prot_H-paniculata_contig9353.17128.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9353.17128.1
Unique Nameprot_H-paniculata_contig9353.17128.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length165
Homology
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BLAST of mRNA_H-paniculata_contig9353.17128.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.000e-32
Identity = 91/167 (54.49%), Postives = 102/167 (61.08%), Query Frame = 0 
Query:    1 QNVSDEPVSVKVCVAPAVEVAGLLSLGAYMQHQDSSSGVYALTSADGRSSPSVSLLPGDTLDVQVECLALAGARLPPEFLPLP-PSSEEDSADT-ATIMEAGATVLAHGCSGSGTGSFCDWDLDARLMGTVRVEIALEGRLSGGPDDFSGAGEQGPVPGQGEGTLIE 165
            +NVS E VSV + V PA EV G+LSLGA MQ QDSS+GVYA   ADGRSSP V+LLPGD LDVQ ECLAL GARLPPE +P P P+  E+   T AT+  A  T               DW    RLMGTVRVEIALE  L        G G+ G   GQ EG L+E
Sbjct: 2045 KNVSGETVSVMLGVTPAPEVVGVLSLGASMQ-QDSSTGVYASVGADGRSSPPVALLPGDVLDVQAECLALPGARLPPELIPPPGPNLAEEGGGTEATMFGAPGTA--------------DWGQHMRLMGTVRVEIALED-LDDVVPGAGGGGDGGS--GQEEGVLVE 2193
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BLAST of mRNA_H-paniculata_contig9353.17128.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 3.020e-32
Identity = 92/180 (51.11%), Postives = 105/180 (58.33%), Query Frame = 0 
Query:    1 QNVSDEPVSVKVCVAPAVEVAGLLSLGAYMQHQDSSSGVYALTSADGRSSPSVSLLPGDTLDVQVECLALAGARLPPEFLPLP-PSSEEDSADTATIMEAGATVLAHGCSGSGTGSFCDWDLDARLMGTVRVEIALEGRLSGGPDDFS------GAGEQGPVP--------GQGEGTLIE 165
            +NVS E VSV + V PA EVAG+LSLGA MQ QDSS+GVYA   ADGRSSP+V+LLPGD LDVQ ECLAL GARLPPE +P P P+  E+   T   M              G  +  DW    RL+GTVRVEIALE R +G PD         GAG              GQ EG L+E
Sbjct: 3780 KNVSGETVSVMLGVMPAPEVAGVLSLGASMQ-QDSSAGVYASVGADGRSSPAVALLPGDVLDVQAECLALPGARLPPELIPPPEPNLAEEGGGTEAAM-------------FGVPATSDWGQHMRLVGTVRVEIALEDR-AGDPDQLDLDDVAPGAGXXXXXXXXXXXXXXGQEEGVLVE 3944
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9353.17128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWQ8_9PHAE3.000e-3254.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHH6_ECTSI3.020e-3251.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9353contigH-paniculata_contig9353:5286..5780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9353.17128.1mRNA_H-paniculata_contig9353.17128.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9353 5286..5782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9353.17128.1 ID=prot_H-paniculata_contig9353.17128.1|Name=mRNA_H-paniculata_contig9353.17128.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp
QNVSDEPVSVKVCVAPAVEVAGLLSLGAYMQHQDSSSGVYALTSADGRSS
PSVSLLPGDTLDVQVECLALAGARLPPEFLPLPPSSEEDSADTATIMEAG
ATVLAHGCSGSGTGSFCDWDLDARLMGTVRVEIALEGRLSGGPDDFSGAG
EQGPVPGQGEGTLIE
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