prot_H-paniculata_contig9548.17269.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9548.17269.1
Unique Nameprot_H-paniculata_contig9548.17269.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length186
Homology
BLAST of mRNA_H-paniculata_contig9548.17269.1 vs. uniprot
Match: A0A6H5KJ41_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 8.140e-35
Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = 0
Query:    1 MRTLSRLRKDWATLVPIVVHGFVGRMEAERKLQGRDRGTFLLRFSERKVGALVVSFTENVRQAPGSSASSIAHRP-------SICFQHCLVFVGKGGSCKLEVGEAGASVTYSDLHELVMDCERLKTLYPNVPKEQVFGD 133
            M TLS LR DWA+  P  VHGF+ R+ AER+L  R+RGTFLLRFSE + G LVVSFTE+V QA    +S +A  P       S+C +HCLV V +GG C +EV E G+ V Y  LH+LV+ C  ++ LYP+V KE  F +
Sbjct:  135 MTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRDSSMLASAPCSRPRSQSMCVKHCLVEVRRGGWCYIEV-EQGSKVPYPSLHDLVLACSSMEVLYPDVRKEDAFDE 273          
BLAST of mRNA_H-paniculata_contig9548.17269.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.690e-32
Identity = 71/140 (50.71%), Postives = 92/140 (65.71%), Query Frame = 0
Query:    1 MRTLSRLRKDWATLVPIVVHGFVGRMEAERKLQGRDRGTFLLRFSERKVGALVVSFTENVRQAPGSSASSIAHRP-------SICFQHCLVFVGKGGSCKLEVGEAGASVTYSDLHELVMDCERLKTLYPNVPKEQVFGD 133
            M TLS LR DWA+  P  VHGF+ R+ AER+L  R+RGTFLLRFSE + G LVVSFTE+V QA   ++S +   P       S+C +HCLV V +GG C +EV E G+ V Y  LH+LV+ C  ++ LYP+V KE  F +
Sbjct:  804 MPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLTSAPRSRPRSQSMCVKHCLVEVRRGGWCYIEV-EQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDE 942          
BLAST of mRNA_H-paniculata_contig9548.17269.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.200e-23
Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 0
Query:    3 TLSRLRKDWATLVPIVVHGFVGRMEAERKLQGRDRGTFLLRFSERKVGALVVSFTENVRQAPGSSASSIAHRPSICFQHCLVFVGKGGSCKLEVGEAGASVTYSDLHELVMDCERLKTLYPNVPKEQVFGDRVAWEPPT 141
            TL  +R DWA   P+ VHGF+ R+ A+R L  R+ GTFLLRFSE K+GALV+SFT+    +PG        R S+  +H LV V  GG C ++  E G    Y+ LH+ V     LK LYP++PKE+ FG+     P T
Sbjct:  775 TLGIIRNDWARTRPVRVHGFMSRLAAKRLLMQRECGTFLLRFSESKMGALVISFTQP-SVSPG--------RRSLSVKHSLVEVKWGGRCCIQA-EKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAFGETPRSPPAT 903          
BLAST of mRNA_H-paniculata_contig9548.17269.1 vs. uniprot
Match: A0A6H5JPT3_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.310e-20
Identity = 66/174 (37.93%), Postives = 87/174 (50.00%), Query Frame = 0
Query:    1 MRTLSRLRKDWATLVPIVVHGFVGRMEAERKLQGRDRGTFLLRFSERKVGALVVSFTE-NVRQAPGSSAS-------SIAHRPSICFQ-------------------------HCLVFVGKGGSCKLEVGEAGASVTYSDLHELVMDCERLKTLYPNVPKEQVFGDRVAWEPPT 141
            M TL  +R DWAT  P+ VHGF+ R+ ++R L  R+ GTFLLRFSE ++GALV+SFT+ +V  +  S  S       S A R + C Q                         H LV V  GG C ++  E G    Y  LH+ V     LK LYP++PKE+ FG+     P T
Sbjct:  276 MATLGIIRNDWATTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESRMGALVISFTQPSVSVSRLSRISRCLVPFISCAGRLACCLQGSPINPRIVLQQFQLRSGRRSLSVKHSLVEVKWGGRCCIQA-EKGGMRCYGSLHDFVRQIPELKKLYPDIPKEEAFGETPRSPPAT 448          
BLAST of mRNA_H-paniculata_contig9548.17269.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.700e-20
Identity = 59/141 (41.84%), Postives = 73/141 (51.77%), Query Frame = 0
Query:    1 MRTLSRLRKDWATLVPIVVHGFVGRMEAERKLQGRDRGTFLLRFSERKVGALVVSFTENVRQAPGSSASSIAHRPSICFQHCLVFVGKGGSCKLEVGEAGASVTYSDLHELVMDCERLKTLYPNVPKEQVFGDRVAWEPPT 141
            M TL  +R DWA + PI VHGF+GR EA+  L+ +    FLLRFSER  G LVVS                      C  H LV V +GG C +EV + G    Y  LH+LV     L+ LYP++PKEQVF  +    P T
Sbjct:  908 MVTLGNIRNDWARIWPIRVHGFIGRHEAQALLRMKPTA-FLLRFSERHPGKLVVS--------------------RACHHHSLVEVTEGGQCFMEVDKRGTRRKYESLHDLVTQNSLLRQLYPDIPKEQVFKGKAPAAPET 1027          
BLAST of mRNA_H-paniculata_contig9548.17269.1 vs. uniprot
Match: T1KPX0_TETUR (SH2 domain-containing protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KPX0_TETUR)

HSP 1 Score: 58.9 bits (141), Expect = 6.670e-7
Identity = 43/115 (37.39%), Postives = 55/115 (47.83%), Query Frame = 0
Query:   18 VVHGFVGRMEAERKLQGRDRGTFLLRFSERKVGALVVSFTENVRQAPGSSASSIAHRPSICFQHCLVFVGKGGSCKLEVGEAGASVTYS-DLHELVMDCERLKTLYPNVPKEQVF 131
            ++HGF+ R +AE  L  +  GTFLLRFSE+K+GA+                 SIA R    F          G+    V     +  YS  L E +    RLK LYPN+PKEQVF
Sbjct:  437 LIHGFISRKDAEDALMDKPEGTFLLRFSEKKLGAI-----------------SIACRAHSTF----------GNSVYMVEPYSLNDLYSVSLSERIHYTRRLKYLYPNIPKEQVF 524          
BLAST of mRNA_H-paniculata_contig9548.17269.1 vs. uniprot
Match: A0A7M4EWV7_CROPO (Signal transducer and activator of transcription n=1 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4EWV7_CROPO)

HSP 1 Score: 53.1 bits (126), Expect = 6.690e-5
Identity = 35/125 (28.00%), Postives = 57/125 (45.60%), Query Frame = 0
Query:   18 VVHGFVGRMEAERKLQGRDRGTFLLRFSERKVGALVVSFTENVRQAPGSSASSIAHRPSICFQHCLVFVGKGGSCKLEVGEAGASVTYSDLHELVMDCERLKTLYPNVPKEQVFGDRVAWEPPTP 142
            ++ GF+ +    R L     GTFLLR+S+ ++G + +++    R   GS             ++   F  K  S +              L + + D  +L+ LYPN+PK+Q FG+    EPPTP
Sbjct:  511 LIRGFISKQYVSRLLSTAPDGTFLLRYSDSEIGGVTIAYL--ARAEDGSWQ----------VENIQPFSAKDLSIR-------------SLGDRIRDLVQLRNLYPNIPKDQAFGNHYNSEPPTP 610          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9548.17269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KJ41_9PHAE8.140e-3551.43SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNX8_ECTSI1.690e-3250.71SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY4_ECTSI1.200e-2344.60SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPT3_9PHAE1.310e-2037.93SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KC67_9PHAE2.700e-2041.84SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
T1KPX0_TETUR6.670e-737.39SH2 domain-containing protein n=1 Tax=Tetranychus ... [more]
A0A7M4EWV7_CROPO6.690e-528.00Signal transducer and activator of transcription n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000980SH2 domainSMARTSM00252SH2_5coord: 16..121
e-value: 0.0056
score: 25.6
IPR000980SH2 domainPFAMPF00017SH2coord: 20..89
e-value: 2.8E-9
score: 36.9
IPR000980SH2 domainPROSITEPS50001SH2coord: 18..112
score: 10.894
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 19..132
e-value: 1.5E-17
score: 65.3
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 19..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9548contigH-paniculata_contig9548:2381..5116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9548.17269.1mRNA_H-paniculata_contig9548.17269.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9548 1674..5210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9548.17269.1 ID=prot_H-paniculata_contig9548.17269.1|Name=mRNA_H-paniculata_contig9548.17269.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=186bp
MRTLSRLRKDWATLVPIVVHGFVGRMEAERKLQGRDRGTFLLRFSERKVG
ALVVSFTENVRQAPGSSASSIAHRPSICFQHCLVFVGKGGSCKLEVGEAG
ASVTYSDLHELVMDCERLKTLYPNVPKEQVFGDRVAWEPPTPISRFSGAF
GGDCSGDGMATTGGGGAPGPAAPVGVGWARYAGPD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
IPR036860SH2_dom_sf