prot_H-paniculata_contig947.17217.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig947.17217.1
Unique Nameprot_H-paniculata_contig947.17217.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length362
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig947.17217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 19..51
e-value: 6.1E-4
score: 29.1
coord: 239..271
e-value: 0.049
score: 22.8
coord: 167..198
e-value: 0.0049
score: 26.1
coord: 203..234
e-value: 110.0
score: 11.3
coord: 56..88
e-value: 48.0
score: 12.8
coord: 276..307
e-value: 15.0
score: 14.5
coord: 130..162
e-value: 5.7E-6
score: 35.8
coord: 93..125
e-value: 8.2E-4
score: 28.7
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 158..307
e-value: 7.8E-19
score: 67.7
coord: 10..159
e-value: 3.6E-21
score: 75.4
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 102..311
e-value: 4.7E-37
score: 129.6
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 3..81
coord: 182..231
coord: 235..310
coord: 117..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig947contigH-paniculata_contig947:4910..7468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig947.17217.1mRNA_H-paniculata_contig947.17217.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig947 4634..7477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig947.17217.1 ID=prot_H-paniculata_contig947.17217.1|Name=mRNA_H-paniculata_contig947.17217.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=362bp
MWKFAYFEGEVGVSRLQLVKLVERQPQILALDLHHRIRPNVAYLKNELNI
PSERLPGILVAVPGLLWFNIEDTLKPKVRWFTIELMLRRNQLRKIILQHP
QVLTLSLEKNVGPKASWLKIVFGIDDLALRDMIVRHPALLLYSIETVIKP
KMSFLRDEVGLEEIRLRKLLVTTPVLFSYNVETMRSKVSYLQEELQFDCE
DVARVISRTPQLLGYRVASMKAKVAFIMQVLHTNSEETSKIISGSPTVLN
LSIEKNLRLKIDLYVNELGGKPEDVRAAIVGTPSALGYSLTKRTRPRMQV
IRLLGIEPTFEDHFWHLTSYTSVRFNRWLETQVMENLGAERRGDAEVKSR
MKRYLSILHGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf