mRNA_H-paniculata_contig9574.17284.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU) HSP 1 Score: 261 bits (666), Expect = 3.480e-69 Identity = 151/372 (40.59%), Postives = 220/372 (59.14%), Query Frame = 2 Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVG-HRENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVL--GNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITFGG 2119 P + EA PE E WRAA+EEE + L DN +E+ +P+G K I +K + + K ++G + YK+R+VA+GF+Q G + + APVA + +R + LAA +D EL+ D+ AYLN ++EEL++ +PP+ + + RL++SL GLKQ+GR WN TLD L G+G NR +++CLY RDD G+ LV VYVDDL++ R +D++K ++ +F+M +G S +LG +RRDRP I +SQ YI VL RYG +C+ TP+ VK SA D+P + +L S+ G S Y ++GS+MYA GTRPD+AY V R +P R + KR RYL D+ + F G Sbjct: 983 PSTLREAFSTPEGEHWRAALEEELQNLRDNCVYETVP---IPSGVKPITSKPVLRVKFDKNGGIERYKIRIVARGFTQKPGIDYQDVFAPVANLESVRIILALAARYDLELDQMDVSAAYLNGELDEELYL-MPPD--GVAIEPGHCWRLKRSLYGLKQAGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSA----DDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANPKRCHWEMAKRGLRYLKATRDMELRFDG 1343
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 243 bits (621), Expect = 2.010e-66 Identity = 140/373 (37.53%), Postives = 216/373 (57.91%), Query Frame = 2 Query: 1004 KGEPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHREN-VDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITFGG 2119 K EP++ EAL P+ KW AME+E E+L N W + LP RKA+ +KW+F+ K DG+V +K RLVAQGFSQ G+ + ET +PVAR +R+V LAA+H +L D+ A+LN ++EE+++K P + V RLR+S+CGLKQS R WN+ LD L +G ++T D C+Y +++GGE ++AVYVDD+++ G + ++++K ++++F+M+ +G LG +V + + I I Q +Y + VL+R+G + TPV K+ ++ D+ + + Y+ VG L+Y ST TRPD+AY V AR P E + KRI RYL+ D+G+ + G Sbjct: 127 KNEPRTVKEALSSPQKTKWVKAMEKEMESLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKE-HLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLK--KAADDSQRVDQV--------NYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDG 483
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA) HSP 1 Score: 252 bits (643), Expect = 2.360e-66 Identity = 141/369 (38.21%), Postives = 215/369 (58.27%), Query Frame = 2 Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPF-VRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHREN-VDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113 P++ EAL+G A+ W+ +M E+ AL+ N TW D LPAG K I +KW+F+ K ++G + +K RLVA+G Q G ++ET +PV R IR +F +AAE + D+ AYLN+ ++EE++++ P S + P V +L+K++ GLKQSGR WNNTLD+ L +G RS ++CLY + G + +AVYVDDL+I+ EN + +K IS +F M GSLS LG E++RD G +++ Q +YIR +LK YG CR V TP++ + + + V N T+Y+ ++GSLMY + +RPD+ + V + ++R +P+ E K I RYLS +L I + Sbjct: 818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNF--ISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDS----------CVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY 1169
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 242 bits (618), Expect = 7.080e-66 Identity = 136/370 (36.76%), Postives = 215/370 (58.11%), Query Frame = 2 Query: 1010 EPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHR-ENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVK-ISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113 EP + +EAL GP AE+W AM++E ++L ++ WE + LP RKA+ KW+FK K DGS+ +K RLVAQGFSQ G + ET +PV R IR+V L+ + +L D+ A+LN +E+E+++K P + +L KSL GLKQS R WN+ LD+ L IG ++ +D C+Y +DG +VA++VDD+++ G E + +K +I++RF+++ +G L +LG +V ++ + + I Q +Y ++K+YG C+ V TPV+ K +SA E ++ L N E++ VGSL+Y S+ TRPD+ + V+ A+ +P E + KRIFRYL + G+ + Sbjct: 145 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSE-----------LFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLY 495
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3) HSP 1 Score: 250 bits (638), Expect = 8.410e-66 Identity = 145/371 (39.08%), Postives = 210/371 (56.60%), Query Frame = 2 Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHR-ENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNS-LGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITFGG 2119 P+S EA PE E W A+ EE+ L TWE +D LP RKAI +W+F RK E+G + YK RLVAQGFSQ+ G F T APV R +R++ +AA + E++ D+ AYLN + EE+F++ P F V RL+K+L GLKQSGR WN LD L + ++S D C+Y R + G T+ + V+VDDL+I + + ++++K + + F + +G ++G EV+RDR TI++ Q SY+ +LK+YG CR V TP++ V ++ D EP LG Y VGSLMYA+ GTRPD+AY V + ++ +P + KR+FRYL+ D + +GG Sbjct: 728 PQSINEAKASPEWEHWEKAINEEYSLLEGMETWELDD---LPPERKAIGCRWVFLRKYNENGEIIRYKARLVAQGFSQIPGMDFDGTFAPVMRHDSLRALLAIAAIKNLEIQQLDVKGAYLNGDLREEIFMRQP---DGFHDGTSKVCRLKKTLYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYI-RTENGHTSY-ITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKKYGMENCRPVSTPMDPNVVLTRVNENDVKDEPREDRDERLGG--RYAAAVGSLMYAAIGTRPDIAYAVQKLSKYSSNPGNSHWTALKRVFRYLAGTRDRVLFYGG 1088
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: W8AQS8_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8AQS8_CERCA) HSP 1 Score: 236 bits (603), Expect = 1.840e-65 Identity = 136/368 (36.96%), Postives = 205/368 (55.71%), Query Frame = 2 Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIV-GHRENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113 P+ EAL A+ W AM+ E+EAL+ N TWE + LP G+K +R KWIF K +DG+V +K RLVA+G SQV G + ET +PV R + IR +F LAAE+ L D+ AYLN+ + E++++ PE+ + +L+K+L GLKQSGR WN LD L IG + ++ C+Y + ++AVYVDDL+I N++++KH ISQ ++ G + L E+ RD G I ISQ +IR++L+ Y CR + P++ +I+ E T ++ Y+ ++GSLMY + TRPD+ ++V + A+R DP+ E KR+ RYL T D + + Sbjct: 9 PEIVDEALSNEFADNWYEAMKVEYEALLKNKTWELAE---LPKGQKRVRNKWIFAIKRNKDGNVERFKARLVAKGCSQVYGVNYTETFSPVVRYNTIRMIFALAAEYGLHLHQMDVSTAYLNSELVEDIYM-CQPEMFVDQRFPDYCLKLKKALYGLKQSGRQWNIKLDTILKRIGFKQCESEPCVYVKHKV--KQMSIIAVYVDDLLIACSDYNNMNNIKHMISQEVQVVDKGPVQHFLSMEIERDGETGAIAISQQGHIRKLLREYNMENCRPIGIPLDPGHQINCDEKTCKKAD----------QVRYQSLIGSLMYLAVCTRPDILHSVCKLAQRNNDPHMEHLAAAKRVLRYLCTTKDKQLRY 360
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 243 bits (619), Expect = 2.500e-65 Identity = 137/369 (37.13%), Postives = 214/369 (57.99%), Query Frame = 2 Query: 1010 EPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGH-RENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113 +P + EAL PEA+ W+ AM+EE E+ N TW +LP G++AI TKW+FK K +G++ YK RLV +G SQ +G + ET +PV R + +R +F +AA+HD + D A+LN ++EE+F+K P S S V RL KSL GLKQ+ + WN+ L++ L+ +GL RS D C+YF + + + VA+YVDD+++ + ++ +K+ +S + +M+ +GS S VLG V+RD I + Q YI VLKR+G ++C V TP++ K++ + E + V Y VGSL+YA+ TRPD+++ V+ +R ++P + + KR+ RYL + GI F Sbjct: 232 DPVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNS---GRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKV-----PYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVF 587
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: B6V6Z8_DROME (Polyprotein n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=B6V6Z8_DROME) HSP 1 Score: 248 bits (632), Expect = 6.050e-65 Identity = 137/372 (36.83%), Postives = 217/372 (58.33%), Query Frame = 2 Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPP----ELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHREN-VDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113 P+ +AL+G A+ W+ +M++E++ALV N TW D LP G+KAI +KW+F+ K ++G++ +K RLVAQG Q G + ET +PV R IR +F +AAE + D+ AYLN ++EE++++ P E P V +L+K++ GLKQSGR WN+TLD+ L IG RS ++CLY + + + +AVYVDDL+I+ + EN + +K I+ +F + G L+ LG E++R+ G+I++ Q +I +L +YG CR TP++ K+ + V N T+++ ++GSLMY + +RPD+ +TV + ++R DP+ ED K + RYLS DL IT+ Sbjct: 809 PQCVGDALRGEHAQDWKTSMQKEYDALVSNNTWTLCD---LPPGQKAIGSKWVFRVKRDKEGNIQKFKSRLVAQGCGQKMGVNYSETFSPVIRYETIRMLFAIAAEKQLCMHQVDISNAYLNGRLQEEVYMRQPQNFIDEKHPNK-----VLKLQKAIYGLKQSGRVWNDTLDEVLKSIGFKRSKNEACLYAKQQQ--QQHSYIAVYVDDLIIISYDENEISAIKRKIANKFDIHDGGQLNYFLGMEIQRESTRGSISLCQKQFIINLLDKYGMQNCRPAATPLDPGYKMGC----------RNENCVKVNITQFQSLIGSLMYLAVLSRPDILHTVSKLSQRNTDPHSEDETAAKHVLRYLSATVDLKITY 1160
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 247 bits (631), Expect = 9.290e-65 Identity = 142/368 (38.59%), Postives = 214/368 (58.15%), Query Frame = 2 Query: 1013 PKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHR-ENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVKISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113 P+S AEA PE +W+ AM+EE + + GT+ ED LPAGR I KW+F +K EDG+++ YK RLVAQG+SQ+ G + ET APV R+ +R+ +AA D E+ D+ AYLN +EEE++++ P S V RLRK+L GLKQSGR WN D L IG ++ D C+Y +G T ++ V+VDDL+I E++ + K + F ++ +G +++G E++RDR NGTI++SQ YI VL R+G R V TP++ V I + D ++P +G Y+ ++GSL+YA+ GTRPD+++ V + + +P E + KR+ RYL+ +L + F Sbjct: 879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGS---GRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNV-ILKKRTDDLVADPAMVGG-------YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVF 1230
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 245 bits (625), Expect = 4.300e-64 Identity = 138/370 (37.30%), Postives = 216/370 (58.38%), Query Frame = 2 Query: 1010 EPKSAAEALKGPEAEKWRAAMEEEWEALVDNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVACYKVRLVAQGFSQVEGEKFFETSAPVARMSMIRSVFCLAAEHDFELEGTDLDVAYLNAPVEEELFVKLPPELSPFS*DIPFVRRLRKSLCGLKQSGRNWNNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETNLLVAVYVDDLVIVGHR-ENVDDLKHNISQRFRMEGVGSLSRVLGKEVRRDRPNGTITISQGSYIREVLKRYGFNECRGVPTPVEGKVK-ISAPESTDNPSEPNSLGSVLGNSTEYRGMVGSLMYASTGTRPDVAYTVHQAARRMEDPYREDFGTCKRIFRYLSTVPDLGITF 2113 EP + +EAL GP AE+W AM++E ++L ++ WE + LP RKA+ KW+FK K DGS+ +K RLVAQGFSQ G + ET +PV R IR+V L+ + +L D+ A+LN +E+E+++K P + V +L KSL GLKQS R WN+ LD+ L IG ++ +D C+Y +DG +VA++VDD+++ G E + +K +I++RF+++ +G L +LG +V ++ + + I Q +Y ++K+YG C+ V TPV+ K +SA E ++ L N EY+ VGSL+Y S+ TRPD+ + V+ A+ +P E + KRIFRYL + G+ + Sbjct: 759 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSE-----------LFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLY 1109 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9574.17284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9574.17284.1 >prot_H-paniculata_contig9574.17284.1 ID=prot_H-paniculata_contig9574.17284.1|Name=mRNA_H-paniculata_contig9574.17284.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp MARHQSWTTFASSAARRMLCSSRSRDASLTTKHGRGCFWGTTRTTRVITYback to top mRNA from alignment at H-paniculata_contig9574:5523..8225- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9574.17284.1 ID=mRNA_H-paniculata_contig9574.17284.1|Name=mRNA_H-paniculata_contig9574.17284.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2703bp|location=Sequence derived from alignment at H-paniculata_contig9574:5523..8225- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9574:5523..8225- >mRNA_H-paniculata_contig9574.17284.1 ID=mRNA_H-paniculata_contig9574.17284.1|Name=mRNA_H-paniculata_contig9574.17284.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2064bp|location=Sequence derived from alignment at H-paniculata_contig9574:5523..8225- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |