prot_H-paniculata_contig9600.17307.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9600.17307.1
Unique Nameprot_H-paniculata_contig9600.17307.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
BLAST of mRNA_H-paniculata_contig9600.17307.1 vs. uniprot
Match: A0A2G8KJ37_STIJA (DEAD domain-containing protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KJ37_STIJA)

HSP 1 Score: 56.6 bits (135), Expect = 5.950e-7
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   43 SGQGSHVDPAKDTDVEKQLESHQLKLSFYGVPEQLVDSYKKRGVEQLFPWQAHCLRVDNCKPCAGGNLVY 112
            +GQ S + P   +  E       L LS +G+PE +++ Y   GV+ +FPWQA CLR   CK   GGNL+Y
Sbjct:  285 NGQRSPISPPPTSTQEC------LSLSSWGLPEAVLNQYYLMGVQNMFPWQAQCLR--KCKVLQGGNLIY 346          
BLAST of mRNA_H-paniculata_contig9600.17307.1 vs. uniprot
Match: A0A5E4M187_9HEMI (DNA-directed DNA polymerase, family A, palm domain,Helicase, C-terminal,Ribonuclease H-like n=2 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4M187_9HEMI)

HSP 1 Score: 53.5 bits (127), Expect = 8.030e-6
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 0
Query:   68 LSFYGVPEQLVDSYKKRGVEQLFPWQAHCLRVDNCKPCAGGNLVY 112
            L  +G+P Q+VD+YKKRG+  +FPWQ  CL  D      G NLVY
Sbjct:    8 LDSWGLPPQIVDNYKKRGIVSMFPWQVECLTCDGVLD--GQNLVY 50          
BLAST of mRNA_H-paniculata_contig9600.17307.1 vs. uniprot
Match: J9M4Q5_ACYPI (Uncharacterized protein n=13 Tax=Aphidinae TaxID=133076 RepID=J9M4Q5_ACYPI)

HSP 1 Score: 52.0 bits (123), Expect = 2.780e-5
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0
Query:   68 LSFYGVPEQLVDSYKKRGVEQLFPWQAHCLRVDNCKPCAGGNLVY 112
            +  +G+P+Q+V++YKKRG+  +FPWQ  CL  D      G NLVY
Sbjct:    8 IDSWGLPDQIVENYKKRGIVSMFPWQVECLTSDGVLD--GRNLVY 50          
BLAST of mRNA_H-paniculata_contig9600.17307.1 vs. uniprot
Match: UPI0007637EF3 (DNA polymerase theta n=1 Tax=Diuraphis noxia TaxID=143948 RepID=UPI0007637EF3)

HSP 1 Score: 50.8 bits (120), Expect = 7.120e-5
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 0
Query:   68 LSFYGVPEQLVDSYKKRGVEQLFPWQAHCLRVDNCKPCAGGNLVY 112
            +  +G+P+Q+V++YK+RG+  +FPWQ  CL  D      G NLVY
Sbjct:    8 IDSWGLPDQIVENYKRRGIVSMFPWQVECLTSDGVLD--GRNLVY 50          
BLAST of mRNA_H-paniculata_contig9600.17307.1 vs. uniprot
Match: UPI000673F895 (LOW QUALITY PROTEIN: DNA polymerase theta-like n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=UPI000673F895)

HSP 1 Score: 50.8 bits (120), Expect = 7.130e-5
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0
Query:   68 LSFYGVPEQLVDSYKKRGVEQLFPWQAHCLRVDNCKPCAGGNLVY 112
            LS +G+PE ++D YKK+G+  +F WQA CL   N     G NLVY
Sbjct:  250 LSSWGLPEPVLDVYKKQGISTMFEWQAECLLTGNA--LGGDNLVY 292          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9600.17307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2G8KJ37_STIJA5.950e-741.43DEAD domain-containing protein n=1 Tax=Stichopus j... [more]
A0A5E4M187_9HEMI8.030e-651.11DNA-directed DNA polymerase, family A, palm domain... [more]
J9M4Q5_ACYPI2.780e-546.67Uncharacterized protein n=13 Tax=Aphidinae TaxID=1... [more]
UPI0007637EF37.120e-544.44DNA polymerase theta n=1 Tax=Diuraphis noxia TaxID... [more]
UPI000673F8957.130e-548.89LOW QUALITY PROTEIN: DNA polymerase theta-like n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9600contigH-paniculata_contig9600:5991..6906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9600.17307.1mRNA_H-paniculata_contig9600.17307.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9600 5991..6906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9600.17307.1 ID=prot_H-paniculata_contig9600.17307.1|Name=mRNA_H-paniculata_contig9600.17307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
YISLKGLKLEGADAYKAFEEDKAKLRSNGGRRVMDGSTILRGSGQGSHVD
PAKDTDVEKQLESHQLKLSFYGVPEQLVDSYKKRGVEQLFPWQAHCLRVD
NCKPCAGGNLVYRYV*
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