mRNA_H-paniculata_contig9526.17253.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: D8LI29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI29_ECTSI) HSP 1 Score: 284 bits (727), Expect = 5.120e-86 Identity = 197/328 (60.06%), Postives = 214/328 (65.24%), Query Frame = 1 Query: 1 DAAIHNHLLALYAQEEEWRELSSTAATDSAHSRVSQPWAVGNKSSGQLGESSQELSSSLRVN-------------------------------------SASSPSALLAFIARPAEERFFDPIFKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 873 DAAIHNHLLALYAQEEEWRE +H S G K+ + ++ Q LS + V+ +AS SALLAFIARP EERFFDPIFKREICVSLEEYNGKIE LRKEMEDYTLS+EAVQ EI EL+QRSIYVSSNQTCELC R+ILSTQFYVFPC HAFH +CLL +IRPHLS EQ SAV SL+ IA XXXXXXX XXXXXXXXXXXXXXX D S+RAQHY R+LQ LDGYVA ECVLCGD+MVQSVDKPLV EEQ EQ QWAL Sbjct: 572 DAAIHNHLLALYAQEEEWRE---------SHRHPSSLSTRGYKALSGVDDAYQALSGAGSVSGSGLTKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASGSSALLAFIARPPEERFFDPIFKREICVSLEEYNGKIESLRKEMEDYTLSSEAVQTEIVELQQRSIYVSSNQTCELCKRNILSTQFYVFPCGHAFHFECLLENIRPHLSVEQRSAVESLVAMIAX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADGSRRAQHYLRSLQTELDGYVAGECVLCGDMMVQSVDKPLVAVEEQAEQMHQWAL 878
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A6H5L255_9PHAE (Vps39_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L255_9PHAE) HSP 1 Score: 201 bits (511), Expect = 2.210e-61 Identity = 131/183 (71.58%), Postives = 141/183 (77.05%), Query Frame = 1 Query: 325 MEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 873 MEDYTLS+EAVQAEI EL+QRSIYVSSNQTCELC R+ILSTQFYVFPC HAFHS+CLL +IRPHLS EQ SAV SL+ IAA XXXXXXX XXXXXXXXXXXXX D S+RAQHY+R+LQ LDGYVAAECVLCGD+MVQSVDKPLVT EEQ EQ QWAL Sbjct: 1 MEDYTLSSEAVQAEIVELQQRSIYVSSNQTCELCKRNILSTQFYVFPCGHAFHSECLLENIRPHLSVEQRSAVESLVKMIAAXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGTDGSRRAQHYRRSLQTELDGYVAAECVLCGDMMVQSVDKPLVTVEEQAEQLHQWAL 173
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A836CAW5_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW5_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.430e-35 Identity = 87/206 (42.23%), Postives = 111/206 (53.88%), Query Frame = 1 Query: 259 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNH-IRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 873 FK +IC SLE YN +I LR EM +YT + EA QAE L+ R +YV S Q CELCG L+ Y+FPC+HAFH CL +H +R +L+P+Q SAV +L+ +IAA + + A+G KRA AL++ LDGYVAAEC LCG+ M+ SVDKPLV E A WAL Sbjct: 974 FKADICASLEAYNARIGRLRAEMAEYTAAAEATQAEAAALRARELYVGSAQPCELCGAPALARALYLFPCAHAFHCDCLRDHALREYLTPQQRSAVGTLIQRIAAAEPS-------AATGAAA---------------------------AALPKRAALQLAALRSELDGYVAAECALCGEAMIDSVDKPLVEDGRAAEAAA-WAL 1144
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A5D6XVF9_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVF9_9STRA) HSP 1 Score: 134 bits (338), Expect = 9.930e-32 Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 1 Query: 259 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGV------SXXXXXXXXXXXXXXXDVDTSKRAQHYQRAL-QASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 873 FK+EIC SLE YN +IE L++EM+DYT S E +++++++L++R VS NQ CEL G++IL +FY+FPCSHAFH+ L ++ HL+ Q V L+ K+ L PLS S D +K++ +R + Q LD +A+EC+ CG++M++S+ P +TP+++ + +W + Sbjct: 853 FKKEICESLEVYNDRIEQLKEEMQDYTQSAELIRSDMQKLRKRCAIVSGNQRCELTGQNILGKEFYLFPCSHAFHATALRQEMQKHLNSFQRQTVKQLIQKL---------NELSVEMPATNKFFQPLSAFAFLNLTSSEKEAMHPDGATSAQSAADAAKQSLAQEREMVQQKLDEIIASECIFCGEVMIKSIHTPFITPDDELSEGAEWKI 1055
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A4D9CQ63_9STRA (Pep3_Vps18 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ63_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.040e-31 Identity = 77/206 (37.38%), Postives = 118/206 (57.28%), Query Frame = 1 Query: 259 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTP-EEQEEQAGQWAL 873 FK +IC SL +Y+ I+GL++EME+ ST +++ + L+ R + ++++Q C+LC S+ + QFYVFPC HAFH+ CL +HI P+L+ Q AV +L +++AA + G +G G +SQ K AQ ALQ +DGY+AAEC CGD+M++S+DKPLV EE + +A +W + Sbjct: 1126 FKEKICDSLSQYSSTIQGLKQEMEELAQSTVEMESAVAALRGRHLSIANSQRCDLCRTSVFAHQFYVFPCQHAFHATCLAHHILPYLNTSQRRAVQALQEQLAA-EYFGFNEGIG---GGVRGTGGKMSQ----------------------RKAAQ--VEALQGEIDGYLAAECPFCGDVMIRSIDKPLVGEGEEAKAEAEEWEI 1303
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: D8M6Q2_BLAHO (RING-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M6Q2_BLAHO) HSP 1 Score: 131 bits (330), Expect = 1.100e-30 Identity = 76/205 (37.07%), Postives = 107/205 (52.20%), Query Frame = 1 Query: 259 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 873 FK I SLE YN +I+ L+ EME YT S E ++ EI+ LK R + +Q CELC ++ILS FY+FPCSHAFH+ CLL + HLS +++ + L +K+ PLSQ S+ Q + LQA LD +AAEC LCG +M+QS++KP ++ EE+ E A W++ Sbjct: 776 FKDRIVESLETYNNQIDELKGEMEAYTSSAEKIREEIQGLKSRHGEIEGDQVCELCDQAILSRVFYLFPCSHAFHADCLLREMNKHLSAAEKAKIKELQEKLR-----------------------PLSQS-------------------GLSQNDQELRDKLQAELDNIIAAECPLCGSVMIQSINKPFISKEEEAE-ASLWSI 937
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A8K1FLW4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLW4_PYTOL) HSP 1 Score: 130 bits (328), Expect = 2.100e-30 Identity = 71/218 (32.57%), Postives = 114/218 (52.29%), Query Frame = 1 Query: 259 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTAS--GXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRA-----------LQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 873 FK+EIC SLE YN +I+ L++EM+DYT S E ++A+++++++R VS NQ CEL G++IL +FYVFPCSHAFH+ L + HL+ Q V L+ K+ + L T P S + + A + + A +Q LD +A+EC+ CG++M++S+ P VTP+++E + +W + Sbjct: 836 FKKEICESLEVYNDRIDELKEEMQDYTQSAELIRADMQKIRKRCAMVSGNQRCELTGQNILGKEFYVFPCSHAFHATALRQEMMKHLNSFQRQTVKQLVQKL---------QELSTMEVPTTTSFFQRPFSAALPFLNLSSSEKDAMQALNGGDGANAPNPKEAAKQTLAQEREMVQQKLDEIIASECIFCGEVMIKSIHSPFVTPDDEEAEGSEWKI 1044
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A484DZP8_BRELC (Pep3_Vps18 domain-containing protein n=13 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DZP8_BRELC) HSP 1 Score: 130 bits (327), Expect = 2.860e-30 Identity = 68/209 (32.54%), Postives = 111/209 (53.11%), Query Frame = 1 Query: 259 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQG----VSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 873 FK+EIC SLE YN +IE L++EM+DYT S E ++ ++++L++R VS NQ CEL G++IL +FYVFPCSHAFH+ L ++ HL+ Q V L+ K+ + R LS ++ + + + +Q LD +A+EC+ CG++M++S+ P +TPE++ + +W + Sbjct: 851 FKKEICESLEIYNDRIEQLKEEMQDYTQSAELIRTDMQKLRKRCAVVSGNQRCELTGQNILGKEFYVFPCSHAFHAGALRQEMQKHLNSFQRQTVKQLIQKLTELSTEMPTRTNFFHRPLSTFPFLNLSSSEKEVMTPGIDGASVAATAKAKNAAKEQSIAQEREMVQQKLDEIIASECIFCGEVMIKSIHSPFITPEDEANEGSEWTI 1059
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A8H7BVL9_9FUNG (Pep3_Vps18 domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BVL9_9FUNG) HSP 1 Score: 130 bits (326), Expect = 4.040e-30 Identity = 76/205 (37.07%), Postives = 116/205 (56.59%), Query Frame = 1 Query: 259 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 873 FK EIC +LEEYN +IE L+ EM++ T S ++++ +I ELK R V++ + C +C RS+L+ QFY+FPC H FH+ CL+N I +L Q ++SL ++++ +A G + +A+ + GV T +R Q LQ LD VA+EC LCGD+MV+SVD+P +T EE + + WA+ Sbjct: 1074 FKDEICSALEEYNIRIEDLKTEMDEATKSADSIRLDIRELKSRFALVNAVEKCYVCNRSLLTRQFYIFPCQHVFHADCLINQITKYLPSRQIRLLASLQEQLSREKAARGRTSPASATATRLMS---AAAGV-----IFPADAAGNHESTFTVERLQ----TLQDELDDIVASECALCGDVMVKSVDQPFITDEEADVETS-WAI 1265
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Match: A0A1Y1Y992_9FUNG (Pep3_Vps18 domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y992_9FUNG) HSP 1 Score: 127 bits (320), Expect = 2.390e-29 Identity = 73/205 (35.61%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 259 FKREICVSLEEYNGKIEGLRKEMEDYTLSTEAVQAEIEELKQRSIYVSSNQTCELCGRSILSTQFYVFPCSHAFHSQCLLNHIRPHLSPEQESAVSSLLDKIAAGDSAGGGRNLGTASGXXXXXXXPLSQGVSXXXXXXXXXXXXXXXDVDTSKRAQHYQRALQASLDGYVAAECVLCGDIMVQSVDKPLVTPEEQEEQAGQWAL 873 FK EIC +LEEYN IE L+ EM++ T + E ++ +I+ELK R VS N+ C LC + +L+ QFY+FPC HAFH+ CL+N ++ +L+P Q + L ++IA R+L +D++ + L+ LD VAAEC LCGD+M++S+D P + +EQEE A W + Sbjct: 844 FKEEICSALEEYNIHIEDLKGEMDEATRNAENIRQDIKELKNRFAIVSLNENCSLCDQPVLTRQFYIFPCQHAFHADCLINKVKQYLNPRQIRLLQELQEEIA--------RDL--------------------TIQRRAGKNNQAAEKMDSATNLEQ----LKEELDDLVAAECYLCGDLMIKSIDLPFIQQDEQEELAS-WTV 1015 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9526.17253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9526.17253.1 >prot_H-paniculata_contig9526.17253.1 ID=prot_H-paniculata_contig9526.17253.1|Name=mRNA_H-paniculata_contig9526.17253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=292bp DAAIHNHLLALYAQEEEWRELSSTAATDSAHSRVSQPWAVGNKSSGQLGEback to top mRNA from alignment at H-paniculata_contig9526:2158..5837+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9526.17253.1 ID=mRNA_H-paniculata_contig9526.17253.1|Name=mRNA_H-paniculata_contig9526.17253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3680bp|location=Sequence derived from alignment at H-paniculata_contig9526:2158..5837+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9526:2158..5837+ >mRNA_H-paniculata_contig9526.17253.1 ID=mRNA_H-paniculata_contig9526.17253.1|Name=mRNA_H-paniculata_contig9526.17253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1752bp|location=Sequence derived from alignment at H-paniculata_contig9526:2158..5837+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |