prot_H-paniculata_contig93.17077.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig93.17077.1
Unique Nameprot_H-paniculata_contig93.17077.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length143
Homology
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BLAST of mRNA_H-paniculata_contig93.17077.1 vs. uniprot
Match: D8LTK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK2_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 3.200e-29
Identity = 69/147 (46.94%), Postives = 97/147 (65.99%), Query Frame = 0 
Query:    1 VQEKRKVCPTCEVEYRKPRTWTGVRKEFLKRLEKCEKSKQAALGAAIAKQEQEQEFITRSVTPTSQRWHE----DGVFWEDVEDDFMSRLQEDALRRQISLQSRSKSLHPDCTFRTKVSRASERFVEKSSWSGAHQAIIMTDAAYPA 143
            V+EKRK+C  CE EYRKP+TW  VRK+FL R+E  ++SK+ A+ AA   +        R+    S R ++    + +FWED+EDDF+ RLQEDA RRQ SL+SRS +L+ D TFR  +S ASER V++S+W+G+   ++ T    PA
Sbjct:  383 VEEKRKICXNCEAEYRKPKTWASVRKDFLNRVEAFQESKREAVQAATQSR-------MRTFALGSHRSYDGAERERLFWEDIEDDFVYRLQEDAARRQESLESRSAALYQDWTFRPTLSAASERVVDESAWAGSFSELLYTFRLSPA 522
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BLAST of mRNA_H-paniculata_contig93.17077.1 vs. uniprot
Match: A0A6H5JHI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI1_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 2.140e-18
Identity = 59/143 (41.26%), Postives = 78/143 (54.55%), Query Frame = 0 
Query:    1 VQEKRKVCPTCEVEYRKPRTWTGVRKEFLKRLEKCEKSKQAALGAAIAKQEQEQEFITRSVTPTSQRWHEDGVFWEDVEDDFMSRLQEDALRRQISLQSRSKSLHPDCTFRTKVSRASERFVEKSSWSGAHQAIIMTDAAYPA 143
            V+EKRK+    E EYRKP+TW  VRK            +  ALG+  +    E E +                FWED+EDDF  RLQ DA RRQ SL+SRS +L+ D TFR  +S ASER V++S+W+G+   ++ T    PA
Sbjct:  444 VEEKRKIXXXXEAEYRKPKTWASVRK-----------IRTFALGSHRSYDGAEGERL----------------FWEDIEDDFFCRLQHDAARRQASLESRSAALYQDWTFRPTLSAASERVVDESAWAGSFSKLLYTFRLSPA 559
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig93.17077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTK2_ECTSI3.200e-2946.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHI1_9PHAE2.140e-1841.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig93contigH-paniculata_contig93:38664..41895 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig93.17077.1mRNA_H-paniculata_contig93.17077.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig93 38664..41895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig93.17077.1 ID=prot_H-paniculata_contig93.17077.1|Name=mRNA_H-paniculata_contig93.17077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
VQEKRKVCPTCEVEYRKPRTWTGVRKEFLKRLEKCEKSKQAALGAAIAKQ
EQEQEFITRSVTPTSQRWHEDGVFWEDVEDDFMSRLQEDALRRQISLQSR
SKSLHPDCTFRTKVSRASERFVEKSSWSGAHQAIIMTDAAYPA
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