prot_H-paniculata_contig9353.17127.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9353.17127.1
Unique Nameprot_H-paniculata_contig9353.17127.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length393
Homology
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BLAST of mRNA_H-paniculata_contig9353.17127.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 4.860e-36
Identity = 93/200 (46.50%), Postives = 116/200 (58.00%), Query Frame = 0 
Query:  190 SMTRCGPTFTVAANATRRLRLGIRPGLLTDPLPVGVVEDGRAVPFDGFVALA-----CADNDVR--------EASMYDEQ--ESAETKIDEVRVPTVPDRVNFSDTMTWARCSVASQILPVLQQPQAS-HSPRLVKLVRTVGTYCRPRFDVVGPAAIDLGNVGHTASRRGRRRFNVTLRNLSDMPVPVGVAGMSPELEVI 373
            S+TRCGP  ++ A AT  +RL IR G LT PLP   VE+G+AV FDG VA A     CA + V          A +Y++Q  E       + R   +P+RV          CS +         P     +P LVKL+R VGT+CRPRF+VVG   +DLGNVGHT SRRGRRRF V LR+L D  VPVG+ G+SPELEV+
Sbjct: 1626 SLTRCGPAVSLPARATAVVRLCIRTGELTAPLPTAAVENGKAVGFDGIVAFARIGGDCASSVVAANGTSAAARAGLYEQQFGERRAAVPGDTRALLLPERVY---------CSGSGATTGEEDNPSPEVRAPPLVKLLRAVGTFCRPRFEVVGTPNVDLGNVGHTKSRRGRRRFEVRLRSLCDTAVPVGMVGISPELEVV 1816
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BLAST of mRNA_H-paniculata_contig9353.17127.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 2.510e-34
Identity = 90/200 (45.00%), Postives = 112/200 (56.00%), Query Frame = 0 
Query:  190 SMTRCGPTFTVAANATRRLRLGIRPGLLTDPLPVGVVEDGRAVPFDGFVALA-----CADN--------DVREASMYDEQESAETKI--DEVRVPTVPDRVNFSDTMTWARCSVASQILPVLQQPQAS-HSPRLVKLVRTVGTYCRPRFDVVGPAAIDLGNVGHTASRRGRRRFNVTLRNLSDMPVPVGVAGMSPELEVI 373
            S+TRCGP  ++ A AT  +RL IR G LT PLP   VE G+AV FDG VA A     CA +            A +Y++Q          + R   +P+RV          C   +        P     +P LVKL+R VGT+CRPRF+VVG   +DLGNVGHT SRRGRRRF V LR+L D  VPVG+ G+SPELEV+
Sbjct: 3358 SLTRCGPAVSLPARATAVVRLCIRTGELTAPLPTAAVESGKAVDFDGIVAFARIGGACASSVAVGNATAAAARAGLYEQQFGGRRAAVPGDTRALFLPERVYC--------CGSGATTDGEEDDPSPEVRAPPLVKLLRAVGTFCRPRFEVVGTPNVDLGNVGHTKSRRGRRRFEVRLRSLCDTAVPVGMVGISPELEVV 3549
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9353.17127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWQ8_9PHAE4.860e-3646.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHH6_ECTSI2.510e-3445.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9353contigH-paniculata_contig9353:3456..4634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9353.17127.1mRNA_H-paniculata_contig9353.17127.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9353 3456..4636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9353.17127.1 ID=prot_H-paniculata_contig9353.17127.1|Name=mRNA_H-paniculata_contig9353.17127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=393bp
DSEGPQGKGAGLRGNGDEEEEDDDDDDRELEDSDRPWSGGEPFELSPVNV
LRRLSVTDEMAQGDQEAGDEFEDDPAAATTSDLEFRVTNRLNRPVVLASY
SNLPLRIAPVARRRKIDADRDFAGFSVSFSDEDSGPNWGHGGSRHRRNKS
PGVCRTKETSYVDGWEQEQGTPVTTPTEWKQQHLRDSELSMTRCGPTFTV
AANATRRLRLGIRPGLLTDPLPVGVVEDGRAVPFDGFVALACADNDVREA
SMYDEQESAETKIDEVRVPTVPDRVNFSDTMTWARCSVASQILPVLQQPQ
ASHSPRLVKLVRTVGTYCRPRFDVVGPAAIDLGNVGHTASRRGRRRFNVT
LRNLSDMPVPVGVAGMSPELEVIDGSIATGEITESQRSATLSS
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