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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1971 |
| Cds size | 1263 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9600.17305.1 >prot_H-paniculata_contig9600.17305.1 ID=prot_H-paniculata_contig9600.17305.1|Name=mRNA_H-paniculata_contig9600.17305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=421bp
MDQPSDLKGFFPTTKKIKWTQPRTAQGRRVGASNAQHNVPLAGVVPSKKC
KPDHPHAGNVVKATQPPCNNQHWTHCFSRPSGLSKTRQRSTTTLNPVSKS
STSKASSLYLMPRQSAELTGSRNCPTRDGGTSLKPAIKLARAGNTATAAA
RVPIIVVPETPHRHNHHCKSTFRSRACDPTVTADFVVPETQPGVETSVID
VFSAKGQLSGGGLESTEDSDRSKSSDLLCGSRMSSIAESGEPKISADAYE
YSRPISSRKRPRQEQNVPHLQHPYINRVDLRQPDRYSPPRPGGRTNPPLF
HHQSTQIRKETYLRPDEATQRVDDQPGAQKATKRDGFCPSKGAQATEAAA
NNFPKCSSWSLGRMDHEARVAERDRVIERHPPVHRLLSAVASVGQARNHQ
DRSLENDITRLDVTPSFTSG* back to topmRNA from alignment at H-paniculata_contig9600:2630..4719+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig9600.17305.1 ID=mRNA_H-paniculata_contig9600.17305.1|Name=mRNA_H-paniculata_contig9600.17305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2090bp|location=Sequence derived from alignment at H-paniculata_contig9600:2630..4719+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGAAAACATAATGGTATACACTCGGTCGGTGGTATCTGGGAATGAGCT
GTATTCACGGTTACTAGAGGCGTGAGTGGATTAGTGGGTACGCAACATTG
GAAGGCGAACGCTGAGGGCTGATCTGTTTATTGGAGAAATTCTGAGGAAT
TTGAACTCGAGGTAAACTGTCGTTCTGCTAATTCGGACAGGGACCCACGA
GAGAGAAGGCAGTAGTACCTGTCACCTTGTGGAGTCGATTTAACGTCTTT
GTGACTCGGCGTATTCGTTAATAACATCTGCGTAGTACTTAGGTGGGTAG
TTCGGTATTAAAACCTAGTGTTGGCGACTAGTTGTCCAGCAGCACTCGCA
CACGTACGGCGTATGCTGTTGCTTTGCCGCACCGCCGAGAATAAGAAATG
GACCAACCGTCGGACTTGAAAGGATTTTTTCCAACGACCAAGAAGATCAA
GTGGACACAACCGCGTACAGCGCAAGGGCGCAGGGTTGGAGCCTCTAATG
CACAGCATAATGTACCATTAGCAGGTGTTGTGCCCTCGAAAAAATGCAAA
CCTGACCATCCGCACGCTGGAAATGTGGTGAAAGCCACCCAACCCCCGTG
CAATAATCAGCACTGGACGCATTGCTTTTCGCGTCCGTCGGGTCTGTCGA
AGACACGGCAGCGGTCGACTACAACACTGAACCCTGTCTCGAAGTCGAGC
ACCAGCAAGGCGAGCAGTCTGTATCTTATGCCACGACAGAGCGCTGAGCT
CACTGGTTCTAGAAACTGCCCCACTCGAGACGGCGGCACCTCATTGAAAC
CCGCGATAAAGCTTGCCCGCGCTGGCAACACCGCCACAGCAGCTGCTCGC
GTGCCGATAATCGTAGTTCCAGAGACTCCACATAGGCACAACCATCACTG
CAAGTCCACGTTTCGCAGTAGAGCTTGCGATCCGACGGTAACAGCCGACT
TTGTAGTACCAGAGACGCAACCTGGGGTGGAAACGTCTGTGATCGACGTG
TTCTCTGCAAAAGGGCAATTGTCGGGAGGAGGATTGGAAAGTACGGAAGA
CAGTGACCGCTCCAAGTCGTCGGATCTGCTTTGCGGCAGTCGCATGAGCT
CGATAGCGGAGTCAGGGGAGCCAAAGATATCAGCTGACGCTTATGAATAC
AGCAGACCTATATCTTCGAGAAAGCGTCCGCGGCAGGAGCAGAACGTGCC
GCATCTCCAGCATCCTTACATCAATCGTGTGGATTTGCGACAACCCGACC
GATACTCTCCACCCCGACCAGGGGGGCGAACGAACCCTCCTCTCTTTCAC
CACCAAAGTACACAAATAAGGAAAGAGACCTACTTGCGTCCAGATGAGGC
GACCCAACGGGTCGATGATCAACCAGGGGCGCAGAAGGCCACGAAAAGGG
ACGGTTTCTGCCCAAGCAAAGGAGCTCAAGCGACTGAAGCGGCAGCCAAT
AATTTCCCGAAATGTAGCTCATGGTCACTTGGACGAATGGATCACGAGGC
CAGGGTTGCAGAGCGAGACCGTGTCATTGAGCGACACCCACCGGTCCATC
GTCTGTTGTCCGCCGTAGCAAGTGTTGGGCAAGCGAGGAATCATCAGGAC
CGTTCCCTTGAGAACGACATCACACGGTTGGATGTCACCCCCAGCTTCAC
AGTCGATTCAAATGCTCATGCTAGCGCACGAAGTAGGTTGAAGGCGGGGG
CCACAGAAACATCAGACGGGGGCCGCATGACACGTGGACAAGTAACCACA
TATCGGGCGGTCGCAGCAAGTCGGGTTGACAGAAATTCGAAGCCTGGGTT
AGCGCGGCTGCATGTCTCATCGTCTGATCAGCTTCGCCCGTACACCGCCA
GCTCGTCGATGACCCGTGACAAAAGCTCACCAATGGTACCAAGTCTCTCG
AAAACCGTAGACTGTCTTCACACAAATGGGGCCACAGCTTCGGCACAGCG
AACAGAGCCATCAAGTATTTGTCAATCTCTTTCGGCTGCACCCGTCATGC
GACCGACGGCAGTCACCGTGTTGACGAACACGTCAAACTATTCGGTTTCC
ACAGCGCTAGAACACCCACGGAGTACCCAGAGACTGTCGT back to topCoding sequence (CDS) from alignment at H-paniculata_contig9600:2630..4719+ >mRNA_H-paniculata_contig9600.17305.1 ID=mRNA_H-paniculata_contig9600.17305.1|Name=mRNA_H-paniculata_contig9600.17305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at H-paniculata_contig9600:2630..4719+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACCAACCGTCGGACTTGAAAGGATTTTTTCCAACGACCAAGAAGAT
CAAGTGGACACAACCGCGTACAGCGCAAGGGCGCAGGGTTGGAGCCTCTA
ATGCACAGCATAATGTACCATTAGCAGGTGTTGTGCCCTCGAAAAAATGC
AAACCTGACCATCCGCACGCTGGAAATGTGGTGAAAGCCACCCAACCCCC
GTGCAATAATCAGCACTGGACGCATTGCTTTTCGCGTCCGTCGGGTCTGT
CGAAGACACGGCAGCGGTCGACTACAACACTGAACCCTGTCTCGAAGTCG
AGCACCAGCAAGGCGAGCAGTCTGTATCTTATGCCACGACAGAGCGCTGA
GCTCACTGGTTCTAGAAACTGCCCCACTCGAGACGGCGGCACCTCATTGA
AACCCGCGATAAAGCTTGCCCGCGCTGGCAACACCGCCACAGCAGCTGCT
CGCGTGCCGATAATCGTAGTTCCAGAGACTCCACATAGGCACAACCATCA
CTGCAAGTCCACGTTTCGCAGTAGAGCTTGCGATCCGACGGTAACAGCCG
ACTTTGTAGTACCAGAGACGCAACCTGGGGTGGAAACGTCTGTGATCGAC
GTGTTCTCTGCAAAAGGGCAATTGTCGGGAGGAGGATTGGAAAGTACGGA
AGACAGTGACCGCTCCAAGTCGTCGGATCTGCTTTGCGGCAGTCGCATGA
GCTCGATAGCGGAGTCAGGGGAGCCAAAGATATCAGCTGACGCTTATGAA
TACAGCAGACCTATATCTTCGAGAAAGCGTCCGCGGCAGGAGCAGAACGT
GCCGCATCTCCAGCATCCTTACATCAATCGTGTGGATTTGCGACAACCCG
ACCGATACTCTCCACCCCGACCAGGGGGGCGAACGAACCCTCCTCTCTTT
CACCACCAAAGTACACAAATAAGGAAAGAGACCTACTTGCGTCCAGATGA
GGCGACCCAACGGGTCGATGATCAACCAGGGGCGCAGAAGGCCACGAAAA
GGGACGGTTTCTGCCCAAGCAAAGGAGCTCAAGCGACTGAAGCGGCAGCC
AATAATTTCCCGAAATGTAGCTCATGGTCACTTGGACGAATGGATCACGA
GGCCAGGGTTGCAGAGCGAGACCGTGTCATTGAGCGACACCCACCGGTCC
ATCGTCTGTTGTCCGCCGTAGCAAGTGTTGGGCAAGCGAGGAATCATCAG
GACCGTTCCCTTGAGAACGACATCACACGGTTGGATGTCACCCCCAGCTT
CACAATGGACCAACCGTCGGACTTGAAAGGATTTTTTCCAACGACCAAGA
AGATCAAGTGGACACAACCGCGTACAGCGCAAGGGCGCAGGGTTGGAGCC
TCTAATGCACAGCATAATGTACCATTAGCAGGTGTTGTGCCCTCGAAAAA
ATGCAAACCTGACCATCCGCACGCTGGAAATGTGGTGAAAGCCACCCAAC
CCCCGTGCAATAATCAGCACTGGACGCATTGCTTTTCGCGTCCGTCGGGT
CTGTCGAAGACACGGCAGCGGTCGACTACAACACTGAACCCTGTCTCGAA
GTCGAGCACCAGCAAGGCGAGCAGTCTGTATCTTATGCCACGACAGAGCG
CTGAGCTCACTGGTTCTAGAAACTGCCCCACTCGAGACGGCGGCACCTCA
TTGAAACCCGCGATAAAGCTTGCCCGCGCTGGCAACACCGCCACAGCAGC
TGCTCGCGTGCCGATAATCGTAGTTCCAGAGACTCCACATAGGCACAACC
ATCACTGCAAGTCCACGTTTCGCAGTAGAGCTTGCGATCCGACGGTAACA
GCCGACTTTGTAGTACCAGAGACGCAACCTGGGGTGGAAACGTCTGTGAT
CGACGTGTTCTCTGCAAAAGGGCAATTGTCGGGAGGAGGATTGGAAAGTA
CGGAAGACAGTGACCGCTCCAAGTCGTCGGATCTGCTTTGCGGCAGTCGC
ATGAGCTCGATAGCGGAGTCAGGGGAGCCAAAGATATCAGCTGACGCTTA
TGAATACAGCAGACCTATATCTTCGAGAAAGCGTCCGCGGCAGGAGCAGA
ACGTGCCGCATCTCCAGCATCCTTACATCAATCGTGTGGATTTGCGACAA
CCCGACCGATACTCTCCACCCCGACCAGGGGGGCGAACGAACCCTCCTCT
CTTTCACCACCAAAGTACACAAATAAGGAAAGAGACCTACTTGCGTCCAG
ATGAGGCGACCCAACGGGTCGATGATCAACCAGGGGCGCAGAAGGCCACG
AAAAGGGACGGTTTCTGCCCAAGCAAAGGAGCTCAAGCGACTGAAGCGGC
AGCCAATAATTTCCCGAAATGTAGCTCATGGTCACTTGGACGAATGGATC
ACGAGGCCAGGGTTGCAGAGCGAGACCGTGTCATTGAGCGACACCCACCG
GTCCATCGTCTGTTGTCCGCCGTAGCAAGTGTTGGGCAAGCGAGGAATCA
TCAGGACCGTTCCCTTGAGAACGACATCACACGGTTGGATGTCACCCCCA
GCTTCACATCGGGTTGATCGGGTTGA back to top
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