prot_H-paniculata_contig9526.17253.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9526.17253.1
Unique Nameprot_H-paniculata_contig9526.17253.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length292
Homology
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: D8LI29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI29_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 5.120e-86
Identity = 197/328 (60.06%), Postives = 214/328 (65.24%), Query Frame = 0
Query:    1 DAAIHNHLLALYAQEEEWRELSSTAATDSAHSRVSQPWAVGNKSSGQLGESSQELSSSLRVN-------------------------------------SASSPSALLAFIARPAEERFFDPIFKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 291
            DAAIHNHLLALYAQEEEWRE         +H   S     G K+   + ++ Q LS +  V+                                     +AS  SALLAFIARP EERFFDPIFKREICVSLEEYNGKIE LRKEMEDYTLS+EAVQ EI EL+QRSIYVSSNQTCELC R+ILSTQFYVFPC HAFH +CLL +IRPHLS EQ SAV SL+  IA                XXXXXXX       XXXXXXXXXXXXXXX  D S+RAQHY R+LQ  LDGYVA ECVLCGD+MVQSVDKPLV  EEQ EQ  QWAL
Sbjct:  572 DAAIHNHLLALYAQEEEWRE---------SHRHPSSLSTRGYKALSGVDDAYQALSGAGSVSGSGLTKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASGSSALLAFIARPPEERFFDPIFKREICVSLEEYNGKIESLRKEMEDYTLSSEAVQTEIVELQQRSIYVSSNQTCELCKRNILSTQFYVFPCGHAFHFECLLENIRPHLSVEQRSAVESLVAMIAX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADGSRRAQHYLRSLQTELDGYVAGECVLCGDMMVQSVDKPLVAVEEQAEQMHQWAL 878          
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A6H5L255_9PHAE (Vps39_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L255_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 2.210e-61
Identity = 131/183 (71.58%), Postives = 141/183 (77.05%), Query Frame = 0
Query:  109 MEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 291
            MEDYTLS+EAVQAEI EL+QRSIYVSSNQTCELC R+ILSTQFYVFPC HAFHS+CLL +IRPHLS EQ SAV SL+  IAA               XXXXXXX       XXXXXXXXXXXXX    D S+RAQHY+R+LQ  LDGYVAAECVLCGD+MVQSVDKPLVT EEQ EQ  QWAL
Sbjct:    1 MEDYTLSSEAVQAEIVELQQRSIYVSSNQTCELCKRNILSTQFYVFPCGHAFHSECLLENIRPHLSVEQRSAVESLVKMIAAXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGTDGSRRAQHYRRSLQTELDGYVAAECVLCGDMMVQSVDKPLVTVEEQAEQLHQWAL 173          
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A836CAW5_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW5_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.430e-35
Identity = 87/206 (42.23%), Postives = 111/206 (53.88%), Query Frame = 0
Query:   87 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNH-IRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 291
            FK +IC SLE YN +I  LR EM +YT + EA QAE   L+ R +YV S Q CELCG   L+   Y+FPC+HAFH  CL +H +R +L+P+Q SAV +L+ +IAA + +        A+G                                  KRA     AL++ LDGYVAAEC LCG+ M+ SVDKPLV      E A  WAL
Sbjct:  974 FKADICASLEAYNARIGRLRAEMAEYTAAAEATQAEAAALRARELYVGSAQPCELCGAPALARALYLFPCAHAFHCDCLRDHALREYLTPQQRSAVGTLIQRIAAAEPS-------AATGAAA---------------------------AALPKRAALQLAALRSELDGYVAAECALCGEAMIDSVDKPLVEDGRAAEAAA-WAL 1144          
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A5D6XVF9_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVF9_9STRA)

HSP 1 Score: 134 bits (338), Expect = 9.930e-32
Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 0
Query:   87 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGV------SXXXXXXXXXXXXXXXDVDTSKRAQHYQRAL-QASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 291
            FK+EIC SLE YN +IE L++EM+DYT S E +++++++L++R   VS NQ CEL G++IL  +FY+FPCSHAFH+  L   ++ HL+  Q   V  L+ K+           L            PLS         S                 D +K++   +R + Q  LD  +A+EC+ CG++M++S+  P +TP+++  +  +W +
Sbjct:  853 FKKEICESLEVYNDRIEQLKEEMQDYTQSAELIRSDMQKLRKRCAIVSGNQRCELTGQNILGKEFYLFPCSHAFHATALRQEMQKHLNSFQRQTVKQLIQKL---------NELSVEMPATNKFFQPLSAFAFLNLTSSEKEAMHPDGATSAQSAADAAKQSLAQEREMVQQKLDEIIASECIFCGEVMIKSIHTPFITPDDELSEGAEWKI 1055          
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A4D9CQ63_9STRA (Pep3_Vps18 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ63_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.040e-31
Identity = 77/206 (37.38%), Postives = 118/206 (57.28%), Query Frame = 0
Query:   87 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTP-EEQEEQAGQWAL 291
            FK +IC SL +Y+  I+GL++EME+   ST  +++ +  L+ R + ++++Q C+LC  S+ + QFYVFPC HAFH+ CL +HI P+L+  Q  AV +L +++AA +  G    +G   G        +SQ                       K AQ    ALQ  +DGY+AAEC  CGD+M++S+DKPLV   EE + +A +W +
Sbjct: 1126 FKEKICDSLSQYSSTIQGLKQEMEELAQSTVEMESAVAALRGRHLSIANSQRCDLCRTSVFAHQFYVFPCQHAFHATCLAHHILPYLNTSQRRAVQALQEQLAA-EYFGFNEGIG---GGVRGTGGKMSQ----------------------RKAAQ--VEALQGEIDGYLAAECPFCGDVMIRSIDKPLVGEGEEAKAEAEEWEI 1303          
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: D8M6Q2_BLAHO (RING-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M6Q2_BLAHO)

HSP 1 Score: 131 bits (330), Expect = 1.100e-30
Identity = 76/205 (37.07%), Postives = 107/205 (52.20%), Query Frame = 0
Query:   87 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 291
            FK  I  SLE YN +I+ L+ EME YT S E ++ EI+ LK R   +  +Q CELC ++ILS  FY+FPCSHAFH+ CLL  +  HLS  +++ +  L +K+                        PLSQ                      S+  Q  +  LQA LD  +AAEC LCG +M+QS++KP ++ EE+ E A  W++
Sbjct:  776 FKDRIVESLETYNNQIDELKGEMEAYTSSAEKIREEIQGLKSRHGEIEGDQVCELCDQAILSRVFYLFPCSHAFHADCLLREMNKHLSAAEKAKIKELQEKLR-----------------------PLSQS-------------------GLSQNDQELRDKLQAELDNIIAAECPLCGSVMIQSINKPFISKEEEAE-ASLWSI 937          
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A8K1FLW4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLW4_PYTOL)

HSP 1 Score: 130 bits (328), Expect = 2.100e-30
Identity = 71/218 (32.57%), Postives = 114/218 (52.29%), Query Frame = 0
Query:   87 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTAS--GXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRA-----------LQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 291
            FK+EIC SLE YN +I+ L++EM+DYT S E ++A+++++++R   VS NQ CEL G++IL  +FYVFPCSHAFH+  L   +  HL+  Q   V  L+ K+         + L T            P S  +                +      A + + A           +Q  LD  +A+EC+ CG++M++S+  P VTP+++E +  +W +
Sbjct:  836 FKKEICESLEVYNDRIDELKEEMQDYTQSAELIRADMQKIRKRCAMVSGNQRCELTGQNILGKEFYVFPCSHAFHATALRQEMMKHLNSFQRQTVKQLVQKL---------QELSTMEVPTTTSFFQRPFSAALPFLNLSSSEKDAMQALNGGDGANAPNPKEAAKQTLAQEREMVQQKLDEIIASECIFCGEVMIKSIHSPFVTPDDEEAEGSEWKI 1044          
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A484DZP8_BRELC (Pep3_Vps18 domain-containing protein n=13 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DZP8_BRELC)

HSP 1 Score: 130 bits (327), Expect = 2.860e-30
Identity = 68/209 (32.54%), Postives = 111/209 (53.11%), Query Frame = 0
Query:   87 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQG----VSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 291
            FK+EIC SLE YN +IE L++EM+DYT S E ++ ++++L++R   VS NQ CEL G++IL  +FYVFPCSHAFH+  L   ++ HL+  Q   V  L+ K+    +    R               LS      ++               +    +     +  +Q  LD  +A+EC+ CG++M++S+  P +TPE++  +  +W +
Sbjct:  851 FKKEICESLEIYNDRIEQLKEEMQDYTQSAELIRTDMQKLRKRCAVVSGNQRCELTGQNILGKEFYVFPCSHAFHAGALRQEMQKHLNSFQRQTVKQLIQKLTELSTEMPTRTNFFHRPLSTFPFLNLSSSEKEVMTPGIDGASVAATAKAKNAAKEQSIAQEREMVQQKLDEIIASECIFCGEVMIKSIHSPFITPEDEANEGSEWTI 1059          
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A8H7BVL9_9FUNG (Pep3_Vps18 domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BVL9_9FUNG)

HSP 1 Score: 130 bits (326), Expect = 4.040e-30
Identity = 76/205 (37.07%), Postives = 116/205 (56.59%), Query Frame = 0
Query:   87 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 291
            FK EIC +LEEYN +IE L+ EM++ T S ++++ +I ELK R   V++ + C +C RS+L+ QFY+FPC H FH+ CL+N I  +L   Q   ++SL ++++   +A G  +  +A+          + GV                   T +R Q     LQ  LD  VA+EC LCGD+MV+SVD+P +T EE + +   WA+
Sbjct: 1074 FKDEICSALEEYNIRIEDLKTEMDEATKSADSIRLDIRELKSRFALVNAVEKCYVCNRSLLTRQFYIFPCQHVFHADCLINQITKYLPSRQIRLLASLQEQLSREKAARGRTSPASATATRLMS---AAAGV-----IFPADAAGNHESTFTVERLQ----TLQDELDDIVASECALCGDVMVKSVDQPFITDEEADVETS-WAI 1265          
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A1Y1Y992_9FUNG (Pep3_Vps18 domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y992_9FUNG)

HSP 1 Score: 127 bits (320), Expect = 2.390e-29
Identity = 73/205 (35.61%), Postives = 109/205 (53.17%), Query Frame = 0
Query:   87 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 291
            FK EIC +LEEYN  IE L+ EM++ T + E ++ +I+ELK R   VS N+ C LC + +L+ QFY+FPC HAFH+ CL+N ++ +L+P Q   +  L ++IA        R+L                                   +D++   +     L+  LD  VAAEC LCGD+M++S+D P +  +EQEE A  W +
Sbjct:  844 FKEEICSALEEYNIHIEDLKGEMDEATRNAENIRQDIKELKNRFAIVSLNENCSLCDQPVLTRQFYIFPCQHAFHADCLINKVKQYLNPRQIRLLQELQEEIA--------RDL--------------------TIQRRAGKNNQAAEKMDSATNLEQ----LKEELDDLVAAECYLCGDLMIKSIDLPFIQQDEQEELAS-WTV 1015          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI29_ECTSI5.120e-8660.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L255_9PHAE2.210e-6171.58Vps39_2 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CAW5_9STRA1.430e-3542.23Pep3_Vps18 domain-containing protein n=1 Tax=Tribo... [more]
A0A5D6XVF9_9STRA9.930e-3233.49Pep3_Vps18 domain-containing protein n=1 Tax=Pythi... [more]
A0A4D9CQ63_9STRA1.040e-3137.38Pep3_Vps18 domain-containing protein n=2 Tax=Monod... [more]
D8M6Q2_BLAHO1.100e-3037.07RING-type domain-containing protein n=1 Tax=Blasto... [more]
A0A8K1FLW4_PYTOL2.100e-3032.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484DZP8_BRELC2.860e-3032.54Pep3_Vps18 domain-containing protein n=13 Tax=Pero... [more]
A0A8H7BVL9_9FUNG4.040e-3037.07Pep3_Vps18 domain-containing protein n=1 Tax=Apoph... [more]
A0A1Y1Y992_9FUNG2.390e-2935.61Pep3_Vps18 domain-containing protein n=1 Tax=Basid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..129
NoneNo IPR availablePANTHERPTHR23323VACUOLAR MEMBRANE PROTEIN RELATEDcoord: 87..284
NoneNo IPR availablePANTHERPTHR23323:SF26VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 18 HOMOLOGcoord: 87..284
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 125..172
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 103..176
e-value: 3.5E-5
score: 25.3
IPR019453Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2PFAMPF10367Vps39_2coord: 116..165
e-value: 6.1E-6
score: 26.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9526contigH-paniculata_contig9526:2158..5837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9526.17253.1mRNA_H-paniculata_contig9526.17253.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9526 2158..5837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9526.17253.1 ID=prot_H-paniculata_contig9526.17253.1|Name=mRNA_H-paniculata_contig9526.17253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=292bp
DAAIHNHLLALYAQEEEWRELSSTAATDSAHSRVSQPWAVGNKSSGQLGE
SSQELSSSLRVNSASSPSALLAFIARPAEERFFDPIFKREICVSLEEYNG
KIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQ
FYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNL
GTASGAGTGVGRPLSQGVSASGRGTGPGSGSGGGDVDTSKRAQHYQRALQ
ASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR019453VPS39/TGF_beta_rcpt-assoc_2