mRNA_H-paniculata_contig9600.17305.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9600.17305.1

>prot_H-paniculata_contig9600.17305.1 ID=prot_H-paniculata_contig9600.17305.1|Name=mRNA_H-paniculata_contig9600.17305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=421bp
MDQPSDLKGFFPTTKKIKWTQPRTAQGRRVGASNAQHNVPLAGVVPSKKC
KPDHPHAGNVVKATQPPCNNQHWTHCFSRPSGLSKTRQRSTTTLNPVSKS
STSKASSLYLMPRQSAELTGSRNCPTRDGGTSLKPAIKLARAGNTATAAA
RVPIIVVPETPHRHNHHCKSTFRSRACDPTVTADFVVPETQPGVETSVID
VFSAKGQLSGGGLESTEDSDRSKSSDLLCGSRMSSIAESGEPKISADAYE
YSRPISSRKRPRQEQNVPHLQHPYINRVDLRQPDRYSPPRPGGRTNPPLF
HHQSTQIRKETYLRPDEATQRVDDQPGAQKATKRDGFCPSKGAQATEAAA
NNFPKCSSWSLGRMDHEARVAERDRVIERHPPVHRLLSAVASVGQARNHQ
DRSLENDITRLDVTPSFTSG*
back to top

mRNA from alignment at H-paniculata_contig9600:2630..4719+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9600.17305.1 ID=mRNA_H-paniculata_contig9600.17305.1|Name=mRNA_H-paniculata_contig9600.17305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2090bp|location=Sequence derived from alignment at H-paniculata_contig9600:2630..4719+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGAAAACATAATGGTATACACTCGGTCGGTGGTATCTGGGAATGAGCT GTATTCACGGTTACTAGAGGCGTGAGTGGATTAGTGGGTACGCAACATTG GAAGGCGAACGCTGAGGGCTGATCTGTTTATTGGAGAAATTCTGAGGAAT TTGAACTCGAGGTAAACTGTCGTTCTGCTAATTCGGACAGGGACCCACGA GAGAGAAGGCAGTAGTACCTGTCACCTTGTGGAGTCGATTTAACGTCTTT GTGACTCGGCGTATTCGTTAATAACATCTGCGTAGTACTTAGGTGGGTAG TTCGGTATTAAAACCTAGTGTTGGCGACTAGTTGTCCAGCAGCACTCGCA CACGTACGGCGTATGCTGTTGCTTTGCCGCACCGCCGAGAATAAGAAATG GACCAACCGTCGGACTTGAAAGGATTTTTTCCAACGACCAAGAAGATCAA GTGGACACAACCGCGTACAGCGCAAGGGCGCAGGGTTGGAGCCTCTAATG CACAGCATAATGTACCATTAGCAGGTGTTGTGCCCTCGAAAAAATGCAAA CCTGACCATCCGCACGCTGGAAATGTGGTGAAAGCCACCCAACCCCCGTG CAATAATCAGCACTGGACGCATTGCTTTTCGCGTCCGTCGGGTCTGTCGA AGACACGGCAGCGGTCGACTACAACACTGAACCCTGTCTCGAAGTCGAGC ACCAGCAAGGCGAGCAGTCTGTATCTTATGCCACGACAGAGCGCTGAGCT CACTGGTTCTAGAAACTGCCCCACTCGAGACGGCGGCACCTCATTGAAAC CCGCGATAAAGCTTGCCCGCGCTGGCAACACCGCCACAGCAGCTGCTCGC GTGCCGATAATCGTAGTTCCAGAGACTCCACATAGGCACAACCATCACTG CAAGTCCACGTTTCGCAGTAGAGCTTGCGATCCGACGGTAACAGCCGACT TTGTAGTACCAGAGACGCAACCTGGGGTGGAAACGTCTGTGATCGACGTG TTCTCTGCAAAAGGGCAATTGTCGGGAGGAGGATTGGAAAGTACGGAAGA CAGTGACCGCTCCAAGTCGTCGGATCTGCTTTGCGGCAGTCGCATGAGCT CGATAGCGGAGTCAGGGGAGCCAAAGATATCAGCTGACGCTTATGAATAC AGCAGACCTATATCTTCGAGAAAGCGTCCGCGGCAGGAGCAGAACGTGCC GCATCTCCAGCATCCTTACATCAATCGTGTGGATTTGCGACAACCCGACC GATACTCTCCACCCCGACCAGGGGGGCGAACGAACCCTCCTCTCTTTCAC CACCAAAGTACACAAATAAGGAAAGAGACCTACTTGCGTCCAGATGAGGC GACCCAACGGGTCGATGATCAACCAGGGGCGCAGAAGGCCACGAAAAGGG ACGGTTTCTGCCCAAGCAAAGGAGCTCAAGCGACTGAAGCGGCAGCCAAT AATTTCCCGAAATGTAGCTCATGGTCACTTGGACGAATGGATCACGAGGC CAGGGTTGCAGAGCGAGACCGTGTCATTGAGCGACACCCACCGGTCCATC GTCTGTTGTCCGCCGTAGCAAGTGTTGGGCAAGCGAGGAATCATCAGGAC CGTTCCCTTGAGAACGACATCACACGGTTGGATGTCACCCCCAGCTTCAC AGTCGATTCAAATGCTCATGCTAGCGCACGAAGTAGGTTGAAGGCGGGGG CCACAGAAACATCAGACGGGGGCCGCATGACACGTGGACAAGTAACCACA TATCGGGCGGTCGCAGCAAGTCGGGTTGACAGAAATTCGAAGCCTGGGTT AGCGCGGCTGCATGTCTCATCGTCTGATCAGCTTCGCCCGTACACCGCCA GCTCGTCGATGACCCGTGACAAAAGCTCACCAATGGTACCAAGTCTCTCG AAAACCGTAGACTGTCTTCACACAAATGGGGCCACAGCTTCGGCACAGCG AACAGAGCCATCAAGTATTTGTCAATCTCTTTCGGCTGCACCCGTCATGC GACCGACGGCAGTCACCGTGTTGACGAACACGTCAAACTATTCGGTTTCC ACAGCGCTAGAACACCCACGGAGTACCCAGAGACTGTCGT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig9600:2630..4719+

>mRNA_H-paniculata_contig9600.17305.1 ID=mRNA_H-paniculata_contig9600.17305.1|Name=mRNA_H-paniculata_contig9600.17305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at H-paniculata_contig9600:2630..4719+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACCAACCGTCGGACTTGAAAGGATTTTTTCCAACGACCAAGAAGAT
CAAGTGGACACAACCGCGTACAGCGCAAGGGCGCAGGGTTGGAGCCTCTA
ATGCACAGCATAATGTACCATTAGCAGGTGTTGTGCCCTCGAAAAAATGC
AAACCTGACCATCCGCACGCTGGAAATGTGGTGAAAGCCACCCAACCCCC
GTGCAATAATCAGCACTGGACGCATTGCTTTTCGCGTCCGTCGGGTCTGT
CGAAGACACGGCAGCGGTCGACTACAACACTGAACCCTGTCTCGAAGTCG
AGCACCAGCAAGGCGAGCAGTCTGTATCTTATGCCACGACAGAGCGCTGA
GCTCACTGGTTCTAGAAACTGCCCCACTCGAGACGGCGGCACCTCATTGA
AACCCGCGATAAAGCTTGCCCGCGCTGGCAACACCGCCACAGCAGCTGCT
CGCGTGCCGATAATCGTAGTTCCAGAGACTCCACATAGGCACAACCATCA
CTGCAAGTCCACGTTTCGCAGTAGAGCTTGCGATCCGACGGTAACAGCCG
ACTTTGTAGTACCAGAGACGCAACCTGGGGTGGAAACGTCTGTGATCGAC
GTGTTCTCTGCAAAAGGGCAATTGTCGGGAGGAGGATTGGAAAGTACGGA
AGACAGTGACCGCTCCAAGTCGTCGGATCTGCTTTGCGGCAGTCGCATGA
GCTCGATAGCGGAGTCAGGGGAGCCAAAGATATCAGCTGACGCTTATGAA
TACAGCAGACCTATATCTTCGAGAAAGCGTCCGCGGCAGGAGCAGAACGT
GCCGCATCTCCAGCATCCTTACATCAATCGTGTGGATTTGCGACAACCCG
ACCGATACTCTCCACCCCGACCAGGGGGGCGAACGAACCCTCCTCTCTTT
CACCACCAAAGTACACAAATAAGGAAAGAGACCTACTTGCGTCCAGATGA
GGCGACCCAACGGGTCGATGATCAACCAGGGGCGCAGAAGGCCACGAAAA
GGGACGGTTTCTGCCCAAGCAAAGGAGCTCAAGCGACTGAAGCGGCAGCC
AATAATTTCCCGAAATGTAGCTCATGGTCACTTGGACGAATGGATCACGA
GGCCAGGGTTGCAGAGCGAGACCGTGTCATTGAGCGACACCCACCGGTCC
ATCGTCTGTTGTCCGCCGTAGCAAGTGTTGGGCAAGCGAGGAATCATCAG
GACCGTTCCCTTGAGAACGACATCACACGGTTGGATGTCACCCCCAGCTT
CACAATGGACCAACCGTCGGACTTGAAAGGATTTTTTCCAACGACCAAGA
AGATCAAGTGGACACAACCGCGTACAGCGCAAGGGCGCAGGGTTGGAGCC
TCTAATGCACAGCATAATGTACCATTAGCAGGTGTTGTGCCCTCGAAAAA
ATGCAAACCTGACCATCCGCACGCTGGAAATGTGGTGAAAGCCACCCAAC
CCCCGTGCAATAATCAGCACTGGACGCATTGCTTTTCGCGTCCGTCGGGT
CTGTCGAAGACACGGCAGCGGTCGACTACAACACTGAACCCTGTCTCGAA
GTCGAGCACCAGCAAGGCGAGCAGTCTGTATCTTATGCCACGACAGAGCG
CTGAGCTCACTGGTTCTAGAAACTGCCCCACTCGAGACGGCGGCACCTCA
TTGAAACCCGCGATAAAGCTTGCCCGCGCTGGCAACACCGCCACAGCAGC
TGCTCGCGTGCCGATAATCGTAGTTCCAGAGACTCCACATAGGCACAACC
ATCACTGCAAGTCCACGTTTCGCAGTAGAGCTTGCGATCCGACGGTAACA
GCCGACTTTGTAGTACCAGAGACGCAACCTGGGGTGGAAACGTCTGTGAT
CGACGTGTTCTCTGCAAAAGGGCAATTGTCGGGAGGAGGATTGGAAAGTA
CGGAAGACAGTGACCGCTCCAAGTCGTCGGATCTGCTTTGCGGCAGTCGC
ATGAGCTCGATAGCGGAGTCAGGGGAGCCAAAGATATCAGCTGACGCTTA
TGAATACAGCAGACCTATATCTTCGAGAAAGCGTCCGCGGCAGGAGCAGA
ACGTGCCGCATCTCCAGCATCCTTACATCAATCGTGTGGATTTGCGACAA
CCCGACCGATACTCTCCACCCCGACCAGGGGGGCGAACGAACCCTCCTCT
CTTTCACCACCAAAGTACACAAATAAGGAAAGAGACCTACTTGCGTCCAG
ATGAGGCGACCCAACGGGTCGATGATCAACCAGGGGCGCAGAAGGCCACG
AAAAGGGACGGTTTCTGCCCAAGCAAAGGAGCTCAAGCGACTGAAGCGGC
AGCCAATAATTTCCCGAAATGTAGCTCATGGTCACTTGGACGAATGGATC
ACGAGGCCAGGGTTGCAGAGCGAGACCGTGTCATTGAGCGACACCCACCG
GTCCATCGTCTGTTGTCCGCCGTAGCAAGTGTTGGGCAAGCGAGGAATCA
TCAGGACCGTTCCCTTGAGAACGACATCACACGGTTGGATGTCACCCCCA
GCTTCACATCGGGTTGATCGGGTTGA
back to top