mRNA_H-paniculata_contig9579.17286.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A5A7SLT1_CUCME (Putative copia-type polyprotein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7SLT1_CUCME) HSP 1 Score: 231 bits (589), Expect = 8.510e-63 Identity = 152/452 (33.63%), Postives = 218/452 (48.23%), Query Frame = 1 Query: 4 FCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIF---VGKNTNNPTGSISKGEPKSAAEALKGPEADKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAIRTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKG-----------------------GEEFFETKGMDVDAAYLNALVEEELFVKLPPEVS-----------------------------------------PFSRV------GETDILVA-VYVDDLVITGRCEKV-DEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSAD 1134 FC ENG ++ +TPQQ+GV ER R++ M R+ + M + +WA+A AVY N +PTR TP + W G P + HLRVFGC Y Q+R KLDDK+ +F+G+D S Y++ NP K + R ++F N N+ EP + EA + DKW+ AM+EE +A+ KN+TW + LP G KA+ KWVFK K E G V YKARLVA+ YSQ KG + ++ MDV +A+LN +EEE++++ PP S P+ G DILV +YVDDL+ TG C + ++ K +++ F M D+G +S L IEV++ + ISQ Y RE+L++F + V TP+E K+S + D Sbjct: 487 FCVENGIRRTMKVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDKLEDYKFFEPLNFEEASQN---DKWKIAMDEEIKAIKKNDTW---ELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVQSAFLNGYLEEEVYLEQPPSYSVKGQEDKILKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKVMTQEFEMTDIGLMSYYLGIEVKQSEER--IFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGD 930
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A2I0X5W4_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X5W4_9ASPA) HSP 1 Score: 210 bits (535), Expect = 2.030e-55 Identity = 136/453 (30.02%), Postives = 216/453 (47.68%), Query Frame = 1 Query: 4 FCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIFVGKNTNNPTGSISKGEPKSAAEALKGPEADKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAIRTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKGGEEFFETKG------------------------MDVDAAYLNALVEEELFVKLPPEVSPFSRVGETD--------------------------------------------------ILVAVYVDDLVITGRCEK-VDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADK 1137 FC + G ++ + Y+PQQ+GVAER R++ +M R+ + + M + +WAEA ++Y NR P TP E W G P + HL++FG Y QQR KL+DK+ +F+G+DE + Y++ +P NK L R + + S + E S EA+K +KW+ AM+EE +++ +N+TW + LP G + I KWVFK+K+ G + YKARLVA+ Y Q K G ++ E MDV +A+LN ++EEE++++ PP + ++GE + VA+YVDDL+ G K ++ FK + + F M DLG + L +EVR+ + + +SQ +Y +++LK+ + C V TP+E K S D+ Sbjct: 513 FCEQQGVRRFLTTPYSPQQNGVAERKNRTILDMVRSMLKSKEMPKEFWAEAVQCSIYIQNRCPHMKLEDKTPQEAWSGKKPTVSHLKIFGSVAYAHVPDQQRTKLEDKSKKYVFIGYDEQTKGYKLLDPINKKVVLSRDVRVNEARKWDWNNSSEEQENISFEEAVKN---EKWKEAMDEEIKSIERNKTW---ELAELPKGSRPIGVKWVFKKKMNAQGEIDRYKARLVAKGYIQ-KAGIDYDEVFAPVTRMETIRLLISYAAQFEWPIYQMDVKSAFLNGVIEEEIYLEQPPG---YKKIGEEQKVLKLRKALYGLKQAPRAWNTRIDIYFKKNGFTQCPYEHALYVKKKGGNLLFVALYVDDLLFMGNNGKMIENFKCEMEQEFEMTDLGLMKYFLGLEVRQGKSG--IFVSQEAYSKDILKKNKMENCNPVTTPMELGAKFSRFDGGDR 953
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A6A3B0J2_HIBSY (Agamous-like MADS-box protein AGL6 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B0J2_HIBSY) HSP 1 Score: 209 bits (533), Expect = 4.930e-55 Identity = 146/492 (29.67%), Postives = 226/492 (45.93%), Query Frame = 1 Query: 1 QFCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIF-------------------------------------------VGKNTNNPTGSISKGEPKSAAEALKGPEADKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAIRTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKG-----------------------GEEFFETKGMDVDAAYLNALVEEELFV----------------------------------------------KLPPEVSPFSRVGETDIL-VAVYVDDLVITGRCEKV-DEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSAD 1134 +FC NG ++ + +PQQ+GVAER R++ +M R+ + + + + +WAEA AVY NR+PTR G TP E W G P + HLR FG +V ++R KLDDK+ IF+G+D +S Y++ NP NK + R ++F N N+ I+ K + + + KWR AM+EE +A+ KN+TW + LP G KAI KWV+K K G + +KARLVA+ YSQ G + ++ + MDV +A+LN ++EEEL++ K P E + + ++ + DIL V +YVDDL+ TG + +EFK + + F M D+G ++ L IEV++ N + ISQ SY +E+LK+F + C+ + TP E K++ + + Sbjct: 525 EFCEANGIRRPMTVPRSPQQNGVAERKNRTILDMARSMLKSKKLPKEFWAEAVSCAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLRTFGSIAHVHVPDERRTKLDDKSESFIFIGYDANSKGYKLYNPDNKKFVISRDVVFNEEGEWDFNSHTDDFNFFPQFEEDEQTMREQLDESQQELATPPTSPNINHSRRLITFIIVKWESNFQEAVQEKKWRDAMDEEIKAIEKNDTW---ELTSLPKGHKAIGVKWVYKTKQNAKGEIERHKARLVAKGYSQKAGIDYDEIFAPVARLETIRLIISLAAQNKWKIQQMDVKSAFLNGVLEEELYIQQPSGYEVKGHEDKVLKLNKALYGLKQAPRAWNSRIDKYFQENGFNKCPYEHALYIKIKDEDILIVCLYVDDLIFTGSNPSMFNEFKDVMMKEFEMTDMGLMAYYLGIEVKQQ--NDGIFISQESYAKEILKKFKMENCKPISTPAEYGIKMTKHEEGE 1011
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A6A3CF54_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CF54_HIBSY) HSP 1 Score: 204 bits (520), Expect = 2.670e-53 Identity = 150/507 (29.59%), Postives = 231/507 (45.56%), Query Frame = 1 Query: 1 QFCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIF-------VGKNTNN----------------------------PTGSI----------------SKGEPKSAAEALK-------GPEADKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAIRTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKG-----------------------GEEFFETKGMDVDAAYLNALVEEELFV----------------------------------------------KLPPEVSPFSRVGETDIL-VAVYVDDLVITGRCEKV-DEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSAD 1134 +FC NG ++ + +PQQ+GVAER R++ +M R+ + + + + +WAEA AVY NR+PTR G TP E W G P + HLR FG +V ++R KLDDK+ IF+G+D +S Y++ NP NK + R ++F +T++ PT E +A EAL+ + KWR AM+EE +A+ KN+TW + LP G KAI KWV+K K G + +KARLVA+ YSQ G + ++ + MDV +A+LN ++EEEL++ K P E + + ++ + DIL V +YVDDL+ TG + +EFK + + F M D+G ++ L IEV++ N + ISQ SY +E+LK+F + C+ + TP E K++ + + Sbjct: 550 EFCEANGIRRPMTVPRSPQQNGVAERKNRTILDMARSMLKSKKLPKEFWAEAVSCAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLRTFGSIAHVHVPDERRTKLDDKSESFIFIGYDANSKGYKLYNPDNKKFVISRDVVFNEEGEWDFNSHTDDFNFFPQFEEDEQTMREQLDESQQELATPPTSXXXXXXXXXXXXXXXXXSQSEELCNAQEALEISMSFQEAVQEKKWRDAMDEEIKAIEKNDTW---ELTSLPKGHKAIGVKWVYKTKQNAKGEIERHKARLVAKGYSQKAGIDYDEVFAPVARLETIRLIISLAAQNKWKIQQMDVKSAFLNGVLEEELYIQQPSGYEVKGHEDKVLKLKKALYGLKQAPRAWNSRIDKYFQENGFNKCPYEHALYIKIKDEDILIVCLYVDDLIFTGSNPSMFNEFKDVMMKEFEMTDMGLMAYYLGIEVKQQ--NDGIFISQESYAKEILKKFKMENCKPISTPAEYGIKMTKHEEGE 1051
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A2Z6N7E5_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6N7E5_TRISU) HSP 1 Score: 203 bits (517), Expect = 6.070e-53 Identity = 147/480 (30.63%), Postives = 213/480 (44.38%), Query Frame = 1 Query: 4 FCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIF-------------------------VGKNTNNP-TGSISKGEPKSAAEALKGP---EADKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAIRTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKGGEEFFETKG------------------------MDVDAAYLNALVEEELFVKLPP-----------------------------------------EVSPFSRV--------GETDILVAVYVDDLVITGRCEKV-DEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSAD 1134 F ++G K + YTPQQ+GVAER R++ + R+ + + N+ +R+W EA AVY LNR P + TP E W G P L +L+VFGC Y Q R KLDDK IF+G+ E++ Y++ NP + + R + F V + P T P+ + + P D W AM+EE A+ KN TW + LP G K I KWV+K K G V +KARLVA+ Y Q K G ++FE MDV +A+LN ++EEE++V+ PP SP+ G+ ++V +YVDDL+ TG ++ EFK N+ +F M D+G +S L IEV++ N + ISQ Y ++LK+F + C+ + TPVE K+ D Sbjct: 589 FLRKHGVKHQMTTRYTPQQNGVAERKNRTIMDNVRSMLHSKNLPKRFWGEAVTCAVYLLNRCPVKSIRDKTPQEAWSGQKPILSNLKVFGCIAYAHVPDQLRKKLDDKAEKCIFVGYSEETKAYKVYNPETQKVVISRDVTFDENGSWDWSEKKKELLHVPVTINEEVDDKVDEPSTEPTQDSPPRRYPQRERHPPPTNKDCWMKAMDEEIHAIEKNNTW---ELTTLPEGKKPIGVKWVYKTKNNPKGEVDRFKARLVAKGYKQ-KPGIDYFEVFAPVARLDTVRMILSLATQNQWNIFQMDVKSAFLNGVLEEEVYVEQPPCYLQQGSEDKVYKLKKALYGLKQAPRAWYTRIDTYFINNGFHRSPYEHALYVKANKDGDV-VIVCLYVDDLIFTGNNSRLLAEFKENMCTQFEMTDMGLMSYFLGIEVKQT--NDGIFISQKKYAADILKKFKMESCKPMLTPVEERLKLEKESGGD 1061
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A6L2MLH5_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2MLH5_TANCI) HSP 1 Score: 202 bits (515), Expect = 8.550e-53 Identity = 142/418 (33.97%), Postives = 203/418 (48.56%), Query Frame = 1 Query: 4 FCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIFVGKNTNNPTGSISKGEPKSAA--------------------EALKGPEA---DKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAIRTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKGGEEFFETKG------------------------MDVDAAYLNALVEEELFVKLPPEVSPFSRVGETDILVAVYVDDLVITGRCEKVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVS 1116 FC +NG ++ +A Y+PQQ+GV ER R++ M R+ + T M + +WAEA + AVY LN P++ + TP E W+G P + HLRVFG YV SQ+R KLDD++ +F+G+D+ S + S Q + F+ T EPK + E L EA KWR AMEEE +++ KN+TW + LP G KAI KWV+K K G V YKARLVA+ Y + K G E+ E MDV A+LN L+EEE++V+ P + G + ++ DE K +++R F M D+G +S IE+++ + + I Q Y +E+LKRFG D+C V TP+E K S Sbjct: 410 FCEDNGIRRFLTAPYSPQQNGVVERKNRTILNMVRSMLKTKKMPKEFWAEAVYCAVYLLNPCPSKSLDNKTPQEAWNGLKPTVSHLRVFGNIAYVYIPSQKRLKLDDRSEKHVFVGYDKQSK-----GSWDWSIQESERYDFLPMTDEEET--YESREPKKRSLQEIYEVTDEIPLLCLYVDCEPLVYEEAMKIKKWRQAMEEEIKSIEKNDTW---ELTTLPKGQKAIGVKWVYKAKKNTKGEVEKYKARLVAKGYKK-KHGIEYEEVCAPVARLETIRMIIAIAAQHKWKIHQMDVKLAFLNELLEEEVYVEQPEGYVAKGQEGNSQSMI----------------DELKKSMTREFEMTDIGLMSYYQGIELKQT--DEGIFICQERYAKEILKRFGMDKCNPVGTPIEHKVKPS 798
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A6A3BSI6_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BSI6_HIBSY) HSP 1 Score: 202 bits (515), Expect = 1.040e-52 Identity = 146/454 (32.16%), Postives = 221/454 (48.68%), Query Frame = 1 Query: 1 QFCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIFVGKNT---NNPT-------------GSISKG------------------------------EPKSAAEALKGPEADKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAIRTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKG---GEEFF-------ETKGMDVDAAYLNALV------------------EEELFVKLPPEVSPFSRVGETDIL-VAVYVDDLVITGRCEKV-DEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSAD 1134 +FC NG ++ +PQQ+GVAER ++ +M R+ + + + + +WAEA AVY NR+PTR G TP E W G P + HLR FG T+V ++ KLDDK IF+G+D +S Y++ NP NK + R ++F + N+ T GS S+ EP S EA+ + +KWR AM+EE +A+ KN+TW + LP G KAI KWV+K K G + +K RLVA+ YSQ G EE + E KG + L + +E F K P E + + ++ + DIL V +YVDDL+ TG + +EF + + ++F M D+G ++ L IEV++ N + ISQ +Y E+LK+F + C+ + TP E K++ + + Sbjct: 487 EFCEANGIRRPMIVPRSPQQNGVAERKNITILDMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVWGKTPQEAWSGRKPGISHLRTFGSITHVHVPDERITKLDDKNESFIFIGYDANSKGYKLYNPNNKKFVISRDVVFNEEGEWDFNSHTDDFNFFPQFEEDDGSQSERVVQRTRSLRDLYEVTERQDNLTLFCLFADCEPVSFQEAV---QENKWRDAMDEEIKAIEKNDTW---ELTSLPNGHKAIGVKWVYKIKQNAKGEIERHKVRLVAKGYSQKAGIDYDEEVYIQQPSGYEVKGHEDKVLKLKKALYGLKQAPKAWNSRIDKYFQENGFKKCPYEHALYIKIKDEDILIVCLYVDDLIFTGSNPSMFNEFNYVMMKKFEMTDMGLMAYYLGIEVKQQ--NDGIFISQENYANEILKKFKMENCKPISTPAEYRIKMTKHEEGE 932
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: Q7XMT0_ORYSJ (OSJNBa0029L02.7 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XMT0_ORYSJ) HSP 1 Score: 197 bits (501), Expect = 2.520e-51 Identity = 176/597 (29.48%), Postives = 271/597 (45.39%), Query Frame = 1 Query: 4 FCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIFVGKNTNNPTGS-----------ISKGEP--------------KSAAEALKGPEADKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAIRTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKG--GEEFFETKGMDVDAAYLNALVEEELFVKLPPEVSPFSRVGETDILVAVYVDDLVITG-RCEKVDEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKV---SARKSADKPSEPKSLGAV-----------------------------LSGIG------ARIQESNRGRSGI-----------QIEFRGMVRSLMCASTGIRTDIA---------------------TTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRLR 1500 +CA+ G ++ +A Y+PQQ+GV ER ++V R + +A R + EA AAVY LNR+PT+ +G TPYE WHG P +EHLRVFGC +V KLDD+ SP I +P A +R + + T +S EP + A ++ + + WR AMEEE R++ +N+TW D LPAG KAI KWV+K K G+V +KARLVA+ Y Q +G EE F L AL ++V+ G + ++V VYVDDL+I+G + +++ FK + ++F M DLG LS L +EV + + +SQ +Y ++L++ G + C ++P++ K+ S K+ D ++G++ LS IG A + + +G+ Q + + +V C + I A T + D+ SAI+L K H R+KH +H IRE V + +A++YV++ D LADIL K + R++F +R Sbjct: 265 YCADRGMRRELTAPYSPQQNGVVERRNQTVMAAARCMLKSAGCRRVFGGEAVTAAVYVLNRSPTKALDGVTPYEAWHGRCPSVEHLRVFGCVGHVKSVRPNLRKLDDRGGQAGTTVQGGASPASTIVSPSPSGAAVRVEFCTPPSSVTPGTEEGPVRYRRVQDILSTTEPVLDFDYSDQCLLATEEPASFVEAEQHECWRKAMEEELRSIEENQTWSLAD---LPAGHKAIGLKWVYKLKKDPTGAVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIALA--AMYVR---------GNGCSKLIVGVYVDDLIISGAQPSEIEVFKLEMKKKFCMSDLGLLSYYLGMEVVQKETG--VFLSQTAYAAKILEKTGMEGCNSTQSPMDARLKLRKESDGKAVDPTMYKSTVGSLRYLVNTRPDLAYSVGYDTGCWFARKGTEGLSLIGFSDSDMAGDLDDRKSTTGVLYMLGKSLISWQSQKQKVVALSSCEAEYIAATTAACQGIWLTRLLAELIGEEPSQTVMKVDNKSAINLCKNPVLHERSKHIDTRYHFIRECVEKKQIAVEYVRSEDQLADILRKPVGRVRFLEVR 845
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A6A3D8T4_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3D8T4_HIBSY) HSP 1 Score: 196 bits (498), Expect = 1.870e-50 Identity = 185/664 (27.86%), Postives = 281/664 (42.32%), Query Frame = 1 Query: 1 QFCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIFVGKNT----------------NNPTG---------SISKG-----------------------------------EPKSAAEALKGPEADKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAI-RTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKGGEEFFETKGMDVDAAYLNALVEEELFVKLPP--EVSPFS-RVGETDIL-VAVYVDDLVITGRCEKV-DEFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSADK--PSEPKSLGAVLS-------------GIGARIQES------------------------------------------------NRGRSGI-----QIEFRGMVR------------------SLMCASTGIRT---------DIATTLFEDSTSAIHLSKVSGSHCRTKHTRVHWHGIREWVREGVLALKYVQTGDNLADILTKGLSRLKFQRLRNLL 1509 +FC NG ++ + +PQQ+GV ER R++ +M R+ + + + + +WAEA AVY NR+PTR G TP E W G P + HLR FG T +V ++R KLDDK+ IF+G+D +S Y++ NP NK + R + + T +PT S S G EP S EA+ + KWR AM+EE +A+ KN+TW + LP G KAI + KW ++ MDV +A+LN ++EEE++++ P EV ++ + DIL V +YVDDL+ TG + +EFK + + F M D+G ++ L IEV++ N + IS SY +E+LK+F + C+ + TP E K++ + + P+ KSL L G+ +R ES R +G I F M + S +C + +R + T ++ D+ SAI L+K H R+KH + +H IRE V + ++YV++ D +ADI TK L+ F RLRNLL Sbjct: 615 EFCEANGIRRPMTVPRSPQQNGVVERKNRTILDMARSMLKSKKLPKEFWAEAVSCAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLRTFGSTAHVHVPDERRTKLDDKSESFIFIGYDANSKGYKLYNPDNKKFVISRDVFEEDEQTMREQLDESQQELATPPTSPTSTTQGDSSPLSSSSGSQSERVVQRTRSLRDLYEVTERQDNLTLFCLFADCEPVSFQEAV---QEKKWRDAMDEEIKAIEKNDTW---ELTSLPKGHKAIAQNKWKIQQ----------------------------------MDVKSAFLNGVLEEEVYIQQPSGYEVKGHEDKIKDGDILIVCLYVDDLIFTGSNPSMFNEFKDVMMKEFEMTDMGLMAYYLGIEVKQQ--NDGIFISHESYAKEILKKFKMENCKPISTPTEYGIKMTKHEEGESVDPTFFKSLVGSLRYLTCTRPDILHAVGLVSRYMESPTTTHFKAAKRILRYLKGTIDFGLFYSVSNDYKLVGYSDSDWGGDIDNRRSTTGFVFFMGDIAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKEIGLIQEEPTKVYVDNKSAIALAKNPVFHDRSKHIDIRYHYIRECVARKDVEVEYVKSQDQVADIFTKPLTNEDFLRLRNLL 1236
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Match: A0A6A2YJM7_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YJM7_HIBSY) HSP 1 Score: 193 bits (491), Expect = 1.530e-49 Identity = 140/472 (29.66%), Postives = 217/472 (45.97%), Query Frame = 1 Query: 1 QFCAENGTKQGFSAAYTPQQSGVAERNWRSVFEMTRNRMITANMGRRYWAEAAHAAVYCLNRAPTRPHNGGTPYEKWHGTTPKLEHLRVFGCTTYVIFQSQQRCKLDDKTWVGIFLGHDEDSPIYRICNPGNKSAQLRRKIIFVGKNTNN-------------PTGS-----------------------------------------------ISKGEPKSAAEALKGPEADKWRAAMEEEWRALGKNETW*SEDPGRLPAGGKAIRTKWVFKRKLKEDGSVAHYKARLVAQVYSQVKG-----------------------GEEFFETKGMDVDAAYLNALVEEELFVKLPPEVSPFSRVGETDILV----AVYVDDLVITGRCEKVD-------EFKHNISRRFRMKDLGSLSCVLRIEVRRDRPNGTMTISQGSYIREVLKRFGFDECRGVRTPVEGNEKVSARKSAD 1134 +FC NG ++ + +PQQ+GVAER R++ +M R+ + + + + +WAEA AVY NR+PTR G TP E W G P + HLR FG +V ++R KL DK+ IF+G+D +S Y++ NP NK + R + + T PT + EP S EA+ + KWR AM+EE +A+ KN+TW + LP G KAI KWV+K K G + +KARLVA+ YSQ G + ++ + MDV +A+LN ++EEE++++ P S + G D ++ A+Y ++D EFK + + F M D+G ++ L IEV++ N + ISQ SY +E+LK+F + C+ + TP E K++ + + Sbjct: 536 EFCEANGIRRQMTVPRSPQQNGVAERKNRTILDMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVWGKTPQEAWSGRKPDISHLRTFGSIAHVHVPDERRTKLGDKSESFIFIGYDANSKGYKLYNPNNKKFVISRDVFEEDEQTMREQLDESQQELATPPTXXXXXXXXXXXXXXXXXXXXSERVVQHTRSLRDLYEVTERQDNLTLFCLFADCEPMSFQEAV---QEKKWRYAMDEEIKAIEKNDTW---ELTSLPKGHKAIGVKWVYKTKQNTKGEIERHKARLVAKGYSQKAGIDYDEVFAPVARLETIRLIISLAAQNKWKIQHMDVKSAFLNGVLEEEVYIQQP---SGYEVKGHEDKVLKLKKALYGLKQAPRAWNSRIDNNPSMFNEFKDVMMKEFEMTDMGLMAYYLGIEVKQQ--NDGIFISQKSYAKEILKKFKMENCKPISTPAEYGIKMTKHEEGE 996 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9579.17286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9579.17286.1 >prot_H-paniculata_contig9579.17286.1 ID=prot_H-paniculata_contig9579.17286.1|Name=mRNA_H-paniculata_contig9579.17286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=256bp MDVDAAYLNALVEEELFVKLPPEVSPFSRVGETDILVAVYVDDLVITGRCback to top mRNA from alignment at H-paniculata_contig9579:2416..4952+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9579.17286.1 ID=mRNA_H-paniculata_contig9579.17286.1|Name=mRNA_H-paniculata_contig9579.17286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2537bp|location=Sequence derived from alignment at H-paniculata_contig9579:2416..4952+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9579:2416..4952+ >mRNA_H-paniculata_contig9579.17286.1 ID=mRNA_H-paniculata_contig9579.17286.1|Name=mRNA_H-paniculata_contig9579.17286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1536bp|location=Sequence derived from alignment at H-paniculata_contig9579:2416..4952+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |