mRNA_H-paniculata_contig9526.17252.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_H-paniculata_contig9526.17252.1 vs. uniprot
Match: A0A6H5KQH0_9PHAE (Pep3_Vps18 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH0_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 4.830e-34
Identity = 74/99 (74.75%), Postives = 79/99 (79.80%), Query Frame = 1

Query:    1 QAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRRAAM--LLSSEAGVTKAESTAVAQAA-----GEDLAIKYLEFCVNEL 276
            +APFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRR+AAM  L +S         TA   A+     GEDLAIKYLEFCVN+L
Sbjct:  857 KAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRKAAMVRLSASPPAAVSVSPTAEGNASLAVGEGEDLAIKYLEFCVNDL 955

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BLAST of mRNA_H-paniculata_contig9526.17252.1 vs. uniprot
Match: D8LI29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI29_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 5.720e-33
Identity = 73/102 (71.57%), Postives = 78/102 (76.47%), Query Frame = 1

Query:    1 QAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRRAAM--LLSSEAGVTKAESTAVAQA--------AGEDLAIKYLEFCVNEL 276
            +APFDKVEPLVYKYSASLMAADPAGTI TWMSKPQLKPTKLIPALVRYSQRR+AAM  L +S         TA A+          GEDLAIKYLEFCVN+L
Sbjct:  467 KAPFDKVEPLVYKYSASLMAADPAGTIGTWMSKPQLKPTKLIPALVRYSQRRKAAMERLSASPPAAVSVSPTAAAEGNASLAAAGEGEDLAIKYLEFCVNDL 568

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BLAST of mRNA_H-paniculata_contig9526.17252.1 vs. uniprot
Match: A0A836CAW5_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.380e-16
Identity = 49/92 (53.26%), Postives = 58/92 (63.04%), Query Frame = 1

Query:    1 QAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRRAAMLLSSEAGVTKAESTAVAQAAGEDLAIKYLEFCVNEL 276
            +AP +KVE LVY+YSA LM AD AGT+  WM KP L+ TKL+PALVRYS+ R AA           AE  A     G D A+ YLE+CVN L
Sbjct:  713 RAPLEKVEGLVYRYSAVLMDADAAGTVSMWMGKPGLRATKLMPALVRYSRHRAAA-----------AEPRA-----GPDWAVTYLEYCVNTL 788

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BLAST of mRNA_H-paniculata_contig9526.17252.1 vs. uniprot
Match: A0A7S2BML3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BML3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 6.660e-9
Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 1

Query:    4 APFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRRAAM 168
            APF++V  L YK+S++ M   P  T+  W +KP L PTKLIPA VRY+  R  AM
Sbjct:   98 APFEQVSGLFYKFSSAFMETVPERTVHVWKTKPDLSPTKLIPAFVRYNHLRATAM 152

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BLAST of mRNA_H-paniculata_contig9526.17252.1 vs. uniprot
Match: A0A4D8ZSD8_SALSN (Pep3_Vps18 domain-containing protein n=6 Tax=Salvia TaxID=21880 RepID=A0A4D8ZSD8_SALSN)

HSP 1 Score: 52.0 bits (123), Expect = 1.180e-5
Identity = 31/83 (37.35%), Postives = 42/83 (50.60%), Query Frame = 1

Query:   28 LVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRRAAMLLSSEAGVTKAESTAVAQAAGEDLAIKYLEFCVNEL 276
            L YK++  L+  D   T+E+WM+K  L P KLIPA++RYS    A   L+     T                IKYLE+CV+ L
Sbjct:  562 LQYKFAPDLIMLDAYETVESWMTKKDLNPRKLIPAMMRYSSEPHAKNSLTGNWNETHE-------------VIKYLEYCVHRL 631

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig9526.17252.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig9526.17252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5KQH0_9PHAE	4.830e-34	74.75	Pep3_Vps18 domain-containing protein n=1 Tax=Ectoc...	[more]
D8LI29_ECTSI	5.720e-33	71.57	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CAW5_9STRA	2.380e-16	53.26	Pep3_Vps18 domain-containing protein n=1 Tax=Tribo...	[more]
A0A7S2BML3_9STRA	6.660e-9	50.91	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A4D8ZSD8_SALSN	1.180e-5	37.35	Pep3_Vps18 domain-containing protein n=6 Tax=Salvi...	[more]