prot_H-paniculata_contig9579.17286.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9579.17286.1
Unique Nameprot_H-paniculata_contig9579.17286.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length256
Homology
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A6A3CSP3_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CSP3_HIBSY)

HSP 1 Score: 119 bits (298), Expect = 7.680e-27
Identity = 80/265 (30.19%), Postives = 137/265 (51.70%), Query Frame = 0
Query:   27 FSRVGETD-ILVAVYVDDLVITG-RCEKVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADKPSEPKSLGAV--LSGIG----ARIQESNRGRSGIQIEFRG-------MVRSLMCASTGIRTDIATT------------------------LFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRLRN 252
            F R G+ D +++ +YVDD+++ G   + ++E K  ++R F MKDLGS + +L +++ RDR N  + +SQ  Y++++L  F   +C+ + TP+  N K+S+  S     E   +  V   S +G    A   + ++  +G   +  G        ++S++  ST     +A T                        LF DS SA+HL++    H RTK+ RVH+H IRE V+EG + ++ + T DN+AD +TK ++  KF   R+
Sbjct:  902 FKRSGDNDFVILMLYVDDMLVAGPNKDHIEELKAQLAREFEMKDLGSANKILGMQIHRDRSNRKIWLSQKIYLKKILSLFSMQDCKPISTPLPINFKLSSSMSPSSEEEMMEMSRVPYASAVGNSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLKDLLEELGHNQEYVSLFCDSQSALHLARNPAFHSRTKNIRVHYHFIREKVKEGTIDMQKIHTKDNIADFMTKAINADKFTWCRS 1166          
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A7D9LPL6_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LPL6_PARCT)

HSP 1 Score: 110 bits (274), Expect = 1.160e-24
Identity = 78/273 (28.57%), Postives = 134/273 (49.08%), Query Frame = 0
Query:   38 AVYVDDLV-ITGRCEKVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADKPSEPK----SLGAVLSGI-------------------GARIQESNRGRSGIQIEFRG----------------------MVRSLMC----------ASTGIRTDIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRLRNLL 254
            ++YVDD++  +   E + + K  +++RF+++D+G +S VL + V+R+R   T+TI+Q  Y+  VLKRFG  EC+ V TP+E   K  +    D P + +    ++G   SG+                   G  + E+ R  SG   + +                       +  S  C          +  G++ D+ +T+FE++  A  LSK    H RTKH  V +H IRE V   ++ +KY +T + LAD++TK L ++ F+R R+++
Sbjct:   70 SLYVDDILCFSNNIEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKPVSTPLEPGRKFESLSENDTPIDVREYQMAIGTFNSGLTFTAHGNNPVLYGYADADWGGNV-ETRRSTSGYVFQIQNNTISWFSKRQASVSRSTTEAEYIALSTACQEAVWLRRLLSDIGLKQDVPSTIFENNQGANELSKNPKFHNRTKHIDVSFHFIREQVNRNIVCVKYCRTENMLADVMTKALPKVYFERFRDMM 341          
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: UPI000646B296 (uncharacterized protein LOC101762853 n=1 Tax=Setaria italica TaxID=4555 RepID=UPI000646B296)

HSP 1 Score: 108 bits (270), Expect = 4.120e-23
Identity = 86/273 (31.50%), Postives = 133/273 (48.72%), Query Frame = 0
Query:    1 MDVDAAYLNALVEEELFVKLPP---------------------EVSPFSRVGETDILVAVYVDDLVITGRCEK-VDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADKPSEPKSLGAVLSGIGARIQESNRGRSGIQIEFRGMVRSLMCASTGIRTDIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRLR 251
            MDV +A+LN  +EEE++VK PP                     + +P +  G   ++V +YVDD++  G     V +F   +S+ F M  +G L   L +++++    GT  + QG Y ++VL++F  D+ + + TP+      SA   AD+  EP       S IG+ +  +    +   I F   + +   AS  I    A      STSAI ++K    H +TKH  V  H +R+ V +G + LKY+ T   LADILTK L +  F RLR
Sbjct: 1199 MDVKSAFLNGFIEEEVYVKQPPGFEHPNFPDRVFKLQKALYGLKQAPRAWQGNDTLIVQIYVDDIIFGGSSHVLVKKFADVMSKEFEMSMMGELKFFLGLQIKQT-SEGTF-VHQGKYTKDVLQKFAMDDAKPISTPMP----TSAALDADENGEPVDQKDYRSMIGSLLYLT---ATRPDIHFAVCMCARFQASPRISHRQAVKRIM-STSAISVAKNPVLHSKTKHIEVRHHFLRDHVEKGDIELKYIDTSQQLADILTKPLDQTTFARLR 1461          
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: UPI001D054B2F (reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D054B2F)

HSP 1 Score: 101 bits (252), Expect = 1.270e-21
Identity = 77/231 (33.33%), Postives = 116/231 (50.22%), Query Frame = 0
Query:   23 EVSPFSRVGETDILVAVYVDDLVITGRCEK-VDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADKPSEPKSLGAVLSGIGARIQESNRGRSGIQIEFRGMVRSLMCASTGIRTDIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRLRN 252
            +VS F R G++  ++A+YVDDL++TG C + V   K  +S+RF+M DLG  S  L I+V RDR    + +SQ +YI ++L+ +   +C    TP+  +      +    P  PK   A         +E+        I  R +++ L     G      T + ED+  AI L+  +  H RTKH  + WH IRE V EG ++L  ++     AD LTK L R  F R R+
Sbjct:  122 DVSVFVR-GKS--IIAIYVDDLLLTGACPREVQRIKDALSKRFQMTDLGPCSHYLGIKVTRDRARRRIELSQRAYIEKILRTYNMSDCNPTDTPMAADPLQPPAEDWHAP--PKDQAAYAK------REA--------IWLRSLMKDLSHPQAG-----PTAIHEDNKGAIDLANNAQHHSRTKHISLKWHFIREKVAEGTVSLIKIEGTKQPADGLTKALPRDAFLRFRD 328          
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A5E8BDZ8_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BDZ8_9ASCO)

HSP 1 Score: 103 bits (256), Expect = 3.000e-21
Identity = 78/254 (30.71%), Postives = 130/254 (51.18%), Query Frame = 0
Query:   31 GETDILVAVYVDDLVITGRC-EKVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADKPSEPKSLGAVLSGIGARIQESN--------RGRSGIQIEFR--------------------GMVRSLMCA-STGIRTDIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRLRNLL 254
            G T +++A+YVDDL+I+G   E + + K ++S  F+MKDLG +   L + V++   + T+ +S+  YI ++L+ FG   C  V+TP+   + +S    +D  ++     ++   IG  I  +N         G + + +E+R                    G V  L+      I   +  T+FED+   I L++    H RTKH  V +H +R ++R GV+ L+Y+ T   LAD+ TK L R+KF+ LR LL
Sbjct: 1519 GSTMVIIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYHITVDVSR--YIFDMLEEFGMQNCSSVKTPLPTRD-LSDFSESDSATDASMYRSI---IGKLIYAANCARPDLAVAGTAELGLEYRAQKVYKLVGYSDADYAQDKAGTVSHLLVVVPCKIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGLL 1766          
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: UPI00090092BD (uncharacterized protein LOC109134715 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00090092BD)

HSP 1 Score: 101 bits (252), Expect = 9.230e-21
Identity = 83/256 (32.42%), Postives = 131/256 (51.17%), Query Frame = 0
Query:    1 MDVDAAYLNALVEEELFVKLPPEVSPFS-----RVGETDILVAVYVDDLVITGRCE-KVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADKPSEP---KSLGAVLSGIGARIQESNRGRSGIQIEFRGMVRSLMCASTGIRTDIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKF 247
            MDV  A+L+  +EEE+++KLP   +  +     R+    + V VYVDDL+I G  + +V + KH +S  F MKDLG+L   L +EV R   +  + + Q  Y  +++   G    +   TP+E N  + AR   +  SEP   K L   L     R+    +G  G  I  R    +L      +R D    L+ DS +A+H++     H RTKH  +  H +R+ ++ G +   +++TG+ LADI TK LS+ +F
Sbjct:  737 MDVHNAFLHGDLEEEVYMKLPMGFNSTTPGKVCRLRHVSLHVLVYVDDLIIAGSSKVEVVKLKHYLSACFYMKDLGALKYFLGLEVARG--DKGLFLCQRKYALDIISETGLLGAKPATTPMEQNHHL-ARCEGELFSEPEKYKRLIGRLMEAALRVIRYLKGCPGQGILLRRDC-NLQIYGFCVRHDRPMRLYCDSQAALHIAANPVFHERTKHIEMDCHFVRDEIQSGNIVTTHIRTGNQLADIFTKALSKPQF 988          
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 100 bits (250), Expect = 1.790e-20
Identity = 83/325 (25.54%), Postives = 140/325 (43.08%), Query Frame = 0
Query:   31 GETD-ILVAVYVDDLV-ITGRCEKVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADKPSEPKSL------------------------------------------------GAVLSGI-------------------GARIQESNRGRSGIQIEFRG----------------------MVRSLMC----------ASTGIRTDIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRLRNLL 254
            G+ D +++A+YVDD++  +   E + + K  +++RF+++D+G +S VL + V+R+R   T+TI+Q  Y+  VLKRFG  EC+ V TP+E   K  +    D P + +                                                  G + SG+                   G  + E+ R  SG   + +                       +  S  C          +  G++ D+ +T+FED+  AI LSK    H RTKH  V +H IRE V   ++ +KY +T + LAD++TK L ++ F+R R+++
Sbjct: 1005 GKIDFVILALYVDDILWFSNNTEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKAVSTPLEPGRKFESLSENDTPIDVREYQMAIGCLTYATNATRPDLAAAVGILSKYMARPGKDHWQGVKRVLRYVKGTLHSGLTFTAHGNNPVLYGYADADWGGDV-ETRRSTSGYVFQIQNNTISWCSKRQASVSRSTTEAEYIALSTACQEAVWLRRLLSDIGLKQDVPSTIFEDNQGAIELSKNPKFHNRTKHIDVSFHFIREQVNRNIVCVKYGRTENMLADVMTKALPKVSFERFRDMM 1328          
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4)

HSP 1 Score: 100 bits (249), Expect = 2.100e-20
Identity = 86/311 (27.65%), Postives = 128/311 (41.16%), Query Frame = 0
Query:   35 ILVAVYVDDLVI-TGRCEKVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVE------------------------------------------------------------------------------GNEKVS----ARKSADKPSEPKSLGAVLSGIGARI-----QESNRGRSGIQIEFRGMVRS--------LMCASTGIRTDIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQR 249
            ++VAVYVDDL+I +   E V + K ++  +F M DLG    +L +E+ RDRP+ T++ISQ +Y  E+L+RFG  +C+   TP+E                                                                              GN K+     A  + DK +     G V +  GA I     ++S+  +S  + E+     +        +     G   D  T L+ D+ SAI L K S  H RTKH  V +H IRE V +  + L Y+ T D +AD LTKGLS++K  +
Sbjct:  393 VVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLRKLSEAEVDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTKIEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVADALTKGLSKVKLDK 703          
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: I1R322_ORYGL (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Oryza TaxID=4527 RepID=I1R322_ORYGL)

HSP 1 Score: 96.7 bits (239), Expect = 3.940e-20
Identity = 81/257 (31.52%), Postives = 124/257 (48.25%), Query Frame = 0
Query:   17 FVKLPPEVSPFSRV-GETDILVAVYVDDLVITGRCE-KVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADKPSEPK--------------------SLGAVLSGIGARIQESNRGRSGIQIEFRGMVRS-LMCASTGIRTDIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRL 250
            F + P E + + R  G   +LV VYVDDLVI G  + +V  FK  +   F+M DLG LS  L I+V +D  +  +T+ Q +Y + V++  G  +C    TP+E   K+S   +A++    +                    S+G V++      +      +  Q  +   + S L+   TG        L  DS SA+ L+K    H R+KH +V +H IR ++ EG +   Y+ T D LAD+LTK L R+KF  L
Sbjct:    3 FEQSPHEAAIYRRGNGGNALLVGVYVDDLVIIGTKDTEVAAFKEEMKATFQMSDLGPLSFYLGIKVHQD--DSGITLRQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRLVGSLRYLTHTRLDLAFSVGYVVTLSSCEAEYMAASAASTQALWLAQLLSDLLGRDTG-----TVELRVDSKSALALAKNPVFHERSKHIQVRYHFIRSYLEEGSIKASYINTKDQLADLLTKPLGRIKFLEL 252          
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: C7JA11_ORYSJ (Adenine DNA glycosylase n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=C7JA11_ORYSJ)

HSP 1 Score: 99.4 bits (246), Expect = 5.680e-20
Identity = 78/238 (32.77%), Postives = 115/238 (48.32%), Query Frame = 0
Query:   31 GETDILVAVYVDDLVITGRCE-KVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSAD--------------------KPSEPKSLGAVLSGIGARIQESNRGRSGIQ-IEFRGMVRSLMCASTGIRTDIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLK 246
            G   +LV VYVDDLVITG  + +V  FK  +   F+M D G LS  L IEV +D  N  +T+ Q +Y + V++  G  +C    TP+E   K+S   +A+                    +P    S+G V++      +      +  Q +    ++  L+   TG        L  DS SA+ L+K    H R+KH RV +H IR ++ EG +   Y+ T D LAD+LTK L R+K
Sbjct:  498 GGNALLVGVYVDDLVITGTKDAEVAAFKEEMKATFQMSDQGPLSFYLGIEVHKD--NSGITLRQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRLVGSLRYLTHTRPDLAFSVGYVVALSSCEAEYMAASAASTQALWLARLLSDLLGRDTG-----TVELRVDSKSALALAKNPVFHERSKHIRVRYHFIRSYLEEGSIKASYINTKDQLADLLTKPLGRIK 728          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3CSP3_HIBSY7.680e-2730.19Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A7D9LPL6_PARCT1.160e-2428.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000646B2964.120e-2331.50uncharacterized protein LOC101762853 n=1 Tax=Setar... [more]
UPI001D054B2F1.270e-2133.33reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A5E8BDZ8_9ASCO3.000e-2130.71Integrase catalytic domain-containing protein n=1 ... [more]
UPI00090092BD9.230e-2132.42uncharacterized protein LOC109134715 n=1 Tax=Beta ... [more]
A0A6S7HNY1_PARCT1.790e-2025.54Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0C9VSW1_SPHS42.100e-2027.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
I1R322_ORYGL3.940e-2031.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
C7JA11_ORYSJ5.680e-2032.77Adenine DNA glycosylase n=2 Tax=Oryza sativa subsp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 30..116
e-value: 3.3E-17
score: 63.0
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 35..135
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 35..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9579contigH-paniculata_contig9579:3665..4952 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9579.17286.1mRNA_H-paniculata_contig9579.17286.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9579 2416..4952 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9579.17286.1 ID=prot_H-paniculata_contig9579.17286.1|Name=mRNA_H-paniculata_contig9579.17286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=256bp
MDVDAAYLNALVEEELFVKLPPEVSPFSRVGETDILVAVYVDDLVITGRC
EKVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREV
LKRFGFDECRGVRTPVEGNEKVSARKSADKPSEPKSLGAVLSGIGARIQE
SNRGRSGIQIEFRGMVRSLMCASTGIRTDIATTLFEDSTSAIHLSKVSGS
HCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRL
RNLLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like