Homology
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
D8LIE6_ECTSI (Conserved protein of fucose operon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIE6_ECTSI)
HSP 1 Score: 218 bits (555), Expect = 3.460e-70
Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 1
Query: 1 MGLSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGVLGVGLDDAG 492
MGL GISP+ISP+LLV LARMGHGD ICFADA+FPSE++ P+ VRADGHE+ PLL+AV+KL PLDTYTEFPVQMMAAV GDELD +IE RF+ AVE+ QP MF+VERVERF FYERARS + VV+TGETAKYGN+IL KGVLGV + AG
Sbjct: 1 MGLIGISPLISPDLLVTLARMGHGDSICFADANFPSENL--------TSPGKPGPITVRADGHEVAPLLRAVSKLFPLDTYTEFPVQMMAAVPGDELDASIEERFSTAVEAEQPGMFKVERVERFAFYERARSCYAVVSTGETAKYGNIILVKGVLGVSDESAG 156
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
UPI001B8F97EE (L-fucose mutarotase n=2 Tax=Carboxylicivirga TaxID=1628153 RepID=UPI001B8F97EE)
HSP 1 Score: 161 bits (408), Expect = 4.090e-48
Identity = 83/153 (54.25%), Postives = 101/153 (66.01%), Query Frame = 1
Query: 7 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 465
L GISP+ISPELL LARMGHGD+I FADAHFP ES+ ++RADG I LL A+ L LD Y P+ MMA V GD+LDP++E + EA+ P +ER+ERF+FYERAR+AF VV TGETAKYGN++L KGV
Sbjct: 2 LKGISPLISPELLAVLARMGHGDEIVFADAHFPGESLNAN--------------VIRADGLHIADLLAAILPLFELDAYVSAPIVMMAPVEGDDLDPSVETAYLEAIHQTNPHAPAIERIERFDFYERARNAFAVVMTGETAKYGNILLKKGV 140
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
UPI0004789706 (L-fucose mutarotase n=1 Tax=Alkaliflexus imshenetskii TaxID=286730 RepID=UPI0004789706)
HSP 1 Score: 159 bits (402), Expect = 3.440e-47
Identity = 88/157 (56.05%), Postives = 106/157 (67.52%), Query Frame = 1
Query: 7 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGVLGVG 477
L GISPIISP+LL LARMGHGD+I FADAHFP ES ++RADG I LL+AV L LD+Y P+ MMAAV GD LDPA+E ++ +AV+ + P++ V+R+ERF FYER RSAF VV TGETAKYGN+IL KGV G
Sbjct: 2 LKGISPIISPDLLQILARMGHGDEIVFADAHFPGESFNS--------------RILRADGIRIPDLLEAVLPLFELDSYVPNPLIMMAAVEGDVLDPAVEQQYLKAVQISNPNISSVKRIERFAFYERTRSAFAVVMTGETAKYGNIILKKGVTPTG 144
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
A0A4U2LAJ6_9BACT (D-ribose pyranase n=1 Tax=Puteibacter caeruleilacunae TaxID=2528631 RepID=A0A4U2LAJ6_9BACT)
HSP 1 Score: 158 bits (399), Expect = 9.810e-47
Identity = 84/153 (54.90%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 7 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 465
L GISP+ISP+LL LARMGHGD+I ADAHFP+ES ++RADG +I LL+A+ L LD+Y E P+ MM AV GDELDP +E ++ +AVE P + VER+ERF FY+RA+SAF VV TGET KYGN+IL KGV
Sbjct: 2 LKGISPLISPKLLETLARMGHGDEIILADAHFPAESFNDN--------------VLRADGIKIPDLLQAILPLFELDSYVENPLIMMQAVEGDELDPEVEKQYMKAVEQTNPQLTTVERIERFSFYDRAKSAFAVVMTGETVKYGNIILKKGV 140
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
A0A0K8R165_9BACT (D-ribose pyranase n=1 Tax=Bacteroidales bacterium 6E TaxID=1688776 RepID=A0A0K8R165_9BACT)
HSP 1 Score: 157 bits (398), Expect = 1.310e-46
Identity = 85/154 (55.19%), Postives = 103/154 (66.88%), Query Frame = 1
Query: 7 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGVL 468
L GISPIISP LL LARMGHGD+I ADAHFP E+ ++RADG +I LL+A+ +L LD+Y PV MM AV GD+LDP +E + ++++ P + VERVERFEFYER RSAF VV TGETAKYGNVIL KGV+
Sbjct: 2 LKGISPIISPALLEILARMGHGDEIVLADAHFPGETFN--------------TRVIRADGLKIPALLEAILQLFELDSYVPHPVAMMDAVPGDQLDPTVEQSYLKSIQLTHPKIQSVERVERFEFYERTRSAFAVVMTGETAKYGNVILKKGVI 141
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
A0A7K3XDQ0_9BACT (D-ribose pyranase n=1 Tax=Mariniphaga sp. TaxID=1954475 RepID=A0A7K3XDQ0_9BACT)
HSP 1 Score: 157 bits (397), Expect = 1.910e-46
Identity = 83/153 (54.25%), Postives = 101/153 (66.01%), Query Frame = 1
Query: 7 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 465
L GISP+ISPELL LARMGHGD+I ADAHFP E+ P ++RADG +I LL A+ L LD Y P+ MMAAV GD LDP +E + +++ PS+ +E+VERF FYERA+SAF VV TGETAKYGN+IL KGV
Sbjct: 2 LKGISPLISPELLSVLARMGHGDEIVLADAHFPGETFN--------------PRVLRADGLKIADLLSAILPLFELDAYAAHPIAMMAAVPGDALDPLVEASYLKSILETNPSVAPIEQVERFAFYERAKSAFAVVMTGETAKYGNIILKKGV 140
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
A0A350YV71_9BACT (D-ribose pyranase n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=A0A350YV71_9BACT)
HSP 1 Score: 156 bits (395), Expect = 3.730e-46
Identity = 83/154 (53.90%), Postives = 103/154 (66.88%), Query Frame = 1
Query: 7 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGVL 468
L GISPIISP LL LARMGHGD+I ADAHFP E+ ++RADG +I+ LL+A+ L LD+Y PV MM AV GD+LDPA+E + ++++ PS+ VERVERF FY+R RSAF VV TGET KYGN+IL KGV+
Sbjct: 2 LKGISPIISPALLEVLARMGHGDEIVLADAHFPGETFNS--------------RVIRADGLKISSLLEAILPLFELDSYVPHPVAMMDAVPGDQLDPAVEETYLKSIQITHPSIHSVERVERFAFYDRTRSAFAVVMTGETTKYGNIILKKGVI 141
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
A0A432IQD0_9BACT (D-ribose pyranase n=1 Tax=Flavobacteriia bacterium TaxID=2044941 RepID=A0A432IQD0_9BACT)
HSP 1 Score: 156 bits (394), Expect = 5.290e-46
Identity = 80/153 (52.29%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 7 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 465
L GISP+ISP+LL LARMGHGD+I ADAHFP E+ ++RADG +I LL+A+ L LD+YT+ P+ MMAAV GD+LDPA+E + E + P + ++R++RFEFY+RA+ AF VV TGETAKYGN+IL KGV
Sbjct: 2 LKGISPVISPDLLSTLARMGHGDEIILADAHFPGETFNAN--------------VLRADGIKIPQLLEAILPLFELDSYTDSPLIMMAAVTGDQLDPAVEASYMEKIHLTNPEVPAIKRIDRFEFYKRAKDAFAVVMTGETAKYGNIILKKGV 140
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
A0A6C1RYY7_9BACT (D-ribose pyranase n=1 Tax=Marinilabiliales bacterium TaxID=2053303 RepID=A0A6C1RYY7_9BACT)
HSP 1 Score: 155 bits (393), Expect = 7.510e-46
Identity = 83/153 (54.25%), Postives = 100/153 (65.36%), Query Frame = 1
Query: 7 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 465
L GISPIISP+LL LARMGHGD+I ADAHFP ES+ L+VRADG I L++A+ L LD Y + P+ MM AV GD LDP +E + + V P + ER++RF FYERA+SAF VV TGETAKYGN+ILTKGV
Sbjct: 2 LKGISPIISPQLLEVLARMGHGDEIVLADAHFPGESLNS--------------LVVRADGLRIADLIEAILPLFELDAYVDTPLVMMDAVEGDHLDPGVEASYMDRVRLTNPGVSPPERIDRFAFYERAKSAFAVVMTGETAKYGNIILTKGV 140
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match:
W7Y912_9BACT (D-ribose pyranase n=5 Tax=Marinilabiliaceae TaxID=558415 RepID=W7Y912_9BACT)
HSP 1 Score: 155 bits (392), Expect = 1.100e-45
Identity = 81/153 (52.94%), Postives = 103/153 (67.32%), Query Frame = 1
Query: 7 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 465
L GISP+ISPELL LARMGHGD+I ADAHFP ES G ++RADG I LL+A+ L LD+Y P+ MMAAV GDELDP +E + +A+ + P++ +ER+ RFEFY++AR AF V+ TGETAKYGN++L KGV
Sbjct: 2 LKGISPLISPELLEVLARMGHGDEIILADAHFPGESFNG--------------RVLRADGLRIPDLLEAILPLFELDSYVPAPLTMMAAVEGDELDPTVEEAYLKAIHKSNPNVPPIERIGRFEFYDKARGAFAVLMTGETAKYGNILLKKGV 140
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.46e-70 / Id = 68.90 Expect = 4.09e-48 / Id = 54.25 Expect = 3.44e-47 / Id = 56.05 Expect = 9.81e-47 / Id = 54.90 Expect = 1.31e-46 / Id = 55.19 Expect = 1.91e-46 / Id = 54.25 Expect = 3.73e-46 / Id = 53.90 Expect = 5.29e-46 / Id = 52.29 Expect = 7.51e-46 / Id = 54.25 Expect = 1.10e-45 / Id = 52.94 Sequence D8LIE6_ECTSI UPI001B8F97EE UPI0004789706 A0A4U2LAJ6_9BACT A0A0K8R165_9BACT A0A7K3XDQ0_9BACT A0A350YV71_9BACT A0A432IQD0_9BACT A0A6C1RYY7_9BACT W7Y912_9BACT Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 218.4 Seed ortholog evalue 2.5e-54 Seed eggNOG ortholog 2880.D8LIE6 Preferred name FUOM KEGG rclass RC00563 KEGG ko ko:K02431 KEGG Reaction R10764 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006004,GO:0007275,GO:0007399,GO:0007610,GO:0007617,GO:0007618,GO:0008150,GO:0008152,GO:0009987,GO:0010721,GO:0016853,GO:0016854,GO:0016857,GO:0019098,GO:0019318,GO:0019953,GO:0022008,GO:0022414,GO:0030154,GO:0030246,GO:0032501,GO:0032502,GO:0032504,GO:0036065,GO:0036094,GO:0042806,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0048029,GO:0048519,GO:0048523,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051239,GO:0051241,GO:0051704,GO:0051960,GO:0051961,GO:0060180,GO:0060284,GO:0065007,GO:0070085,GO:0071704,GO:2000026 EggNOG free text desc. Fucose mutarotase EggNOG OGs 2RZR7@2759,COG4154@1 Ec32 ortholog description D-ribose pyranase RbsD/L-fucose mutarotase FucU Ec32 ortholog Ec-18_003960.1 EC 5.1.3.29 COG Functional cat. G Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko01000 Exons 1 Model size 492 Cds size 492 Stop 0 Start 1
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9433.17188.1
>prot_H-paniculata_contig9433.17188.1 ID=prot_H-paniculata_contig9433.17188.1|Name=mRNA_H-paniculata_contig9433.17188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MGLSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGGSSNKNNS back to top mRNA from alignment at H-paniculata_contig9433:4981..5472-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9433.17188.1 ID=mRNA_H-paniculata_contig9433.17188.1|Name=mRNA_H-paniculata_contig9433.17188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=492bp|location=Sequence derived from alignment at H-paniculata_contig9433:4981..5472- (Halopteris paniculata Hal_grac_a_UBK monoicous)ATGGGCTTGAGCGGCATCTCCCCCATCATCTCGCCAGAATTGTTGGTCGC
CCTTGCACGCATGGGCCACGGCGATAAAATATGCTTCGCGGACGCTCATT
TCCCCTCTGAGAGCATTGGAGGCGGGGGCAGTAGCAACAAAAACAACAGC
AACAGCAACCTGCCCCTCCTCGTACGAGCTGACGGTCATGAGATCACACC
GTTGCTCAAAGCCGTGGCGAAACTGATCCCTCTCGACACATACACGGAGT
TCCCCGTGCAAATGATGGCGGCGGTGGTCGGGGACGAGCTCGACCCAGCG
ATCGAAGTACGGTTTGCGGAGGCAGTGGAATCGGCGCAGCCGAGCATGTT
TAGGGTGGAACGGGTGGAGAGGTTCGAATTTTACGAGCGCGCTCGGTCAG
CGTTCGTCGTGGTTGCTACTGGGGAGACTGCCAAGTACGGAAACGTGATT
TTGACCAAGGGGGTTCTAGGGGTCGGACTGGACGACGCCGGC back to top Coding sequence (CDS) from alignment at H-paniculata_contig9433:4981..5472-
>mRNA_H-paniculata_contig9433.17188.1 ID=mRNA_H-paniculata_contig9433.17188.1|Name=mRNA_H-paniculata_contig9433.17188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig9433:4981..5472- (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top