prot_H-paniculata_contig9539.17260.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig9539.17260.1
Unique Name	prot_H-paniculata_contig9539.17260.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	193

Homology

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BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 2.990e-39
Identity = 76/148 (51.35%), Postives = 97/148 (65.54%), Query Frame = 0

Query:   43 MLRRTMYPANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            M+R  + P  AQ A++AVR G M+ R  A  +GV+K S+ RR+ G V+IDA+VG   VLT EEE+ VED +L+AA   +G+ R  L E VR LC+D   + WD    P R WLD FF RH  LSER +RIY+ANRI   DETRL+ FY
Sbjct:    1 MVRSKVDPEQAQKAIEAVRSGAMSLRAAAQAYGVNKRSLSRRLSGDVSIDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFY 148

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BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: A0A6H5JPC4_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC4_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 3.490e-38
Identity = 74/151 (49.01%), Postives = 97/151 (64.24%), Query Frame = 0

Query:   40 LPSMLRRTMYPANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            LPSM R  + P  AQ AVDAVR GQM+ R  A  +G+S+NS+  R+   V IDA+V    VL++EEE+ VED +++A+ R L + R EL + VR +C D  KV+WD +K P   WL  F  RH  L ER + IY+ANRI   DE+RL AFY
Sbjct:   12 LPSMGRTRVDPEQAQKAVDAVRSGQMSVRGAAEAYGLSRNSLHSRLTNKVAIDAKVAPGTVLSKEEEEFVEDVLVYASRRLLLLGRRELKDAVRKICLDGRKVRWDPDKGPGDRWLQWFLKRHPELPERATHIYEANRINEDDESRLEAFY 162

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BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 4.920e-38
Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 0

Query:   43 MLRRTMYPANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            M+R  + P  AQ A++AVR G M+ R  A  +GV+K S+ RR+ G V++DA+VG   VLT EEE+ VED +L+AA   +G+ R  L E VR LC+D   + WD    P R WLD FF RH  LSER +RIY+ANRI   DET L+ FY
Sbjct:    1 MVRSKVDPEQAQKAIEAVRSGAMSLRAAAQAYGVNKRSLSRRLSGDVSMDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDISWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETCLQTFY 148

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BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: A0A6H5JMR3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR3_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 9.300e-38
Identity = 75/158 (47.47%), Postives = 99/158 (62.66%), Query Frame = 0

Query:   33 FQEYPTCLPSMLRRTMYPANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            F  +   L SM R+ + P  AQ AVDAVR G+M+ R  A  +G+   S+  RVK  V IDA+VG   VL++EEED VED +++A+   L + R EL + VR +C+D  KV WD +K P   WL+ F ARH  LSER + IY+ANRI    E RL+AFY
Sbjct:    5 FALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY 162

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BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: A0A6H5LAK0_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAK0_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.010e-35
Identity = 70/141 (49.65%), Postives = 91/141 (64.54%), Query Frame = 0

Query:   50 PANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            P  AQ AVDAVR G+M+ R  A  +G+   S+  RVK  V IDA+VG   VL++EEED VED +++A+   L + R EL + VR +C+D  KV WD +K P   WL+ F ARH  LSER + IY+ANRI    E RL+AFY
Sbjct:   37 PEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY 177

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BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: A0A6H5JH77_9PHAE (S5A_REDUCTASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH77_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 3.950e-35
Identity = 75/158 (47.47%), Postives = 99/158 (62.66%), Query Frame = 0

Query:   33 FQEYPTCLPSMLRRTMYPANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            F  +   L SM R+ + P  AQ AVDAVR G+M+ R  A  +G+   S+  RVK  V IDA+VG   VL++EEED VED +++A+   L + R EL + VR +C+D  KV WD +K P   WL+ F ARH  LSER + IY+ANRI    E RL+AFY
Sbjct:    5 FAPFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY 162

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BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: A0A6H5KQE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE4_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.210e-34
Identity = 75/158 (47.47%), Postives = 99/158 (62.66%), Query Frame = 0

Query:   33 FQEYPTCLPSMLRRTMYPANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            F  +   L SM R+ + P  AQ AVDAVR G+M+ R  A  +G+   S+  RVK  V IDA+VG   VL++EEED VED +++A+   L + R EL + VR +C+D  KV WD +K P   WL+ F ARH  LSER + IY+ANRI    E RL+AFY
Sbjct:    5 FALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY 162

[Close]

BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: A0A6H5L1T0_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T0_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.640e-34
Identity = 75/158 (47.47%), Postives = 99/158 (62.66%), Query Frame = 0

Query:   33 FQEYPTCLPSMLRRTMYPANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            F  +   L SM R+ + P  AQ AVDAVR G+M+ R  A  +G+   S+  RVK  V IDA+VG   VL++EEED VED +++A+   L + R EL + VR +C+D  KV WD +K P   WL+ F ARH  LSER + IY+ANRI    E RL+AFY
Sbjct:    5 FALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY 162

[Close]

BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: A0A6H5KKS3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS3_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 2.630e-33
Identity = 70/151 (46.36%), Postives = 97/151 (64.24%), Query Frame = 0

Query:   40 LPSMLRRTMYPANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            L SM RR +    AQ A +AVRGG M+ R+ A V+ + + S+KRR+ G V +DA+VG   V+++EEE+ +ED +L+A    L VSR  L+E VR+LC D  K  WD EK P ++WL  F  RH  + ER +RIY+ANR+T   E R+  FY
Sbjct:   12 LISMGRRRVDAQQAQKACEAVRGG-MSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDR-KTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFY 160

[Close]

BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Match: A0A6H5JTL4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL4_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 3.290e-32
Identity = 64/148 (43.24%), Postives = 92/148 (62.16%), Query Frame = 0

Query:   43 MLRRTMYPANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIVLTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSPEREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFY 190
            M R  +  A A+ A  AVR G M+    A  FG+SK S+ RR+ G   +DA+VG   VLT+EEE+ +ED +L+A   ++ ++R +L ERVR LC+D   + WD +K P + WL  F  RH  +S R +RIY+ANR+T  ++ RL  FY
Sbjct:    1 MGRSRVDSAAAEKACAAVRNGSMSRYAAAAAFGLSKTSLLRRLSGECDMDARVGHGTVLTKEEENALEDVLLYACRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKSWLQGFLRRHDRISLRLARIYEANRMTSPEDDRLHNFY 148

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig9539.17260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
B2KWI5_ECTSI	2.990e-39	51.35	Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A6H5JPC4_9PHAE	3.490e-38	49.01	HTH psq-type domain-containing protein n=1 Tax=Ect...	[more]
A0A6H5JK80_9PHAE	4.920e-38	50.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMR3_9PHAE	9.300e-38	47.47	HTH psq-type domain-containing protein (Fragment) ...	[more]
A0A6H5LAK0_9PHAE	1.010e-35	49.65	HTH psq-type domain-containing protein (Fragment) ...	[more]
A0A6H5JH77_9PHAE	3.950e-35	47.47	S5A_REDUCTASE domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KQE4_9PHAE	2.210e-34	47.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L1T0_9PHAE	2.640e-34	47.47	Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KKS3_9PHAE	2.630e-33	46.36	HTH psq-type domain-containing protein (Fragment) ...	[more]
A0A6H5JTL4_9PHAE	3.290e-32	43.24	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007889	DNA binding HTH domain, Psq-type	PFAM	PF05225	HTH_psq	coord: 56..90 e-value: 2.1E-6 score: 27.4
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 52..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig9539	contig	H-paniculata_contig9539:3671..4249 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig9539.17260.1	mRNA_H-paniculata_contig9539.17260.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig9539 3163..5802 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig9539.17260.1 ID=prot_H-paniculata_contig9539.17260.1|Name=mRNA_H-paniculata_contig9539.17260.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MSGAQRLSSPLPQLHTVPDLQYHCLSLLPFCEFQEYPTCLPSMLRRTMYP
ANAQGAVDAVRGGQMNYRETATVFGVSKNSIKRRVKGHVTIDAQVGQPIV
LTQEEEDKVEDTMLWAAHRHLGVSRAELMERVRVLCSDDCKVQWDREKSP
EREWLDPFFARHLCLSERRSRIYQANRITVSDETRLRAFYTS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007889	HTH_Psq
IPR009057	Homeobox-like_sf