prot_H-paniculata_contig95.17238.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig95.17238.1
Unique Nameprot_H-paniculata_contig95.17238.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length637
Homology
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BLAST of mRNA_H-paniculata_contig95.17238.1 vs. uniprot
Match: D7FH06_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH06_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.980e-10
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0 
Query:    3 LQDLPASALYPLVHGFLSECGLSKTSTTFRKEVDMTAKKLSKQQTALGIE-HDLLEIVNIYRKTM 66
            ++DLPASAL+PLVH FL ECGLS T+   R+E   ++KKL KQQ ALG    DLLEIVN +RK +
Sbjct:   10 VEDLPASALHPLVHSFLLECGLSATAAALREETGKSSKKLGKQQAALGGGCKDLLEIVNAHRKRL 74
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BLAST of mRNA_H-paniculata_contig95.17238.1 vs. uniprot
Match: A0A6H5JYW0_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW0_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.260e-10
Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 0 
Query:    3 LQDLPASALYPLVHGFLSECGLSKTSTTFRKEVDMTAKKLSKQQTALGIE-HDLLEIVNIYRKTM 66
            + DLPASAL+PLVH FL ECGLS T+   R+E   +AKKL KQQ ALG    DLLEIVN +RK +
Sbjct:   10 VDDLPASALHPLVHSFLLECGLSATAAALREETGKSAKKLGKQQAALGGGCKDLLEIVNAHRKRL 74
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig95.17238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH06_ECTSI1.980e-1060.00LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JYW0_9PHAE2.260e-1061.54LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 325..352
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 7..39
score: 8.325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig95contigH-paniculata_contig95:49093..53501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig95.17238.1mRNA_H-paniculata_contig95.17238.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig95 48860..53986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig95.17238.1 ID=prot_H-paniculata_contig95.17238.1|Name=mRNA_H-paniculata_contig95.17238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=637bp
MTLQDLPASALYPLVHGFLSECGLSKTSTTFRKEVDMTAKKLSKQQTALG
IEHDLLEIVNIYRKTMVKVEEAESSSSDEEEENDETDDGSNEEEEKEEIR
NMNDNVKKTAVAEIPAAAERAEDSDEESSSDEEEGVEAEKVQIQSNGDSR
KEKKAEKHSVETKTETESDSSSSEDESSADEEEGKKQSKSKGTIVVAKNG
ARGKKKAEVESSSSSSDEEGSDDEKEEEEVKEKKTKEGKKDEKKTKEEVK
EKKMKEGKKDEKKTKEEVKEKKMKEGKKDEKKTKEEVKEKKTKEGKKDEK
KTKEEVKEKKTKEGKKDEKKTKEGKKDEKKAKEEVKEEKKMKEGKKKEKV
KEGKKAKADATVIAAITNGGKKAAKKSAEKEAKVEPSSSSNSSDDDDDDD
DDNDESSDSEEEEEQVKETPSNKAKGGNAAVVAKKKNVPAPAPAPTPPTV
EKMGTESSSSDEEEGGDSGEDDSEHDSSSDEEEGEDSGEDDSEHDSSSDE
EEEEEEEVKPPTPASAKQRPQKRKAVAAAEAEDSEDDAEEGSDDETPAVA
PPAKKRKKVDAEPAKAIAAPKAVEEDSDDDSSSSDSDSDEDFDDSDDSEN
SDSSSEDEEDVSQHLVIPTVRGRSASHPRSRLSSGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH