prot_H-paniculata_contig9581.17288.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9581.17288.1
Unique Nameprot_H-paniculata_contig9581.17288.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
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BLAST of mRNA_H-paniculata_contig9581.17288.1 vs. uniprot
Match: A0A6H5KXW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXW1_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 3.260e-21
Identity = 49/98 (50.00%), Postives = 62/98 (63.27%), Query Frame = 0 
Query:   18 ASSSSPRNPLTDHVDVLDHILHFAAGEGYLFVAGVSKQWKRAWA-DRPKCTHLSIAVGSPSNLAWARDSGCRWDEVTCSLAAASGRSKTLRYAHSKGC 114
            +S S+P NPL D   +L H++ FAA  G+LFVAGVS+ W+ AW  +RP  T +  AV SPS L WAR SG  W    C+ AA+ G   TLRYA + GC
Sbjct:  719 SSPSAPVNPLADPT-ILRHLISFAARNGFLFVAGVSRSWRDAWGVERPPETEVDAAVQSPSRLGWARASGLGWGPSVCARAASGGHLATLRYARALGC 815
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BLAST of mRNA_H-paniculata_contig9581.17288.1 vs. uniprot
Match: A0A7S0SJ78_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ78_9CHLO)

HSP 1 Score: 50.4 bits (119), Expect = 6.880e-5
Identity = 32/89 (35.96%), Postives = 50/89 (56.18%), Query Frame = 0 
Query:   17 DASSSSPRNPLTDHVDVLDHILHFAAGEGYLFVAGVSKQWKRAWADRPKCT----HLSIAVGSPSNLAWARDSGCRWDEVTCSLAAASG 101
            D  + SP   L D V +LDH++        + ++ V ++ +   A   + +    H+S  V S + L WAR++GCRWDE+TC +AAASG
Sbjct:   11 DQPAPSPYTHLPDEV-LLDHVIMRLRPSDRVVLSCVDRRSRELVARDARGSRDRIHVSDFVNSVAALEWARENGCRWDEMTC-VAAASG 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9581.17288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXW1_9PHAE3.260e-2150.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0SJ78_9CHLO6.880e-535.96Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9581contigH-paniculata_contig9581:6005..6352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9581.17288.1mRNA_H-paniculata_contig9581.17288.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9581 4871..9263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9581.17288.1 ID=prot_H-paniculata_contig9581.17288.1|Name=mRNA_H-paniculata_contig9581.17288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MGSDYEMGEIFYVSGTDASSSSPRNPLTDHVDVLDHILHFAAGEGYLFVA
GVSKQWKRAWADRPKCTHLSIAVGSPSNLAWARDSGCRWDEVTCSLAAAS
GRSKTLRYAHSKGCL*
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