prot_H-paniculata_contig9337.17117.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9337.17117.1
Unique Nameprot_H-paniculata_contig9337.17117.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length351
Homology
BLAST of mRNA_H-paniculata_contig9337.17117.1 vs. uniprot
Match: A0A6H5JZ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ72_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 4.910e-19
Identity = 113/373 (30.29%), Postives = 159/373 (42.63%), Query Frame = 0
Query:    1 MEQVLQGVRGMRQSMSTLQRTRTQVTFGCAMAASLIDTATAVQGVLAAISDGDTIWHRHNLLLPLS------KPPRDIQVRSRAAGTSGGTAVAAGEGWEWVSSASGKSVSP--------REARDRAVERLSRAVEVLILEYDKARKRIVFGLDEQGRTLGEQQG---ENGVGGAAKGGDGEETRDEETD-ISHLGLTFRSPSRSLSNVKSHGGVVEHGY-RDPEEKSIKDEI-------------PTHVMSMEERHRVGGQPEMARGAFFFSLQALCNMLIKTTSMR----RPAKISVAS-YVLPGLWTAVRPPPELWNMIMTARRFAGLNLFRVGEQREPESGEADVTTTPVPVATSAVGAASGKLHAPKR 336
            MEQVLQGVRGM QSM  + RTR QV+F   + +SL D + AV   L A S       R + LLP S      +    I   S     +                                + +   A  RL  AV  ++ +Y +ARK +++GLD+ GR L E      E   GG +     E    E+   +S      R+ S ++S +K+       G     +E  + DEI             P HV+ M+ER ++G    MARGAF FSL  LC+ L K    R    RP++ + A+ +++ GLWTA+RPPP L   + +    AGL   R    R   S         V +A   +GA SG +    R
Sbjct:   39 MEQVLQGVRGMLQSMVDMHRTRAQVSFSRVVGSSLRDVSKAVDLTLEATS-------RRSALLPASILACCHRDALGIMTTSSVGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQSSLLEATGRLEEAVSRMMKDYQRARKEVLYGLDDLGRPLEEVASLGREVDRGGRSPSIPREPVSLEDLQSLSKREKLPRTGSINISVLKNGLSTTAGGVPASSKEAQVSDEIAGRRKERDPLGGVPNHVLVMKERQKLGSSATMARGAFLFSLSGLCSALTKKRVSRAGGWRPSQSAEAARFIISGLWTAIRPPPGLLGALSST---AGLLAPRCCRPRGSSSSRGH--RRKVKLALKRLGARSGPVSPTSR 399          
BLAST of mRNA_H-paniculata_contig9337.17117.1 vs. uniprot
Match: D8LD61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD61_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 3.520e-14
Identity = 65/207 (31.40%), Postives = 94/207 (45.41%), Query Frame = 0
Query:  116 RLSRAVEVLILEYDKARKRIVFGLDEQGRTLGEQQGENGVGGAAKGGDGEETRDEET--DISHLGLTFRSP---SRSLSNVKSHGGVVEHGYRDPEEKSIKDE--------------IPTHVMSMEERHRVGGQPEMARGAFFFSLQALCNMLIK-----TTSMRRPAKISVASYVLPGLWTAVRPPPELWNMIMTARRFAGLNLFR 298
            RL  AV  ++ +Y +ARK +++GLD+ GR L E+   +G    + G      RD  +  D+  L      P   S +LS +K+       G     +++   E              +P HV+ M+ER ++G    MARGAF FSL  LC+ L K     T   R       A +V  GLWTA+RPPP L   + +   F     FR
Sbjct:  466 RLEEAVSRMMKDYQRARKEVLYGLDDLGRPL-EEVASSGREVDSGGRSPSLPRDPVSLEDLQSLSKRINLPRTGSINLSGLKNGLSTTAGGLPARSKEAEVSEGIGGRRREGDPLGGVPNHVLVMKERQKLGSAATMARGAFLFSLSGLCSALTKKRVNRTGGWRPSQSAEAARFVFSGLWTAIRPPPGLLGALSSTPGFLAARCFR 671          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9337.17117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZ72_9PHAE4.910e-1930.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD61_ECTSI3.520e-1431.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9337contigH-paniculata_contig9337:4423..7538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9337.17117.1mRNA_H-paniculata_contig9337.17117.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9337 4416..7538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9337.17117.1 ID=prot_H-paniculata_contig9337.17117.1|Name=mRNA_H-paniculata_contig9337.17117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=351bp
MEQVLQGVRGMRQSMSTLQRTRTQVTFGCAMAASLIDTATAVQGVLAAIS
DGDTIWHRHNLLLPLSKPPRDIQVRSRAAGTSGGTAVAAGEGWEWVSSAS
GKSVSPREARDRAVERLSRAVEVLILEYDKARKRIVFGLDEQGRTLGEQQ
GENGVGGAAKGGDGEETRDEETDISHLGLTFRSPSRSLSNVKSHGGVVEH
GYRDPEEKSIKDEIPTHVMSMEERHRVGGQPEMARGAFFFSLQALCNMLI
KTTSMRRPAKISVASYVLPGLWTAVRPPPELWNMIMTARRFAGLNLFRVG
EQREPESGEADVTTTPVPVATSAVGAASGKLHAPKRCARCWGVGTTFWAF
K
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