCTCTGCCGCTTTCAAGGGAGGAAATCGAGGCAAAGCTGCCCA GCGCGTGAACCAAGTGCATTTCAGGATAAAAGAAGCTCGTGTTTTTTTTT TGTTTTTGTTTTCTCGAGATGCCCACGTGCTCGTGTTTATTAACGTTAGA TACATTCATTATTTTGACCTCGGCATGAAGCAGATAGATAGACGTACCCA CGTACATACGGTAGGGGGGACATGCAGCTTTGCGTATTTTCTCGCTTTTG TCTCGTTCGGGGGTAGAGGGGGAATCGGGAGGACTTGTAATGTTTGGCAG GCCTTGCAAAAGCTCTAGGGCGATTGACCGGGCTTCATTTGTCCTCAGGA GGACGGAGTCAAGGAGCCCTTGGCGGAGGGAGAAGGAGGGAGGAGTTTTC ACATTTTGCATGCTGTAGTTGGTGAGTGATTTGACCACCAGGCCTCCTGG GGAAGAGGAGGGGAGGTCAAGGGGGAAGAAATGTTTATTGGACGTATATG TTGAGGCTGTGCGGCCCAACTGAAGCCAAAGCTACGTACACAGAGCTACG AGCAGAATCATCACGAATACGGGGAAGAAATTCGTAGGCGTTATGAGAAA GAGGCTTGCGCTTTGACTGTGTATTATATCTGTGAACAGGAGGGGGGCGG CGGTCAGGCTTGGCAACGTTGAACGTTGGGCAAACAAACGCGTCTGTCTC TGGAGTAGGAAATATTTTAACAACGTGTGCCTGTGGTGTTGGTTGCCTGG AGAGTGCCGTTTTGAGCACTTGCAGCCTCGATACCTGACCCTTAGTGTAC ATATAATATGATTCCCCCCCCCCGTGTATACATAATGTATACGTCCTTGT GTGTCATGCCTTGGTGACAAATGATGGTGTGCTAATTTCGGGACAATATT TCGCTGTTGAGGTTTTTTTGAGTCGTTTTTTTTTTTTTTTTTTGATAGTG GTCACTCTCAGGGCTGCATGTGCGCGCTGGCTGTACGACATGGCCATGCA TTTATTTCTCAGCACGTATGGCAACTGGTTTGGAAATGGACGTGGTACTG ATCGGAGGCAGGGATGGAACATGACCAAACTGGGGTGAACTCTGGCGTGA TCCACCTACTAATCATTACCATGCGTTCTGTGGTCGAAGTGACGGGAGTT CAATTTTTGGGACAAATAAGCTTTCTTGTCGACAAATAACACATGAGTAC GAGAAAACTGGCATCGAAGGGAGAATGCTCGTCAGATTACATTGCCGTCA ATTCCACGGTTAAGACGAGAGAGGTAATTGCTCCCCCGCCCCCCCACCGC GGTATAATACGAGGGACGAACGAAGACATTACTAGCACTTCCAGCTGTGT GACCGATC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig961:488..5795+

>mRNA_H-paniculata_contig961.17310.1 ID=mRNA_H-paniculata_contig961.17310.1|Name=mRNA_H-paniculata_contig961.17310.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at H-paniculata_contig961:488..5795+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACCGCACCTGTCGTGACTGGACCTCCTTCGTTGGAAACCGATGACCG
CACCTGTCGTGACTGGACCTCCTTCGTTGGAAACCGGAGCCAAGATTAGT
ATGACGGCTCCAGTGGTGACTCAGACCTCTGGCGCTCCTGGATCCGATGC
GAAGATAATGCAGTTCATCATGCCGCAGAAGTTCAAAAGCATCAGGAGCC
AAGATTAGTATGACGGCTCCAGTGGTGACTCAGACCTCTGGCGCTCCTGG
ATCCGATGCGAAGATAATGCAGTTCATCATGCCGCAGAAGTTCAAAAGCA
TCAGCGATTTACCCACACCGACAGACAGCAGAGTAACGCTGCGCGAGGTG
CCGGAGCTCAGCTATCTGGTGTGGCAGTTCACTGGCAACATGGGGAAGGA
CGTTAATGCTGCAGCCGAGAGTGTGCGTCTGCTAGCCGAAGAGGCTGTCA
AGAAGGACAACGGGGGGGCCTTTGCTGAGTACGTCGGACCTGACGCAAAG
TTCTTGGTTGCCAGCGATTTACCCACACCGACAGACAGCAGAGTAACGCT
GCGCGAGGTGCCGGAGCTCAGCTATCTGGTGTGGCAGTTCACTGGCAACA
TGGGGAAGGACGTTAATGCTGCAGCCGAGAGTGTGCGTCTGCTAGCCGAA
GAGGCTGTCAAGAAGGACAACGGGGGGGCCTTTGCTGAGTACGTCGGACC
TGACGCAAAGTTCTTGGTTGCCAGGTATAATCCCCCCTGGACTGTCCCTT
TCCTGAAGACTAACGAGCTTTGGTTCCCTCTGCCGCTTTCAAGGGAGGAA
ATCGAGGCAAAGCTGCCCAGCGCGTGAGTATAATCCCCCCTGGACTGTCC
CTTTCCTGAAGACTAACGAGCTTTGGTTCCCTCTGCCGCTTTCAAGGGAG
GAAATCGAGGCAAAGCTGCCCAGCGCGTGA
back to top