prot_H-paniculata_contig9573.17283.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig9573.17283.1
Unique Name	prot_H-paniculata_contig9573.17283.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	149

Homology

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: A0A6H5L521_9PHAE (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L521_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 9.230e-75
Identity = 116/145 (80.00%), Postives = 126/145 (86.90%), Query Frame = 0

Query:    4 VPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDEL--RLIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEVRQYFDTG 146
            VPY REG+ VA+WMPVSQ LQQSRIIMVG  + +E   +LIAMLLYHEK +P KK+SLYFNCPGALIRPALAVYDTLMHM PE+STLNLGLATGMVSFLCAAG +GQRYALPN+RFLMQRTGMED YQGQASDIGVEV    D G
Sbjct:   78 VPYTREGSTVATWMPVSQCLQQSRIIMVGKFIDEEYANQLIAMLLYHEKNDPNKKISLYFNCPGALIRPALAVYDTLMHMGPELSTLNLGLATGMVSFLCAAGKRGQRYALPNSRFLMQRTGMEDPYQGQASDIGVEVGAKRDEG 222

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: D7FM45_ECTSI (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM45_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 2.110e-73
Identity = 113/139 (81.29%), Postives = 125/139 (89.93%), Query Frame = 0

Query:    4 VPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDEL--RLIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEVR 140
            VPY R+G+ VA+WMPVSQ LQQSRIIMVG  + +E   +LIAMLLYHEK +P KK+SLYFNCPGALIRPALAVYDTLMHM PE+STLNLGLATGMVSFLCAAG +GQRYALPN+RFLMQRTGMED YQGQASDIGVEV+
Sbjct:    8 VPYTRDGSTVATWMPVSQCLQQSRIIMVGKFIDEEYANQLIAMLLYHEKNDPNKKISLYFNCPGALIRPALAVYDTLMHMGPELSTLNLGLATGMVSFLCAAGKRGQRYALPNSRFLMQRTGMEDPYQGQASDIGVEVQ 146

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: A0A835YH32_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH32_9STRA)

HSP 1 Score: 191 bits (485), Expect = 5.980e-58
Identity = 97/147 (65.99%), Postives = 116/147 (78.91%), Query Frame = 0

Query:    3 QVPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDEL--RLIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEVRQYFDTGN 147
            QVPYK  G+  A+W+ V+QRLQ+SRI+MVG  + DE   +LIAM+LY EKE+  K VSLYFN PGA +RPA+AV+DT+  M    STLNLGLATGMVSFLCAAG +G+R+ALPNARFLMQRTGMED Y+GQASDIG+EV Q     N
Sbjct:   54 QVPYKPPGSDQATWVGVNQRLQRSRILMVGKFIDDEYANQLIAMMLYLEKESRDKPVSLYFNSPGANLRPAMAVFDTMQQMAFPTSTLNLGLATGMVSFLCAAGDKGKRFALPNARFLMQRTGMEDAYRGQASDIGIEVGQMVKKNN 200

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: F0Y3R0_AURAN (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3R0_AURAN)

HSP 1 Score: 160 bits (406), Expect = 8.690e-47
Identity = 81/140 (57.86%), Postives = 107/140 (76.43%), Query Frame = 0

Query:    4 VPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDELR--LIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEVRQ 141
            VPY+  G+    ++ + QRL + RI++VG+ L +E    LIA+LLY   E+P K +S+YFN PGAL++P LAVYDTL  +   V+T+NLGLATGM +FLC AGT+G RYALPNARFLMQRTG++D +QGQASDIG+ VR+
Sbjct:   34 VPYQPPGSDSHMFVDIYQRLYRDRIMLVGNFLDEEQANSLIAVLLYLRFEDPKKPISIYFNVPGALMKPCLAVYDTLQTLECPVTTVNLGLATGMGAFLCGAGTKGCRYALPNARFLMQRTGLDDPFQGQASDIGLVVRE 173

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: A0A7S2BG56_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BG56_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.110e-46
Identity = 77/138 (55.80%), Postives = 109/138 (78.99%), Query Frame = 0

Query:    4 VPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDEL--RLIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEV 139
            VP+K +G +   ++P+SQRL + RI+++G+ L +E    LIA+LLY ++++P K++SLYFN PGAL++P LAVYDTL  M   + TLNLGLATGM +FLC+AGT G R+ LPNARFL+Q+TG++D +QGQA DIG++V
Sbjct:   64 VPWKPQGMESHQFVPISQRLYRERIVILGNFLDEEAANNLIAVLLYMKQDDPNKQISLYFNVPGALLKPTLAVYDTLKSMECPIMTLNLGLATGMGAFLCSAGTPGLRFCLPNARFLLQKTGLDDPFQGQAVDIGLKV 201

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: A0A8J2SWQ7_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWQ7_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.320e-46
Identity = 84/145 (57.93%), Postives = 107/145 (73.79%), Query Frame = 0

Query:    1 ISQVPYKREGAQVASWMPVS--QRLQQSRIIMVGSELPDELR--LIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEVRQ 141
            + QVPY   GA+    M V   Q L + RI++VG+ L +E    LIA+LL+   E+P K +S+YFN PGAL++P LAVYDTL  +   V+T+NLGLATGM +FLC AGT+G RYALPNARFLMQRTG++D YQGQASDIG+ VR+
Sbjct:   40 VPQVPYSPPGAEQGQHMYVDIYQALYRDRIMLVGNFLDEEQANSLIALLLFMRFEDPRKPISIYFNVPGALMKPCLAVYDTLRTLECPVTTVNLGLATGMGAFLCGAGTKGMRYALPNARFLMQRTGLDDPYQGQASDIGLMVRE 184

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: A0A6U3QDB9_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QDB9_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.370e-46
Identity = 79/138 (57.25%), Postives = 106/138 (76.81%), Query Frame = 0

Query:    4 VPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDEL--RLIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEV 139
            VPY     +   ++P+SQRL   R+I++GS L +E    LIA LLY +KE+  KK+SLY N PGAL++P+LAVYDTL  ++  ++TLNLGLATGM +FLC AGT+G R+ALPNARFL+Q+TG++D YQGQA DIG++V
Sbjct:   65 VPYSPSAVEGHQYLPISQRLLMDRVIVLGSFLDEEQANNLIATLLYLQKEDREKKISLYMNIPGALLKPSLAVYDTLKSLKCPITTLNLGLATGMGAFLCGAGTKGYRFALPNARFLLQKTGLDDPYQGQAVDIGLKV 202

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: A0A7S3K3R8_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3R8_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.080e-44
Identity = 74/143 (51.75%), Postives = 104/143 (72.73%), Query Frame = 0

Query:    1 ISQVPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDEL--RLIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEVRQ 141
            + QVPY+  G     W  + QRL + R+++V + + ++    LIA LLY + ++P K +S+YFN  GAL++P LAVYDT+  +   +ST+NLGLATGM +FLC AGT+G RY+LPNARFLMQRTG++D YQGQA+DIG+ V +
Sbjct:   45 VPQVPYQPPGTDYIMWTDIYQRLYRDRVLLVSNFIDEDKANNLIATLLYLKYDSPSKPISIYFNVAGALMKPCLAVYDTIRTLDCPISTVNLGLATGMGAFLCGAGTKGMRYSLPNARFLMQRTGLDDPYQGQATDIGLIVSE 187

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: A0A0G4ERW5_VITBC (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ERW5_VITBC)

HSP 1 Score: 153 bits (386), Expect = 8.570e-44
Identity = 73/143 (51.05%), Postives = 105/143 (73.43%), Query Frame = 0

Query:    3 QVPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDEL--RLIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEVRQYF 143
            QVPYK  G+   +W+ ++ RL + R+I VG  L +E   ++IA LLY   E+  + +SLY N PGAL++P+LA+YD ++ +   +STLNLGLATGM +FLCAAGT GQR+ LPNARFLMQ+TGME+  +GQA+D+ ++V + +
Sbjct:    8 QVPYKPPGSDFYTWVDLNTRLLRDRVIFVGRFLDEEAANQIIATLLYLRSEDSTRPISLYMNVPGALMKPSLAIYDAMIGVECPISTLNLGLATGMGAFLCAAGTPGQRFCLPNARFLMQKTGMEEGMRGQATDLAIDVAENY 150

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BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Match: A0A7S2KWW7_9STRA (ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWW7_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.490e-43
Identity = 74/140 (52.86%), Postives = 106/140 (75.71%), Query Frame = 0

Query:    4 VPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDEL--RLIAMLLYHEKENPGKKVSLYFNCPGALIRPALAVYDTLMHMRP--EVSTLNLGLATGMVSFLCAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEV 139
            VP++  G+  A ++ +  RL + RI+++G  +  +   ++I++LLY +KE+P KK++LYFNCPGA +RPALAVYDT+M  +   ++STLNLGLATGM S LC  GT+G R A+PN+RFL+QR G+E  +QGQASDIG+EV
Sbjct:   68 VPWQPPGSDYAQFVDIYSRLYRERIMLIGKFIDQQEANQIISILLYLKKEDPDKKITLYFNCPGAELRPALAVYDTIMQCKETCDISTLNLGLATGMASLLCGCGTKGMRAAMPNSRFLLQRVGLERPFQGQASDIGLEV 207

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig9573.17283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L521_9PHAE	9.230e-75	80.00	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
D7FM45_ECTSI	2.110e-73	81.29	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A835YH32_9STRA	5.980e-58	65.99	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
F0Y3R0_AURAN	8.690e-47	57.86	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S2BG56_9STRA	1.110e-46	55.80	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A8J2SWQ7_9STRA	1.320e-46	57.93	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A6U3QDB9_9STRA	1.370e-46	57.25	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S3K3R8_9STRA	1.080e-44	51.75	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A0G4ERW5_VITBC	8.570e-44	51.05	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
A0A7S2KWW7_9STRA	2.490e-43	52.86	ATP-dependent Clp protease proteolytic subunit (Fr...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 56..76 score: 36.55 coord: 108..127 score: 27.25 coord: 87..104 score: 43.61 coord: 18..33 score: 29.53
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 15..141 e-value: 7.7E-29 score: 100.9
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 18..141
None	No IPR available	GENE3D	3.90.226.10		coord: 2..145 e-value: 5.3E-27 score: 96.7
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 15..141

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig9573	contig	H-paniculata_contig9573:3703..4831 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig9573.17283.1	mRNA_H-paniculata_contig9573.17283.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig9573 3703..4831 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig9573.17283.1 ID=prot_H-paniculata_contig9573.17283.1|Name=mRNA_H-paniculata_contig9573.17283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
ISQVPYKREGAQVASWMPVSQRLQQSRIIMVGSELPDELRLIAMLLYHEK
ENPGKKVSLYFNCPGALIRPALAVYDTLMHMRPEVSTLNLGLATGMVSFL
CAAGTQGQRYALPNARFLMQRTGMEDVYQGQASDIGVEVRQYFDTGNW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001907	ClpP
IPR023562	ClpP/TepA
IPR029045	ClpP/crotonase-like_dom_sf