Homology
BLAST of mRNA_H-paniculata_contig95.17238.1 vs. uniprot
Match:
D7FH06_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH06_ECTSI)
HSP 1 Score: 74.3 bits (181), Expect = 1.980e-10
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0
Query: 3 LQDLPASALYPLVHGFLSECGLSKTSTTFRKEVDMTAKKLSKQQTALGIE-HDLLEIVNIYRKTM 66
++DLPASAL+PLVH FL ECGLS T+ R+E ++KKL KQQ ALG DLLEIVN +RK +
Sbjct: 10 VEDLPASALHPLVHSFLLECGLSATAAALREETGKSSKKLGKQQAALGGGCKDLLEIVNAHRKRL 74
BLAST of mRNA_H-paniculata_contig95.17238.1 vs. uniprot
Match:
A0A6H5JYW0_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW0_9PHAE)
HSP 1 Score: 74.7 bits (182), Expect = 2.260e-10
Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 3 LQDLPASALYPLVHGFLSECGLSKTSTTFRKEVDMTAKKLSKQQTALGIE-HDLLEIVNIYRKTM 66
+ DLPASAL+PLVH FL ECGLS T+ R+E +AKKL KQQ ALG DLLEIVN +RK +
Sbjct: 10 VDDLPASALHPLVHSFLLECGLSATAAALREETGKSAKKLGKQQAALGGGCKDLLEIVNAHRKRL 74
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig95.17238.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
50 100 150 200 250 300 350 400 450 500 550 600 Expect = 1.98e-10 / Id = 60.00 Expect = 2.26e-10 / Id = 61.54 Sequence D7FH06_ECTSI A0A6H5JYW0_9PHAE
Match Name E-value Identity Description
D7FH06_ECTSI 1.980e-10 60.00 LisH domain-containing protein n=1 Tax=Ectocarpus ... [more] A0A6H5JYW0_9PHAE 2.260e-10 61.54 LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
50 100 150 200 250 300 350 400 450 500 550 600 Score = Score = 8.325 Sequence Coil PS50896
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 325..352 IPR006594 LIS1 homology motif PROSITE PS50896 LISH coord: 7..39
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_H-paniculata_contig95.17238.1 ID=prot_H-paniculata_contig95.17238.1|Name=mRNA_H-paniculata_contig95.17238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=637bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR006594 LisH