prot_H-paniculata_contig96.17302.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig96.17302.1
Unique Nameprot_H-paniculata_contig96.17302.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length263
Homology
[Close]
BLAST of mRNA_H-paniculata_contig96.17302.1 vs. uniprot
Match: D7FWR5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR5_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 2.580e-55
Identity = 123/263 (46.77%), Postives = 159/263 (60.46%), Query Frame = 0 
Query:    1 MHVASPALPESALRLLFYRAVATQHTTPSVSGGNSEGGDIASHRGARQSNTGSRVRRESMERSNRIGTEGGKGSSVGEGTKSGGNGVGGVKSVTPADLARAVVDFPLACEGLASLINATASTHGVRELLKQAVFRAKEAIEEAEKIVGAINDGQAGVAGRTSNGGGDGARVVQSEVEAVKARTSQLKAFISNAGTSRSPLDASKLWISRRMLVTESALLRTYGGILPTIKAQDAIRQGRRVRLRCALRRWQAVWRKKTLSAPP 263
            MHVASP LPE+ALR LF++A  T    PS       GGD    RG   +            R++   +  G+  S  +  KS G      ++ + + LARA+  FPLACEGLA L+ +TA+    R LLKQ   +AKEA+EE EK+V +I + Q   AG+          V ++E+ AV+ARTSQL+AF+ NA TSRS LD SKLWISRRMLV E+ LLR YGG+ PT +AQDAIRQGRRVRLR   R ++  WR+  +S PP
Sbjct:    1 MHVASPGLPEAALRHLFFQAATTGAPRPSSLPAARAGGD---GRGQTTAPATXXXXXXXXXRTSNNRSNAGRSGSFRQSGKSDGXXXXDGETTSASGLARAIAGFPLACEGLAPLVASTATELSARSLLKQVAHQAKEALEETEKVVASIREAQGTPAGQRGXXXXXXXFVPEAEISAVEARTSQLRAFMINADTSRSVLDVSKLWISRRMLVAETTLLRAYGGVGPTARAQDAIRQGRRVRLRRIFRAFETAWRENLMSRPP 260
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig96.17302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWR5_ECTSI2.580e-5546.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig96contigH-paniculata_contig96:38433..40483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig96.17302.1mRNA_H-paniculata_contig96.17302.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig96 38433..40483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig96.17302.1 ID=prot_H-paniculata_contig96.17302.1|Name=mRNA_H-paniculata_contig96.17302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MHVASPALPESALRLLFYRAVATQHTTPSVSGGNSEGGDIASHRGARQSN
TGSRVRRESMERSNRIGTEGGKGSSVGEGTKSGGNGVGGVKSVTPADLAR
AVVDFPLACEGLASLINATASTHGVRELLKQAVFRAKEAIEEAEKIVGAI
NDGQAGVAGRTSNGGGDGARVVQSEVEAVKARTSQLKAFISNAGTSRSPL
DASKLWISRRMLVTESALLRTYGGILPTIKAQDAIRQGRRVRLRCALRRW
QAVWRKKTLSAPP
back to top