prot_H-paniculata_contig9574.17284.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9574.17284.1
Unique Nameprot_H-paniculata_contig9574.17284.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length344
Homology
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 128 bits (322), Expect = 1.210e-30
Identity = 70/144 (48.61%), Postives = 94/144 (65.28%), Query Frame = 0
Query:  193 NLTEAESKGEPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLP 336
            NL E   KGEP S  EA+KGPE EKW+ A+ EE +A+  N TW       LP GR+ I  KWIFK+KL E+G+V  YK RLVA+G+SQ EG  + ET APV R   +R++   AA + +E+   D+  A+LN  +EEE+F++LP
Sbjct:  167 NLVE---KGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVK--NLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEEIFMELP 305          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A0C9UNN1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9UNN1_SPHS4)

HSP 1 Score: 121 bits (304), Expect = 2.150e-29
Identity = 64/135 (47.41%), Postives = 88/135 (65.19%), Query Frame = 0
Query:  203 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPP 337
            P++  EAL  PEA+KW  A ++E EAL+  GTW+     +LP GRKAI  +W+F  K  E G +  YK RLVA+G+SQ  G  F +T AP A+ + +RSV CLAA  D ELE  D+  A+LN  +EEE++++ PP
Sbjct:   51 PRTLKEALASPEADKWFDAAKKEVEALLREGTWKL---AKLPQGRKAIGCRWVFVIKYDEHGFIERYKARLVAKGYSQRPGFDFTDTFAPTAKWATLRSVLCLAALEDLELESVDISSAFLNGELEEEVYMEQPP 182          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 128 bits (322), Expect = 3.860e-29
Identity = 70/144 (48.61%), Postives = 94/144 (65.28%), Query Frame = 0
Query:  193 NLTEAESKGEPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLP 336
            NL E   KGEP S  EA+KGPE EKW+ A+ EE +A+  N TW       LP GR+ I  KWIFK+KL E+G+V  YK RLVA+G+SQ EG  + ET APV R   +R++   AA + +E+   D+  A+LN  +EEE+F++LP
Sbjct:  542 NLVE---KGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVK--NLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEEIFMELP 680          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 125 bits (313), Expect = 2.280e-28
Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = 0
Query:  210 LKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPP 337
            +KGPEAE W+AAM++E  +L +NGTW+  D   LP GRKA+  KWIFKRKL EDG+V  YK RLVAQGF+Q  G  + E  APV R    R +  +A++    ++  D+  AYLN  +EE +F++ PP
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPP 125          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE)

HSP 1 Score: 117 bits (293), Expect = 4.440e-28
Identity = 61/138 (44.20%), Postives = 88/138 (63.77%), Query Frame = 0
Query:  202 EPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPEL 339
            +P +  +AL+ P AE W+ AM EE+ +L  N TW   D    P G+  + ++W+F+ KLK DG+V   K RLVA+GF+Q+ G  + ET   VAR+S IR V  LAAE + ELE  D   AYLN  +EEE+++++P E+
Sbjct:   16 DPMTPKQALESPYAEDWKKAMLEEYNSLEKNKTWTLVD---RPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVPKEI 150          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A6V7JMB6_9HYME (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JMB6_9HYME)

HSP 1 Score: 115 bits (288), Expect = 2.070e-27
Identity = 62/136 (45.59%), Postives = 82/136 (60.29%), Query Frame = 0
Query:  202 EPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPP 337
            EP S  EA+ GP+AEKWR AM+EE  +L+ N TW  +   +LP G+ A+  KW+FK K   DG    YK RLVAQGFSQ  G  + E  APV R +  R +  +A    F ++  D   A+LN  +EEE+F+K PP
Sbjct:   34 EPISYEEAMDGPDAEKWRIAMDEELNSLMSNNTWSVQ---QLPKGKSAVGCKWVFKIKRHADGRPDRYKARLVAQGFSQKFGTDYNEVFAPVVRHATFRMLLSIAVHRKFVVKHFDAKTAFLNGKLEEEIFMKQPP 166          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 118 bits (295), Expect = 5.450e-27
Identity = 60/134 (44.78%), Postives = 90/134 (67.16%), Query Frame = 0
Query:  203 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLP 336
            P +  EA++   A KW+ A E E ++L+DN TW   D   LP GRKAI  KW+FK K K DGS+  YK RLVA+G+SQ  G  + ET  PVA+ + IR +  LAA+H+ EL+  D++ A+LN+ ++E++++++P
Sbjct:   45 PSTYQEAMESDNASKWKDACESEIKSLLDNKTW---DVVELPQGRKAIGCKWVFKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIP 175          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: I1PI69_ORYGL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1PI69_ORYGL)

HSP 1 Score: 117 bits (293), Expect = 1.130e-26
Identity = 55/134 (41.04%), Postives = 88/134 (65.67%), Query Frame = 0
Query:  203 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLP 336
            PKS +EA   P+A+ W+ A+  E ++++ NGTWE  +    P G K +  KW+FK+KL+ DG++  YK RLVA+G++Q EGE FF+T +PVAR++ +R +  LA  H   +   D+  A+LN  ++EE+++  P
Sbjct:  184 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE---RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQNEGEDFFDTYSPVARLTTVRVLLSLATSHGLLVHQMDVKTAFLNGELDEEIYMDQP 314          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: Q7Y1L4_ORYSJ (Putative polyprotein n=3 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7Y1L4_ORYSJ)

HSP 1 Score: 121 bits (303), Expect = 1.660e-26
Identity = 63/154 (40.91%), Postives = 96/154 (62.34%), Query Frame = 0
Query:  183 MRVAKVKGTGNLTEAESKGEPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLP 336
             RVAK  G  N+      G P++  EA   P+A+ W+ A+  E ++++ NGTWE  +    P G K +  KW+FK+KL+ DG++  YK RLVA+G++Q EGE FF+T +PVAR++ IR +  LAA H   +   D+  A+LN  +EEE+++  P
Sbjct: 1089 QRVAKSFGDDNIVYLVD-GTPRTIEEAYSSPDADHWKEAVRSEMDSIMSNGTWEVVE---RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQP 1238          
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: I1PQ20_ORYGL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1PQ20_ORYGL)

HSP 1 Score: 119 bits (299), Expect = 2.080e-26
Identity = 57/134 (42.54%), Postives = 89/134 (66.42%), Query Frame = 0
Query:  203 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLP 336
            PKS +EA   P+A+ W+ A+  E ++++ NGTWE  +    P G K +  KW+FK+KL+ DG++  YK RLVA+G++Q EGE FF+T +PVAR++ IR +  LAA H   +   D+  A+LN  ++EE+++  P
Sbjct:  184 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE---RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQP 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7K416_LASNI1.210e-3048.61Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A0C9UNN1_SPHS42.150e-2947.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7KM48_LASNI3.860e-2948.61Integrase catalytic domain-containing protein n=2 ... [more]
A0A182GIT5_AEDAL2.280e-2849.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9Y7J8_LYGHE4.440e-2844.20Retrovirus-related Pol polyprotein from transposon... [more]
A0A6V7JMB6_9HYME2.070e-2745.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0WHK2_9STRA5.450e-2744.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
I1PI69_ORYGL1.130e-2641.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q7Y1L4_ORYSJ1.660e-2640.91Putative polyprotein n=3 Tax=Oryza sativa subsp. j... [more]
I1PQ20_ORYGL2.080e-2642.54Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 243..337
e-value: 3.9E-24
score: 85.6
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 83..337
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 83..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9574contigH-paniculata_contig9574:6691..7819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9574.17284.1mRNA_H-paniculata_contig9574.17284.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9574 5523..8225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9574.17284.1 ID=prot_H-paniculata_contig9574.17284.1|Name=mRNA_H-paniculata_contig9574.17284.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp
MARHQSWTTFASSAARRMLCSSRSRDASLTTKHGRGCFWGTTRTTRVITY
KNPENKSVQLSRKVRFDEEDFVTGHRGQQEHDGTRNMEHFFQHRQSRQRS
LDPAPEVSKQAYDDDGESNGDSKTKDAEPAVEDAPSAGTAAPASRGNTTK
QSGMEAQRPRDRSPIRTRARARENCEQDPGATMRVAKVKGTGNLTEAESK
GEPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAI
RTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIR
SVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like