prot_H-paniculata_contig947.17217.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig947.17217.1
Unique Name	prot_H-paniculata_contig947.17217.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	362

Homology

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig947.17217.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig947.17217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 19..51 e-value: 6.1E-4 score: 29.1 coord: 239..271 e-value: 0.049 score: 22.8 coord: 167..198 e-value: 0.0049 score: 26.1 coord: 203..234 e-value: 110.0 score: 11.3 coord: 56..88 e-value: 48.0 score: 12.8 coord: 276..307 e-value: 15.0 score: 14.5 coord: 130..162 e-value: 5.7E-6 score: 35.8 coord: 93..125 e-value: 8.2E-4 score: 28.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 158..307 e-value: 7.8E-19 score: 67.7 coord: 10..159 e-value: 3.6E-21 score: 75.4
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10		coord: 102..311 e-value: 4.7E-37 score: 129.6
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 3..81 coord: 182..231 coord: 235..310 coord: 117..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig947	contig	H-paniculata_contig947:4910..7468 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig947.17217.1	mRNA_H-paniculata_contig947.17217.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig947 4634..7477 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig947.17217.1 ID=prot_H-paniculata_contig947.17217.1|Name=mRNA_H-paniculata_contig947.17217.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=362bp
MWKFAYFEGEVGVSRLQLVKLVERQPQILALDLHHRIRPNVAYLKNELNI
PSERLPGILVAVPGLLWFNIEDTLKPKVRWFTIELMLRRNQLRKIILQHP
QVLTLSLEKNVGPKASWLKIVFGIDDLALRDMIVRHPALLLYSIETVIKP
KMSFLRDEVGLEEIRLRKLLVTTPVLFSYNVETMRSKVSYLQEELQFDCE
DVARVISRTPQLLGYRVASMKAKVAFIMQVLHTNSEETSKIISGSPTVLN
LSIEKNLRLKIDLYVNELGGKPEDVRAAIVGTPSALGYSLTKRTRPRMQV
IRLLGIEPTFEDHFWHLTSYTSVRFNRWLETQVMENLGAERRGDAEVKSR
MKRYLSILHGN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF
IPR038538	MTERF_sf