prot_H-paniculata_contig9260.17050.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9260.17050.1
Unique Nameprot_H-paniculata_contig9260.17050.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
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BLAST of mRNA_H-paniculata_contig9260.17050.1 vs. uniprot
Match: D7FZ31_ECTSI (Viral A-type inclusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ31_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.150e-15
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 0 
Query:    1 ALRNACVGAASSTAELLGGDDPTGFAQEVRALAEAHARELEEAMAHEEEGDGSI 54
            ALRNACVGAASSTAELLGG+DPTGFAQEVRALA AH +ELE+AM  + EG   +
Sbjct:  165 ALRNACVGAASSTAELLGGEDPTGFAQEVRALANAHEKELEQAMVEDMEGQSDL 218
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BLAST of mRNA_H-paniculata_contig9260.17050.1 vs. uniprot
Match: A0A6H5KJI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI0_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.570e-15
Identity = 40/50 (80.00%), Postives = 46/50 (92.00%), Query Frame = 0 
Query:    1 ALRNACVGAASSTAELLGGDDPTGFAQEVRALAEAHARELEEAMAHEEEG 50
            ALRNACVGAASSTAELLGG+DPTGFAQEVRALA AH +ELE+A+  ++EG
Sbjct:  163 ALRNACVGAASSTAELLGGEDPTGFAQEVRALANAHEKELEQALVEDKEG 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9260.17050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ31_ECTSI1.150e-1575.93Viral A-type inclusion protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KJI0_9PHAE1.570e-1580.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9260contigH-paniculata_contig9260:1527..1712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9260.17050.1mRNA_H-paniculata_contig9260.17050.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9260 1527..1712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9260.17050.1 ID=prot_H-paniculata_contig9260.17050.1|Name=mRNA_H-paniculata_contig9260.17050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
ALRNACVGAASSTAELLGGDDPTGFAQEVRALAEAHARELEEAMAHEEEG
DGSICDADGQSG
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