Homology
BLAST of mRNA_H-paniculata_contig9566.17279.1 vs. uniprot
Match:
D8LQC7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC7_ECTSI)
HSP 1 Score: 164 bits (415), Expect = 3.470e-48
Identity = 76/129 (58.91%), Postives = 101/129 (78.29%), Query Frame = 0
Query: 1 MECLQYSRAVRVLAVLSAVVLIYGASAFNLRPLILMLWGPIAGYVASTFKLRATYAFLFFYSLRVSWDMGWLISGGENWIVVWVFLFTDAASLGLVCLYARVLRMCTSADLQRLRGPQTLWRSGFFPLN 129
M C +YSR VRVLA+L A++++ GASAF PLILM+WGPIAGY+AS F+LRA + FLF+Y LR+SWD+GW++SGG W+VVWVFLFTD A+ GLV + +L C++A+++ LR P T W S FFPL+
Sbjct: 92 MACHRYSRVVRVLAILDAIIVLCGASAFT--PLILMIWGPIAGYLASNFRLRAAFTFLFYYGLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEVEHLRDPNTAWASAFFPLS 218
BLAST of mRNA_H-paniculata_contig9566.17279.1 vs. uniprot
Match:
A0A6H5KAV0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAV0_9PHAE)
HSP 1 Score: 57.4 bits (137), Expect = 5.460e-7
Identity = 39/129 (30.23%), Postives = 71/129 (55.04%), Query Frame = 0
Query: 1 MECLQYSRAVRVLAVLSAVVLIYGASAFNLRPLILMLWGPIAGYVAST-FKLRATYAFLFFYSLRVSWDMGWLISGGENWIVVWVFLFTDAASLGL---VCLYARVLRMCTSADLQRLRGPQTLWRSGF 125
ME ++ +R LAV ++L+ F + L+L+LWGP++G++A T + TYA+ +Y LR+S + ++ G W F+F A SL + + +A+VL + A++++LR P +W +
Sbjct: 101 MEASSLAKTIRWLAVFDGLILVINCGYFPML-LLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEG-----YFW-FIFLFALSLYIARVIWRFAKVLDTLSPAEIEQLRNPTAVWSGQY 222
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9566.17279.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M E C L Q Y S R A V R V L A V L S A V V L I Y G A S A F N L R P L I L M L W G P I A G Y V A S T F K L R A T Y A F L F F Y S L R V S W D M G W L I S G G E N W I V V W V F L F T D A A S L G L V C L Y A R V L R M C T S A D L Q R L R G P Q T L W R S G F F P L N T P L A R G P L A Q G R A R S I P T S D D A A V L * 20 40 60 80 100 120 140 Expect = 3.47e-48 / Id = 58.91 Expect = 5.46e-7 / Id = 30.23 Sequence D8LQC7_ECTSI A0A6H5KAV0_9PHAE
Match Name E-value Identity Description
D8LQC7_ECTSI 3.470e-48 58.91 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more] A0A6H5KAV0_9PHAE 5.460e-7 30.23 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M E C L Q Y S R A V R V L A V L S A V V L I Y G A S A F N L R P L I L M L W G P I A G Y V A S T F K L R A T Y A F L F F Y S L R V S W D M G W L I S G G E N W I V V W V F L F T D A A S L G L V C L Y A R V L R M C T S A D L Q R L R G P Q T L W R S G F F P L N T P L A R G P L A Q G R A R S I P T S D D A A V L * 20 40 60 80 100 120 140 Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence TRANSMEMBRANE TRANSMEMBRANE TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 37..60 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 12..30 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 80..103 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 61..79 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..11 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 104..154 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 31..36 None No IPR available TMHMM TMhelix coord: 13..35 None No IPR available TMHMM TMhelix coord: 81..103
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_H-paniculata_contig9566.17279.1 ID=prot_H-paniculata_contig9566.17279.1|Name=mRNA_H-paniculata_contig9566.17279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp back to top